Os02g0775600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, C2H2-type domain containing protein.
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Os02g0775600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, C2H2-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.18 | 0.489 | 11.7 | -3.59 | 1.18 | 1.04 | 0.0486 | -1.55 | -1.25 | 6.46 | 26.02 | 830 | -- | -- |
| 110.35 | 0.489 | 11.6 | -3.18 | 1.18 | 0.91 | 0.438 | -- | -1.16 | 6.43 | 25.6 | 783 | -- | -- |
| 108.19 | 0.484 | 11.7 | -3.6 | 1.18 | 1.04 | -- | -1.57 | -1.25 | 6.46 | 26.01 | 831 | -- | -- |
| 110.8 | 0.49 | 11.6 | -3.17 | 1.18 | 0.896 | -- | -- | -1.16 | 6.4 | 25.6 | 778 | -- | -- |
| 152.23 | 0.575 | 11.7 | -3.6 | -- | 0.898 | -- | -1.21 | -1.18 | -- | 26.1 | 2636 | -- | -- |
| 135.16 | 0.545 | 11.6 | -2.9 | 0.915 | -- | 0.0736 | -- | -0.85 | 5.21 | -- | -- | -- | -- |
| 135.17 | 0.544 | 11.6 | -2.9 | 0.916 | -- | -- | -- | -0.85 | 5.2 | -- | -- | -- | -- |
| 152.84 | 0.576 | 11.6 | -3.22 | -- | 0.97 | -- | -- | -1.1 | -- | 24.72 | 2732 | -- | -- |
| 356.62 | 0.884 | 11.5 | -- | 0.95 | 0.121 | -- | -- | -0.568 | 5.1 | 25.6 | 778 | -- | -- |
| 179.02 | 0.625 | 11.6 | -2.87 | -- | -- | -- | -- | -0.827 | -- | -- | -- | -- | -- |
| 357.57 | 0.885 | 11.5 | -- | 0.866 | -- | -- | -- | -0.527 | 5.32 | -- | -- | -- | -- |
| 388.1 | 0.921 | 11.5 | -- | -- | -0.347 | -- | -- | -0.493 | -- | 28.84 | 1245 | -- | -- |
| 396.71 | 0.93 | 11.5 | -- | -- | -- | -- | -- | -0.509 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 105.53 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 2 | 105.79 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 11 | 8 |
| 3 | 105.86 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 5 | 105.93 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 10 | 9 |
| 10 | 106.19 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 12 | 106.25 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 14 | 106.55 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 21 |
| 17 | 106.70 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 55 | 107.33 | temperature | 20.0 | 720 | > th | dose dependent | sin | 21 | NA |
| 65 | 107.56 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 12 | 5 |
| 86 | 108.15 | temperature | 25.0 | 720 | > th | dose independent | rect. | 7 | 15 |
| 89 | 108.17 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 8 | 14 |
| 98 | 108.33 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 103 | 108.41 | temperature | 25.0 | 720 | > th | dose independent | sin | 21 | NA |
| 121 | 108.61 | temperature | 25.0 | 720 | > th | dose independent | rect. | 7 | 18 |
| 122 | 108.61 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 124 | 108.62 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 166 | 108.78 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 181 | 108.82 | temperature | 25.0 | 720 | > th | dose independent | rect. | 10 | 10 |
| 207 | 108.90 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 11 | 18 |
| 213 | 108.93 | temperature | 25.0 | 720 | < th | dose independent | rect. | 4 | 20 |
| 232 | 109.00 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 9 |
| 269 | 109.20 | temperature | 25.0 | 720 | > th | dose independent | rect. | 3 | 19 |
| 335 | 109.56 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 344 | 109.59 | atmosphere | 1000.0 | 43200 | < th | dose dependent | sin | 11 | NA |
| 347 | 109.60 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 357 | 109.63 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 10 |
| 379 | 109.74 | temperature | 25.0 | 270 | < th | dose independent | rect. | 11 | 21 |
| 398 | 109.84 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 418 | 109.92 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 426 | 109.94 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 437 | 109.97 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 3 |
| 451 | 110.04 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 470 | 110.10 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 480 | 110.13 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 530 | 110.28 | temperature | 25.0 | 270 | < th | dose independent | rect. | 12 | 9 |
| 555 | 110.34 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 575 | 110.41 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 603 | 110.47 | temperature | 25.0 | 720 | < th | dose independent | sin | 21 | NA |
| 628 | 110.55 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 20 | 7 |
| 651 | 110.59 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 20 | 8 |
| 654 | 110.59 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 671 | 110.65 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 10 |
| 682 | 110.67 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 15 | 10 |
| 733 | 110.75 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 740 | 110.77 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 8 |
| 777 | 110.84 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 14 | 13 |
| 779 | 110.84 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 17 |
| 781 | 110.84 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 786 | 110.85 | temperature | 25.0 | 720 | > th | dose dependent | no | NA | NA |
| 793 | 110.86 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 800 | 110.86 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 823 | 110.90 | temperature | 25.0 | 720 | > th | dose independent | no | NA | NA |
| 826 | 110.90 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 11 | 3 |
| 849 | 110.93 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 17 |
| 875 | 110.97 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 14 | 13 |
| 912 | 111.02 | temperature | 20.0 | 10 | > th | dose dependent | sin | 15 | NA |
| 948 | 111.07 | wind | 5.0 | 43200 | > th | dose independent | sin | 0 | NA |
| 976 | 111.11 | wind | 5.0 | 43200 | < th | dose independent | sin | 0 | NA |
| 980 | 111.11 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 13 |
| 993 | 111.12 | temperature | 25.0 | 720 | > th | dose independent | rect. | 10 | 23 |