BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0782500 Os02g0782500|AK119261
(172 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G54050.1 | chr1:20179558-20180122 REVERSE LENGTH=156 106 5e-24
AT5G12020.1 | chr5:3882409-3882876 REVERSE LENGTH=156 84 3e-17
AT5G12030.1 | chr5:3884214-3884684 REVERSE LENGTH=157 77 6e-15
AT1G53540.1 | chr1:19980510-19980983 FORWARD LENGTH=158 70 4e-13
AT1G59860.1 | chr1:22031474-22031941 FORWARD LENGTH=156 64 3e-11
AT1G07400.1 | chr1:2275148-2275621 FORWARD LENGTH=158 64 6e-11
AT5G59720.1 | chr5:24062632-24063117 FORWARD LENGTH=162 60 8e-10
AT4G10250.1 | chr4:6370537-6371124 FORWARD LENGTH=196 59 2e-09
AT2G29500.1 | chr2:12633279-12633740 REVERSE LENGTH=154 57 5e-09
AT3G46230.1 | chr3:16984263-16984733 REVERSE LENGTH=157 57 6e-09
AT4G21870.1 | chr4:11603756-11604285 REVERSE LENGTH=135 57 7e-09
AT5G37670.1 | chr5:14969035-14969448 FORWARD LENGTH=138 55 2e-08
AT4G27670.1 | chr4:13819048-13819895 REVERSE LENGTH=228 47 4e-06
>AT1G54050.1 | chr1:20179558-20180122 REVERSE LENGTH=156
Length = 155
Score = 106 bits (265), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 81/123 (65%), Gaps = 4/123 (3%)
Query: 50 GIGGGAPVDIMETPGEYAFVLDVPGLSKSDIQVTLEEDRVLVMKSSNGAGNXXXXXXXXX 109
G P+DI+E+P EY F LD+PG+SKSDIQVT+EE+R LV+KS+ G
Sbjct: 37 GSSNNIPIDILESPKEYIFYLDIPGISKSDIQVTVEEERTLVIKSN---GKRKRDDDESE 93
Query: 110 XXCKYIRLERRASPRAFARKFRLPEDADTGGISARCENGVLTVTVKKRPPPEKKTKSVQV 169
KYIRLERR + + +KFRLPEDAD ++A+ + GVLTV +KK PP K K+VQ+
Sbjct: 94 EGSKYIRLERRLA-QNLVKKFRLPEDADMASVTAKYQEGVLTVVIKKLPPQPPKPKTVQI 152
Query: 170 TIA 172
++
Sbjct: 153 AVS 155
>AT5G12020.1 | chr5:3882409-3882876 REVERSE LENGTH=156
Length = 155
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 8/103 (7%)
Query: 53 GGAPVDIMETPGEYAFVLDVPGLSKSDIQVTLEEDRVLVMKSSNGAGNXXXXXXXXXXXC 112
P D++E P YAFV+D+PG+ +I+V +E D VLV+ N
Sbjct: 43 AATPADVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEG------V 96
Query: 113 KYIRLERRASPRAFARKFRLPEDADTGGISARCENGVLTVTVK 155
KY+R+ERR F RKF+LPE+AD ISA C +GVL VTV+
Sbjct: 97 KYVRMERRMG--KFMRKFQLPENADLDKISAVCHDGVLKVTVQ 137
>AT5G12030.1 | chr5:3884214-3884684 REVERSE LENGTH=157
Length = 156
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 53 GGAPVDIMETPGEYAFVLDVPGLSKSDIQVTLEEDRVLVMKSSNGAGNXXXXXXXXXXXC 112
P D++E P Y F +D+PG+ +IQV +E + VLV+ N
Sbjct: 44 AATPADVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLVVSGKRQRDNKENEG------V 97
Query: 113 KYIRLERRASPRAFARKFRLPEDADTGGISARCENGVLTVTV 154
K++R+ERR F RKF+LP++AD ISA C +GVL VT+
Sbjct: 98 KFVRMERRMG--KFMRKFQLPDNADLEKISAACNDGVLKVTI 137
>AT1G53540.1 | chr1:19980510-19980983 FORWARD LENGTH=158
Length = 157
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 54 GAPVDIMETPGEYAFVLDVPGLSKSDIQVTLEEDRVLVMKSSNGAGNXXXXXXXXXXXCK 113
A VD ETP + F D+PGL K +++V +E+ +L + N K
Sbjct: 49 NAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKND-------K 101
Query: 114 YIRLERRASPRAFARKFRLPEDADTGGISARCENGVLTVTVKKRPPPEKKTKSVQVT 170
+ R+ER + F R+FRLPE+A I A ENGVL+VTV K P + + KS+ ++
Sbjct: 102 WHRVERSSG--KFTRRFRLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDIS 156
>AT1G59860.1 | chr1:22031474-22031941 FORWARD LENGTH=156
Length = 155
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Query: 53 GGAPVDIMETPGEYAFVLDVPGLSKSDIQVTLEEDRVLVMKSSNGAGNXXXXXXXXXXXC 112
A VD ET + F D+PG+ K +++V +E+D VL +
Sbjct: 44 ANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDT------ 97
Query: 113 KYIRLERRASPRAFARKFRLPEDADTGGISARCENGVLTVTVKKRPPPEKKTKSVQVTIA 172
+ R+ER S F+RKFRLPE+ + A ENGVLTVTV K +KK + + I+
Sbjct: 98 -WHRVER--SSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPKVETNKKKAQVKSIDIS 154
>AT1G07400.1 | chr1:2275148-2275621 FORWARD LENGTH=158
Length = 157
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 54 GAPVDIMETPGEYAFVLDVPGLSKSDIQVTLEEDRVLVMKSSNGAGNXXXXXXXXXXXCK 113
A VD ET + F D+PG+ K +++V +E+D VL +
Sbjct: 47 NARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDT------- 99
Query: 114 YIRLERRASPRAFARKFRLPEDADTGGISARCENGVLTVTVKKRPPPEKKTKSVQVTIA 172
+ R+ER S F+RKF+LPE+ + A ENGVLTVTV K +KK + + I+
Sbjct: 100 WHRVER--SSGQFSRKFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDIS 156
>AT5G59720.1 | chr5:24062632-24063117 FORWARD LENGTH=162
Length = 161
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 54 GAPVDIMETPGEYAFVLDVPGLSKSDIQVTLEEDRVLVMKSSNGAGNXXXXXXXXXXXCK 113
A VD ETP + F D+PGL K +++V +E+ VL + N K
Sbjct: 51 NARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKND-------K 103
Query: 114 YIRLERRASPRAFARKFRLPEDADTGGISARCENGVLTVTVKKRPPPEKKTKSVQVTIA 172
+ R+ER + F R+FRLPE+A + A ENGVLTV V K P + + KS+ ++ A
Sbjct: 104 WHRVERASG--KFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISGA 160
>AT4G10250.1 | chr4:6370537-6371124 FORWARD LENGTH=196
Length = 195
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 55 APVDIMETPGEYAFVLDVPGLSKSDIQVTLEEDRVLVMKSSNGAGNXXXXXXXXXXXCKY 114
A VD ET + +LD+PGL K ++++ +EE+ VL + ++
Sbjct: 71 ARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGER-------KREEEKKGDQW 123
Query: 115 IRLERRASPRAFARKFRLPEDADTGGISARCENGVLTVTVKKRPPPEKK 163
R+ER S F R+F+LP++ D + A+ ENGVLT+ + K P + K
Sbjct: 124 HRVER--SYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLSPEKVK 170
>AT2G29500.1 | chr2:12633279-12633740 REVERSE LENGTH=154
Length = 153
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 54 GAPVDIMETPGEYAFVLDVPGLSKSDIQVTLEEDRVLVMKSSNGAGNXXXXXXXXXXXCK 113
A VD ETP + F D+PGL K +++V +EED VL +
Sbjct: 45 NARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDT------- 97
Query: 114 YIRLERRASPRAFARKFRLPEDADTGGISARCENGVLTVTVKKRPPPEKKTKSVQVT 170
+ R+ER S F R+FRLPE+ + A ENGVLTVTV K + KS+Q++
Sbjct: 98 WHRVER--SSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQIS 152
>AT3G46230.1 | chr3:16984263-16984733 REVERSE LENGTH=157
Length = 156
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 54 GAPVDIMETPGEYAFVLDVPGLSKSDIQVTLEEDRVLVMKSSNGAGNXXXXXXXXXXXCK 113
A VD ETP + F DVPGL K +++V +E+ +L + + N
Sbjct: 48 NAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDT------- 100
Query: 114 YIRLERRASPRAFARKFRLPEDADTGGISARCENGVLTVTVKKRPPPEKKTKSVQVT 170
+ R+ER S F R+FRLPE+A + A ENGVL+VTV K + + KSV ++
Sbjct: 101 WHRVER--SSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDIS 155
>AT4G21870.1 | chr4:11603756-11604285 REVERSE LENGTH=135
Length = 134
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 17/97 (17%)
Query: 61 ETPGEYAFVLDVPGLSKSDIQVTLEEDRVLVMKSSNGAGNXXXXXXXXXXXCKYIRLERR 120
++P + F +D+PGL K +I+V +E+ L++++ +
Sbjct: 32 QSPDSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEATPMSPPDQPL-------------- 77
Query: 121 ASPRAFARKFRLPEDADTGGISARCENGVLTVTVKKR 157
+ F RKFRLPE D GISA E+GVLTV V KR
Sbjct: 78 ---KTFKRKFRLPESIDMIGISAGYEDGVLTVIVPKR 111
>AT5G37670.1 | chr5:14969035-14969448 FORWARD LENGTH=138
Length = 137
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 55 APVDIMETPGEYAFVLDVPGLSKSDIQVTLEEDRVLVMKSSNGAGNXXXXXXXXXXXCKY 114
A +D ME+ + F ++VPG +K DI+V +EE VL ++ G G +
Sbjct: 22 ALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIR---GEG----IKEEKKENLVW 74
Query: 115 IRLERRASP---RAFARKFRLPEDADTGGISARCENGVLTVTV-KKRPPPEKKTKSVQVT 170
ER A F R+ LPE+ + A ENGVLTV V K K ++V +T
Sbjct: 75 HVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTVVVPKDTSSKSSKVRNVNIT 134
>AT4G27670.1 | chr4:13819048-13819895 REVERSE LENGTH=228
Length = 227
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 55 APVDIMETPGEYAFVLDVPGLSKSDIQVTLEEDRVLVMKSSNGAGNXXXXXXXXXXXCKY 114
AP DI E E D+PGLSK D+++++ ED VLV+K +
Sbjct: 127 APWDIKEEEHEIKMRFDMPGLSKEDVKISV-EDNVLVIKGEQKKEDSDDSWSGR------ 179
Query: 115 IRLERRASPRAFARKFRLPEDADTGGISARCENGVLTVTVKKRPPPEKKTKSVQV 169
S ++ + +LP++ + I A +NGVL +T+ K E+K VQ+
Sbjct: 180 -------SVSSYGTRLQLPDNCEKDKIKAELKNGVLFITIPKT-KVERKVIDVQI 226
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.135 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,920,069
Number of extensions: 93243
Number of successful extensions: 251
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 237
Number of HSP's successfully gapped: 13
Length of query: 172
Length of database: 11,106,569
Length adjustment: 92
Effective length of query: 80
Effective length of database: 8,584,297
Effective search space: 686743760
Effective search space used: 686743760
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 108 (46.2 bits)