Os02g0772500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein prenyltransferase domain containing protein.
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Os02g0772500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein prenyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.24 | 0.267 | 9.82 | -0.47 | 0.424 | 0.604 | -0.0821 | 0.923 | 0.0239 | 6.11 | 21.4 | 1769 | -- | -- |
| 34.1 | 0.272 | 9.86 | -0.652 | 0.404 | 0.494 | -0.127 | -- | -0.0275 | 6.27 | 22.1 | 1934 | -- | -- |
| 32.25 | 0.264 | 9.82 | -0.469 | 0.423 | 0.605 | -- | 0.929 | 0.0244 | 6.15 | 21.45 | 1769 | -- | -- |
| 34.09 | 0.272 | 9.86 | -0.677 | 0.422 | 0.495 | -- | -- | -0.0386 | 6.24 | 22.04 | 1860 | -- | -- |
| 40.76 | 0.297 | 9.84 | -0.497 | -- | 0.618 | -- | 0.786 | 0.00951 | -- | 21.4 | 1423 | -- | -- |
| 42.63 | 0.306 | 9.82 | -0.473 | 0.411 | -- | -0.202 | -- | 0.125 | 6.01 | -- | -- | -- | -- |
| 42.72 | 0.306 | 9.82 | -0.474 | 0.41 | -- | -- | -- | 0.126 | 6.14 | -- | -- | -- | -- |
| 42.22 | 0.303 | 9.87 | -0.666 | -- | 0.519 | -- | -- | -0.0437 | -- | 22.1 | 1380 | -- | -- |
| 45.21 | 0.313 | 9.83 | -- | 0.381 | 0.308 | -- | -- | 0.0806 | 6.29 | 24.6 | 1492 | -- | -- |
| 51.43 | 0.335 | 9.83 | -0.463 | -- | -- | -- | -- | 0.135 | -- | -- | -- | -- | -- |
| 48.65 | 0.326 | 9.81 | -- | 0.403 | -- | -- | -- | 0.179 | 6.2 | -- | -- | -- | -- |
| 52.11 | 0.336 | 9.84 | -- | -- | 0.307 | -- | -- | 0.067 | -- | 22.4 | 1380 | -- | -- |
| 57.07 | 0.353 | 9.82 | -- | -- | -- | -- | -- | 0.186 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.27 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 3 | 32.30 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 4 | 32.30 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 4 |
| 12 | 32.48 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 13 | 32.51 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 22 | 32.65 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 25 | 32.70 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 31 | 32.85 | wind | 3 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 38 | 32.95 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 40 | 32.95 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 16 |
| 47 | 33.00 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 55 | 33.02 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 63 | 33.04 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 92 | 33.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 96 | 33.12 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 2 |
| 102 | 33.13 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 131 | 33.21 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 137 | 33.22 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 151 | 33.25 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 211 | 33.38 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 303 | 33.53 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 348 | 33.61 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 359 | 33.62 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 386 | 33.66 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 434 | 33.75 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 435 | 33.75 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 467 | 33.80 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 475 | 33.80 | temperature | 25 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 484 | 33.81 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 509 | 33.86 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 8 |
| 595 | 33.94 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 606 | 33.95 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 607 | 33.95 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 661 | 34.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 662 | 34.01 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 8 |
| 693 | 34.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 822 | 34.12 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 12 |
| 908 | 34.19 | temperature | 20 | 4320 | > th | dose independent | sin | 16 | NA |
| 915 | 34.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 18 |
| 974 | 34.24 | wind | 3 | 1440 | < th | dose independent | rect. | 2 | 1 |