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Os02g0770000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Beta 1 subunit of 20S proteasome.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.1 (0.0105) R2 : 0.00213
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0217 (0.022) R2dN8 : 0.00276 R2N8 : 0.00213
σ : 0.197
deviance : 17.8
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
13.51 0.173 12.1 0.203 0.154 -0.23 -0.563 0.15 0.0377 22.6 0.23 66 -- --
13.57 0.172 12.1 0.207 0.13 -0.214 -0.484 -- 0.0241 22.2 0.23 62 -- --
13.96 0.174 12.1 0.219 0.154 -0.226 -- -0.167 0.0505 22.7 0.4012 39 -- --
14.2 0.176 12.1 0.215 0.129 -0.21 -- -- 0.0306 22.9 0.24 58 -- --
14.16 0.175 12.1 0.274 -- -0.128 -- -0.265 0.0564 -- 0.3229 58 -- --
14.9 0.181 12.1 0.231 0.121 -- 0.336 -- 0.0486 12.3 -- -- -- --
15.31 0.183 12.1 0.245 0.126 -- -- -- 0.0511 13.5 -- -- -- --
14.51 0.177 12.1 0.254 -- -0.139 -- -- 0.0461 -- 0.1786 118 -- --
15.52 0.183 12.1 -- 0.183 -0.263 -- -- 0.0306 23.5 0.18 68 -- --
16.28 0.189 12.1 0.24 -- -- -- -- 0.0483 -- -- -- -- --
16.88 0.192 12.1 -- 0.122 -- -- -- 0.0238 13.5 -- -- -- --
15.98 0.186 12.1 -- -- -0.148 -- -- 0.028 -- 0.1706 120 -- --
17.8 0.197 12.1 -- -- -- -- -- 0.0217 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.31 radiation 20.0 90 < th dose independent rect. 5 6
2 12.31 radiation 40.0 90 < th dose dependent rect. 5 6
3 12.35 radiation 40.0 90 < th dose independent rect. 5 6
5 12.37 radiation 10.0 270 < th dose independent rect. 5 2
6 12.39 temperature 15.0 90 > th dose dependent rect. 23 6
7 12.42 temperature 20.0 90 > th dose independent rect. 23 6
8 12.44 radiation 20.0 90 < th dose independent rect. 5 19
12 12.49 radiation 1.0 90 > th dose independent sin 9 NA
16 12.51 radiation 1.0 90 < th dose dependent sin 10 NA
18 12.54 radiation 20.0 270 < th dose dependent rect. 5 2
20 12.54 humidity 50.0 90 > th dose dependent rect. 5 6
22 12.55 atmosphere 1015.0 90 < th dose independent rect. 9 20
23 12.55 temperature 10.0 270 > th dose dependent rect. 5 2
27 12.55 radiation 40.0 90 < th dose dependent rect. 5 19
33 12.57 radiation 40.0 10 < th dose dependent rect. 6 18
44 12.61 radiation 40.0 90 < th dose independent rect. 5 18
48 12.62 radiation 1.0 90 < th dose independent sin 10 NA
51 12.62 wind 9.0 90 < th dose dependent rect. 21 8
55 12.63 atmosphere 1015.0 90 < th dose independent rect. 21 8
61 12.64 atmosphere 1015.0 270 < th dose independent rect. 7 21
65 12.65 temperature 20.0 270 > th dose independent rect. 23 3
68 12.66 atmosphere 1010.0 270 < th dose independent rect. 5 2
73 12.67 humidity 70.0 270 > th dose independent rect. 5 2
80 12.68 humidity 50.0 270 > th dose dependent rect. 5 2
82 12.68 temperature 10.0 90 > th dose dependent rect. 9 20
87 12.69 temperature 15.0 270 > th dose dependent rect. 23 3
99 12.71 wind 3.0 30 < th dose independent rect. 22 7
118 12.74 wind 7.0 270 < th dose independent rect. 5 2
120 12.74 temperature 10.0 270 > th dose independent rect. 5 2
122 12.74 temperature 30.0 270 < th dose independent rect. 5 2
123 12.74 humidity 50.0 270 > th dose independent rect. 5 2
125 12.74 atmosphere 995.0 270 > th dose independent rect. 5 2
129 12.74 precipitation 0.1 270 < th dose independent rect. 5 2
130 12.74 temperature 10.0 270 > th dose independent rect. 7 22
132 12.74 precipitation 0.1 270 < th dose dependent rect. 5 2
135 12.75 atmosphere 1010.0 90 < th dose independent rect. 5 4
163 12.78 humidity 70.0 90 > th dose independent rect. 5 4
165 12.78 temperature 20.0 90 > th dose independent rect. 9 20
166 12.78 wind 9.0 270 < th dose independent rect. 7 22
168 12.78 atmosphere 1015.0 270 < th dose dependent rect. 5 2
172 12.78 radiation 40.0 10 < th dose dependent rect. 5 21
180 12.79 atmosphere 1015.0 90 < th dose dependent rect. 5 4
181 12.79 atmosphere 1000.0 90 > th dose dependent rect. 24 5
183 12.79 radiation 40.0 270 < th dose dependent rect. 3 8
194 12.80 radiation 40.0 90 < th dose dependent rect. 5 8
199 12.81 atmosphere 1015.0 270 < th dose independent rect. 23 13
201 12.81 wind 9.0 270 < th dose dependent rect. 5 2
213 12.82 atmosphere 1000.0 90 > th dose independent rect. 5 16
214 12.82 humidity 60.0 90 > th dose independent rect. 5 18
224 12.82 humidity 50.0 90 > th dose dependent rect. 21 8
225 12.82 humidity 50.0 90 > th dose dependent rect. 5 10
226 12.82 radiation 40.0 90 < th dose dependent rect. 5 10
235 12.83 wind 9.0 90 < th dose dependent rect. 5 5
248 12.84 radiation 40.0 10 < th dose dependent rect. 6 5
255 12.84 radiation 40.0 270 < th dose dependent rect. 3 10
258 12.84 humidity 50.0 90 > th dose dependent rect. 5 12
263 12.85 radiation 20.0 90 < th dose independent rect. 5 8
270 12.86 temperature 30.0 90 < th dose independent rect. 5 5
271 12.86 radiation 20.0 270 < th dose independent rect. 3 7
284 12.87 wind 7.0 90 < th dose independent rect. 21 8
298 12.88 precipitation 0.1 90 < th dose independent rect. 5 4
300 12.88 humidity 80.0 30 > th dose independent rect. 24 5
303 12.88 radiation 40.0 270 < th dose independent rect. 12 11
304 12.88 humidity 50.0 90 > th dose independent rect. 5 16
305 12.88 precipitation 0.1 90 < th dose independent rect. 5 16
309 12.88 precipitation 0.1 90 < th dose dependent rect. 5 4
314 12.88 precipitation 0.1 90 < th dose dependent rect. 5 16
317 12.89 wind 9.0 90 < th dose independent rect. 5 4
318 12.89 temperature 10.0 90 > th dose independent rect. 5 4
320 12.89 humidity 50.0 90 > th dose independent rect. 5 4
322 12.89 atmosphere 995.0 90 > th dose independent rect. 5 4
324 12.89 atmosphere 1005.0 90 > th dose independent rect. 24 5
329 12.89 temperature 10.0 90 > th dose independent rect. 9 20
350 12.90 radiation 40.0 90 < th dose independent rect. 5 10
352 12.90 atmosphere 1000.0 90 > th dose independent rect. 5 18
362 12.91 temperature 15.0 90 > th dose independent rect. 5 18
363 12.91 radiation 40.0 270 < th dose independent rect. 3 19
405 12.93 temperature 10.0 90 > th dose independent rect. 21 8
406 12.93 temperature 30.0 90 < th dose independent rect. 21 8
407 12.93 humidity 50.0 90 > th dose independent rect. 21 8
410 12.93 atmosphere 995.0 90 > th dose independent rect. 21 8
412 12.93 radiation 20.0 90 < th dose independent rect. 21 8
415 12.93 precipitation 0.1 270 < th dose independent rect. 17 14
416 12.93 wind 9.0 90 < th dose independent rect. 5 16
417 12.93 temperature 10.0 90 > th dose independent rect. 5 16
420 12.93 atmosphere 1015.0 90 < th dose independent rect. 5 16
421 12.93 humidity 60.0 10 > th dose independent rect. 5 19
431 12.93 humidity 50.0 90 > th dose dependent rect. 18 11
432 12.93 precipitation 0.1 270 < th dose dependent rect. 17 14
441 12.94 precipitation 0.1 90 < th dose independent rect. 5 18
447 12.94 humidity 50.0 10 > th dose dependent rect. 6 5
451 12.94 radiation 20.0 90 < th dose dependent rect. 21 8
455 12.94 precipitation 0.1 90 < th dose dependent rect. 5 18
479 12.95 radiation 1.0 90 < th dose independent rect. 21 8
481 12.95 precipitation 0.1 90 < th dose independent rect. 21 8
483 12.95 radiation 20.0 90 < th dose independent rect. 5 10
488 12.95 wind 9.0 90 < th dose independent rect. 9 20
495 12.95 atmosphere 1000.0 270 > th dose dependent rect. 24 2
500 12.95 humidity 50.0 90 > th dose dependent rect. 23 6
502 12.95 radiation 1.0 90 < th dose dependent rect. 21 8
504 12.95 precipitation 0.1 90 < th dose dependent rect. 21 8
506 12.95 wind 9.0 90 < th dose dependent rect. 10 19
521 12.96 radiation 10.0 10 < th dose dependent rect. 24 6
530 12.97 radiation 1.0 90 > th dose independent rect. 5 4
560 12.97 humidity 50.0 90 > th dose dependent rect. 5 18
567 12.98 precipitation 0.1 270 < th dose independent rect. 12 11
584 12.98 precipitation 0.1 270 < th dose dependent rect. 12 11
591 12.99 atmosphere 1005.0 270 > th dose independent rect. 24 2
595 12.99 wind 3.0 90 < th dose independent rect. 5 6
599 12.99 wind 9.0 90 < th dose independent rect. 5 18
628 13.00 radiation 1.0 30 < th dose independent rect. 24 6
640 13.00 radiation 1.0 90 < th dose dependent rect. 23 6
642 13.00 wind 5.0 90 < th dose dependent rect. 10 19
654 13.01 temperature 10.0 90 > th dose independent rect. 23 6
655 13.01 temperature 30.0 90 < th dose independent rect. 23 6
656 13.01 humidity 50.0 90 > th dose independent rect. 23 6
688 13.01 humidity 50.0 90 > th dose dependent rect. 5 16
690 13.02 wind 1.0 270 > th dose independent rect. 5 2
711 13.02 radiation 40.0 270 < th dose independent rect. 3 12
742 13.03 humidity 80.0 270 > th dose independent rect. 24 2
752 13.03 precipitation 0.1 90 < th dose independent rect. 23 6
756 13.03 humidity 50.0 270 > th dose independent rect. 23 13
776 13.03 precipitation 0.1 90 < th dose dependent rect. 23 6
783 13.03 radiation 40.0 10 < th dose dependent rect. 6 16
805 13.04 wind 3.0 30 < th dose independent rect. 18 11
806 13.04 temperature 10.0 270 > th dose independent rect. 12 11
807 13.04 temperature 10.0 270 > th dose independent rect. 23 13
808 13.04 atmosphere 995.0 270 > th dose independent rect. 23 13
823 13.04 wind 9.0 90 < th dose dependent rect. 5 16
829 13.05 wind 9.0 1440 < th dose independent rect. 1 5
847 13.05 radiation 20.0 270 < th dose independent rect. 17 14
865 13.05 wind 9.0 90 < th dose dependent rect. 5 18
867 13.05 radiation 40.0 270 < th dose dependent rect. 3 20
896 13.06 radiation 20.0 10 < th dose independent rect. 6 16
942 13.07 atmosphere 995.0 90 > th dose independent rect. 10 19
977 13.08 radiation 20.0 270 < th dose independent rect. 3 10
988 13.08 radiation 10.0 270 < th dose independent rect. 3 20