Os02g0782500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Small heat stress protein class CIII.
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Os02g0782500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Small heat stress protein class CIII.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 496.9 | 1.05 | 10.9 | 1.22 | 4.74 | -5.5 | 1.55 | -5.74 | 0.294 | 7.04 | 0.4545 | 1543 | 16.5 | -- |
| 516.53 | 1.06 | 10.9 | 1.01 | 4.81 | -4.03 | 1.76 | -- | 0.317 | 7.02 | 0.5202 | 1554 | 16.8 | -- |
| 499.38 | 1.04 | 10.8 | 1.52 | 4.57 | -5.83 | -- | -7 | 0.389 | 6.92 | 0.4199 | 1546 | 15.6 | -- |
| 524.75 | 1.07 | 10.9 | 0.928 | 4.82 | -4.21 | -- | -- | 0.294 | 6.95 | 0.5299 | 1550 | 16.3 | -- |
| 720.72 | 1.25 | 10.9 | 1.89 | -- | -5.53 | -- | -6.48 | 0.736 | -- | 52.66 | 402 | 14.3 | -- |
| 710.06 | 1.25 | 10.8 | 1.81 | 5.1 | -- | 2.14 | -- | 0.761 | 7.2 | -- | -- | -- | -- |
| 721.81 | 1.26 | 10.8 | 1.85 | 5.11 | -- | -- | -- | 0.754 | 7.14 | -- | -- | -- | -- |
| 701.09 | 1.23 | 10.9 | 1.86 | -- | -5.4 | -- | -- | 0.772 | -- | 52.72 | 402 | 14.4 | -- |
| 539.87 | 1.08 | 10.9 | -- | 4.87 | -4.55 | -- | -- | 0.171 | 6.96 | 0.4599 | 1565 | 16.9 | -- |
| 2099.66 | 2.14 | 10.9 | 1.94 | -- | -- | -- | -- | 0.845 | -- | -- | -- | -- | -- |
| 811.73 | 1.33 | 10.9 | -- | 5.13 | -- | -- | -- | 0.549 | 7.12 | -- | -- | -- | -- |
| 787.62 | 1.31 | 11 | -- | -- | -5.44 | -- | -- | 0.673 | -- | 52.65 | 405 | 14.5 | -- |
| 2199.27 | 2.19 | 11 | -- | -- | -- | -- | -- | 0.629 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 510.90 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 2 | 511.29 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 6 | 512.62 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 9 |
| 9 | 513.39 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 10 |
| 30 | 516.52 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 12 |
| 52 | 518.04 | wind | 7 | 43200 | < th | dose independent | sin | 19 | NA |
| 71 | 519.01 | wind | 7 | 43200 | > th | dose independent | sin | 18 | NA |
| 72 | 519.02 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 13 |
| 77 | 519.22 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 21 |
| 78 | 519.23 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 17 |
| 81 | 519.30 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 4 |
| 87 | 519.46 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 112 | 520.10 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 22 |
| 127 | 520.30 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 132 | 520.39 | wind | 5 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 140 | 520.54 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 147 | 520.80 | wind | 5 | 43200 | > th | dose dependent | sin | 18 | NA |
| 159 | 521.56 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 173 | 521.79 | radiation | 1 | 1440 | < th | dose dependent | sin | 21 | NA |
| 204 | 522.26 | wind | 5 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 245 | 522.89 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 14 |
| 252 | 523.06 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 258 | 523.28 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 3 |
| 276 | 523.80 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 296 | 524.10 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 299 | 524.13 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 455 | 527.65 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 474 | 528.06 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 16 |
| 477 | 528.10 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 487 | 528.25 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 19 |
| 517 | 528.72 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 526 | 528.85 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 536 | 528.96 | radiation | 1 | 1440 | < th | dose dependent | rect. | 23 | 22 |
| 543 | 529.02 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 576 | 529.21 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 588 | 529.29 | radiation | 1 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 616 | 529.77 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 7 |
| 620 | 529.87 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 15 |
| 637 | 530.04 | temperature | 25 | 1440 | > th | dose dependent | sin | 21 | NA |
| 660 | 530.24 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 728 | 530.78 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 22 |
| 790 | 531.18 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 22 |
| 802 | 531.23 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 880 | 531.66 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 886 | 531.70 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 887 | 531.71 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 977 | 532.46 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 22 |