BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0772500 Os02g0772500|AK100349
(1164 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G17740.1 | chr3:6068003-6072814 REVERSE LENGTH=1150 900 0.0
AT3G17712.2 | chr3:6056890-6060225 FORWARD LENGTH=857 520 e-147
>AT3G17740.1 | chr3:6068003-6072814 REVERSE LENGTH=1150
Length = 1149
Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/1021 (48%), Positives = 677/1021 (66%), Gaps = 27/1021 (2%)
Query: 157 TKLAKDYYFDAKGDQDNLAFGSIYRMDIARYK---SQNMPEARGLKRLLFHNLGVSVHMG 213
+K KDYY D + D DNLA+GSIYRM++ RYK SQ +P G R N S+ +
Sbjct: 134 SKPVKDYYLDTRPDPDNLAYGSIYRMNVPRYKLDNSQRVP-GSGSLRFYLRNRRSSM-LD 191
Query: 214 HESDLDGLNSKARAGGRYYSAKYAVVERNKGFKHLKVLKKDNSAILP--EDFIPL----G 267
E D+D L +A++ RY+ AK+A +ERNK FK ++ L + A+ ++FIPL
Sbjct: 192 TEIDIDSLEGRAKSDTRYWYAKHAAMERNKNFKRIR-LSAASEAVDSSFDNFIPLEEDVT 250
Query: 268 IPSLPENNT-TGEQELEESWEDEILRRTREFNKMSREFPHNEKIWLDFARFQDKVASTQP 326
+P E + + + + SWEDE+L +TREFN+++RE PH+ K WL FA FQDKV+S Q
Sbjct: 251 VPESDEEDVLSKDSMIGASWEDEVLNKTREFNRVTRERPHDAKAWLAFADFQDKVSSMQS 310
Query: 327 QKAARLQTTERKISILEKAVELNPDNEELLLYLLKAYGERDSTQNLLDKWEQILMKHPDS 386
QK RLQT E+KISILEKA ELNPD+EELLL LLKAY RD+ L+ +WE+ LM++ S
Sbjct: 311 QKGVRLQTLEKKISILEKAFELNPDSEELLLALLKAYRSRDNADVLISRWEKALMQNSAS 370
Query: 387 CKLWKQYLLLCQGEFSRFKVSDLRKSYAYAVQALSAACTKLCRQ-DTQYDRLEPKYSSLI 445
KLW+++L + QGEFSRFKVS++R+ Y+YA+QALS+AC+K RQ DT EP S+ I
Sbjct: 371 YKLWREFLCVVQGEFSRFKVSEVRRLYSYAIQALSSACSKRHRQVDTTS---EPLDSAAI 427
Query: 446 HLELGLVDIFVNLCRFEWHTGHRELATALFQAQIEFSLFSPPLHLTTSSKQRLFEHFWNN 505
EL LVD+ V+LCRFEW G++ELATAL QA++EFS+FSP L LT SK RLFEHFW++
Sbjct: 428 QQELVLVDMLVSLCRFEWQAGYQELATALLQAEVEFSIFSPSLLLTEQSKLRLFEHFWSS 487
Query: 506 GGARIGEDGALGWSRWLAKDEESRQNIDIQENTQETERGGWSGWFDP-SLRTNSETSKVE 564
GAR+GE+GA GW WL K+EE+RQ I +E++ + E GGW+GW + S R + +
Sbjct: 488 NGARVGEEGAFGWLLWLEKEEENRQKILKEESSDDNEVGGWTGWTEQVSGRNGDDIASAN 547
Query: 565 PSTSD----GNDAENPDDEDPSAQEDVESLLKKLGIDGDADYNSEVKDPKTWNRWSFMEL 620
D G D E +DE+ ++D E++LK LGID + + EVKD TW +W E+
Sbjct: 548 TGEVDVDRKGLD-EEMEDENSKPEDDTEAMLKLLGIDVNTAASDEVKDTSTWVKWFEEEV 606
Query: 621 SRDNEQWMPLHEKLGSLYS-DDAPTGEDNDQLSRVILFEDITEFLFSLSSEEARFSLICQ 679
SRD+ QWMP K G S + GED +QLS V+L+EDI +LFSL S+EAR SL+ Q
Sbjct: 607 SRDHSQWMPTR-KAGEFSSVEGMGEGEDEEQLSSVVLYEDINGYLFSLRSKEARLSLVYQ 665
Query: 680 FIDFYGGKISRWTSTNSSSWIDRNLSLEMITDDIQEDLSTVSNLIDKNQTSVHNKMVSLL 739
FIDF+G IS WTS+NS SW ++ SLE +D + E+L +V + K+ ++ + SLL
Sbjct: 666 FIDFFGAHISPWTSSNSLSWSEKISSLETFSDSMLENLRSVHECLSKSDSANCFSLGSLL 725
Query: 740 GTMHEFSQRPGTAKFLKNAILLFLDVFPRNHILEEAVLVTPQIHTAQEKYLATPATASRA 799
G + S R KFL+NAILL L+VFPRN+ILEEAVLV ++ K +A
Sbjct: 726 GGSCDLSMRTEMMKFLRNAILLCLNVFPRNYILEEAVLVAEELFVTNMKTCEVATMPCQA 785
Query: 800 LAKNLLKKDRQDLLLCGIYGRIEAMNGDFVKARHIFDLALSTSQGASEDLRKKVPILYFW 859
LAK LLK DRQDLLLCG+Y + EA +G+ AR +FD+AL++ G ++L+ P+L W
Sbjct: 786 LAKRLLKSDRQDLLLCGVYAQREAASGNMKHARRVFDMALTSICGLPKELQCNTPLLCLW 845
Query: 860 YAEMELA-IYASRNNSDSVDRAIHVLSCLGDKAKYASFDGSISRPQVLKARQGFKEQIRS 918
YAE E+A S +++S RA+H+L LG Y+ + S Q+L+ARQGF+E+++
Sbjct: 846 YAESEVANSSGSGRDTESSSRAMHILCYLGSGLAYSPYTSQSSSMQILRARQGFREKLKK 905
Query: 919 LRSSFASDGMKEESVALICSASLFESMTSGFASGLEVIEETFY-MTPSENNHSLEFEELW 977
++S+++ ++S AL+CSA+LFE +T+ LE++E F + P + S + E L+
Sbjct: 906 IQSTWSHGVTDDQSAALVCSAALFEELTNDLPGALEILEHMFSSVLPGRKSQSHQLELLF 965
Query: 978 MHYIXXXXXXXXXXXXXRVWPKISQGIQTYPYNPKSYAAMLTLGCLYSVSNNLRLTLDKF 1037
+Y+ ++W IS+G+Q YP NP+ Y A++ + S+ LR+ D +
Sbjct: 966 NYYVRMLQRHQDDLTLSQLWKPISEGLQLYPLNPELYRALVDICNHRMTSHKLRMMFDDY 1025
Query: 1038 NQRDPSIIGLLFALSFELCKAGSDNRIHNLFERALTDDKLQKSVLLWRCYLAYEAEIACN 1097
++++ S++ LFALS+EL K GS +RI LFERAL D SV+LWRCY+AYE +IA N
Sbjct: 1026 SRKNSSVVVWLFALSYELSKGGSSHRIRGLFERALAQDTQNNSVILWRCYIAYEIDIADN 1085
Query: 1098 ASAARRVFFRAIHACPWSKRLWLDGFEKLSSILTLKELSDLQEVMRDKELHIRTDIYEIL 1157
SAARR++FRAI+ACPWSK+LWLDGF KL S+LT KE+SDLQEVMRDKEL+IRTDIYEIL
Sbjct: 1086 PSAARRIYFRAINACPWSKKLWLDGFGKLGSVLTAKEMSDLQEVMRDKELNIRTDIYEIL 1145
Query: 1158 L 1158
L
Sbjct: 1146 L 1146
>AT3G17712.2 | chr3:6056890-6060225 FORWARD LENGTH=857
Length = 856
Score = 520 bits (1340), Expect = e-147, Method: Compositional matrix adjust.
Identities = 319/705 (45%), Positives = 431/705 (61%), Gaps = 69/705 (9%)
Query: 157 TKLAKDYYFDAKGDQDNLAFGSIYRMDIARYK---SQNMPEARGLKRLLFHNLGVSVHMG 213
+K KDYY D + D DNLA+GSIYRM++ RYK SQ +P G R N S+ +
Sbjct: 165 SKPVKDYYLDTRPDPDNLAYGSIYRMNVPRYKLDNSQRVP-GSGSLRFYLRNRRSSM-LD 222
Query: 214 HESDLDGLNSKARAGGRYYSAKYAVVERNKGFKHLKVLKKDNSAILP--EDFIPL----G 267
E D+D L +A++ RY+ AK+A +ERNK FK ++ L + A+ ++FIPL
Sbjct: 223 TEIDIDSLEGRAKSDTRYWYAKHAAMERNKNFKRIR-LSAASEAVDSSFDNFIPLEEDVT 281
Query: 268 IPSLPENNT-TGEQELEESWEDEILRRTREFNKMSREFPHNEKIWLDFARFQDKVASTQP 326
+P E + + + + SWEDE+L +TREFN+++RE PH+ K WL FA FQDKV+S Q
Sbjct: 282 VPESDEEDVLSKDSMIGASWEDEVLNKTREFNRVTRERPHDAKAWLAFADFQDKVSSMQS 341
Query: 327 QKAARLQTTERKISILEKAVELNPDNEELLLYLLKAYGERDSTQNLLDKWEQILMKHPDS 386
QK RLQT E+KISILEKA ELNPD+EELLL LLKAY RD+ L+
Sbjct: 342 QKGVRLQTLEKKISILEKAFELNPDSEELLLALLKAYRSRDNADVLI------------- 388
Query: 387 CKLWKQYLLLCQGEFSRFKVSDLRKSYAYAVQALSAACTKLCRQ-DTQYDRLEPKYSSLI 445
EFSRFKVS++R+ Y+YA+QALS+AC+K RQ DT EP S+ I
Sbjct: 389 ------------REFSRFKVSEVRRLYSYAIQALSSACSKRHRQVDTTS---EPLDSAAI 433
Query: 446 HLELGLVDIFVNLCRFEWHTGHRELATALFQAQIEFSLFSPPLHLTTSSKQRLFEHFWNN 505
EL LVD+ V+LCRFEW G++ELATAL QA++EFS+FSP L LT SK RLFEHFW++
Sbjct: 434 QQELVLVDMLVSLCRFEWQAGYQELATALLQAEVEFSIFSPSLLLTEQSKLRLFEHFWSS 493
Query: 506 GGARIGEDGALGWSRWLAKDEESRQNIDIQENTQETERGGWSGWFDP-SLRTNSETSKVE 564
GAR+GE+GA GW WL K+EE+RQ I +E++ + E GGW+GW + S R + +
Sbjct: 494 NGARVGEEGAFGWLLWLEKEEENRQKILKEESSDDNEVGGWTGWTEQVSGRNGDDLASAN 553
Query: 565 PSTSD----GNDAENPDDEDPSAQEDVESLLKKLGIDGDADYNSEVKDPKTWNRWSFMEL 620
D G D E +DE+ ++D E++LK LGID + + EVKD TW W E+
Sbjct: 554 TGEVDVDRKGLD-EEMEDENSKPEDDTEAMLKLLGIDVNTAASDEVKDTSTWVEWFEEEV 612
Query: 621 SRDNEQWMPLHEKLGSLYS-DDAPTGEDNDQLSRVILFEDITEFLFSLSSEEARFSLICQ 679
SRD+ QWMP K G S + GED +QLS V+L+EDI +LFSL S+EAR SL+ Q
Sbjct: 613 SRDHSQWMPTR-KAGEFSSVEGMGEGEDEEQLSSVVLYEDINGYLFSLRSKEARLSLVYQ 671
Query: 680 FIDFYGGKISRWTSTNSSSWIDRNLSLEMITDDIQEDLSTVSNLIDKNQTSVHNKMVSLL 739
FIDF+G IS SW ++ SLE ++D + E+L +V + K+ ++ + SLL
Sbjct: 672 FIDFFGAHISPMDFQQQLSWSEKISSLETLSDSMLENLRSVHECLSKSDSANCFSLGSLL 731
Query: 740 GTMHEFSQRPGTAKFLKNAILLFLDVFPRNHILEEAVLVTPQIHTAQEKYLATPATASRA 799
G + S R KFL+NAILL L+VFP+N+I EEAVLVT ++ K
Sbjct: 732 GGSCDLSMRTEMMKFLRNAILLCLNVFPQNYIPEEAVLVTEELFVTNMKTC--------- 782
Query: 800 LAKNLLKKDRQDLLLCGIYGRIEAMNGDFVKARHIFDLALSTSQG 844
+DLLLCG+Y + EA +G+ AR +FD+AL++ G
Sbjct: 783 ----------EDLLLCGVYAQREAASGNMKHARRVFDMALTSICG 817
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.133 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 24,107,649
Number of extensions: 1031527
Number of successful extensions: 3327
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 3311
Number of HSP's successfully gapped: 2
Length of query: 1164
Length of database: 11,106,569
Length adjustment: 109
Effective length of query: 1055
Effective length of database: 8,118,225
Effective search space: 8564727375
Effective search space used: 8564727375
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 117 (49.7 bits)