Os02g0765900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ferredoxin-nitrite reductase family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0765900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Ferredoxin-nitrite reductase family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 148.7 | 0.573 | 14.4 | 0.498 | 2.67 | 1.49 | 1.59 | -0.869 | -0.301 | 16.9 | 25 | 98 | 23.4 | -- |
| 149.62 | 0.57 | 14.4 | 0.611 | 2.66 | 1.49 | 1.47 | -- | -0.277 | 16.9 | 25 | 113 | 23.7 | -- |
| 155.03 | 0.58 | 14.4 | 0.514 | 2.69 | 1.52 | -- | -0.715 | -0.312 | 16.8 | 25.09 | 98 | 23.7 | -- |
| 155.51 | 0.581 | 14.4 | 0.613 | 2.68 | 1.51 | -- | -- | -0.265 | 16.8 | 25.1 | 113 | 23.8 | -- |
| 396.49 | 0.927 | 14.3 | 0.718 | -- | 1.49 | -- | 2.68 | -0.478 | -- | 26.2 | 547 | 21.2 | -- |
| 203.28 | 0.668 | 14.3 | 0.777 | 2.66 | -- | 1.58 | -- | 0.119 | 15.9 | -- | -- | -- | -- |
| 210.53 | 0.679 | 14.3 | 0.797 | 2.66 | -- | -- | -- | 0.128 | 15.9 | -- | -- | -- | -- |
| 212.52 | 0.679 | 14.3 | 0.929 | -- | 2.68 | -- | -- | 0.187 | -- | 14.74 | 800 | 20.8 | -- |
| 165.21 | 0.599 | 14.4 | -- | 2.7 | 1.59 | -- | -- | -0.336 | 16.9 | 25 | 113 | 23.8 | -- |
| 599.68 | 1.14 | 14.3 | 0.688 | -- | -- | -- | -- | 0.0572 | -- | -- | -- | -- | -- |
| 227.29 | 0.705 | 14.3 | -- | 2.65 | -- | -- | -- | 0.0395 | 15.9 | -- | -- | -- | -- |
| 223.31 | 0.696 | 14.3 | -- | -- | 2.68 | -- | -- | 0.0465 | -- | 14.9 | 824 | 21 | -- |
| 612.16 | 1.15 | 14.3 | -- | -- | -- | -- | -- | -0.0191 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 146.13 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 18 |
| 6 | 148.96 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 9 |
| 8 | 149.36 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 18 |
| 9 | 149.48 | temperature | 25.0 | 90 | > th | dose independent | sin | 5 | NA |
| 13 | 149.68 | wind | 9.0 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 21 | 150.49 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 22 | 150.78 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 10 |
| 24 | 151.06 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 18 |
| 28 | 151.49 | wind | 5.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 38 | 152.17 | temperature | 25.0 | 90 | > th | dose independent | rect. | 22 | 17 |
| 40 | 152.39 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 8 |
| 63 | 153.82 | temperature | 25.0 | 90 | < th | dose independent | sin | 5 | NA |
| 67 | 153.94 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 72 | 154.20 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 91 | 154.85 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 20 |
| 92 | 154.85 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 94 | 154.99 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 102 | 155.20 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 18 |
| 103 | 155.20 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 18 |
| 113 | 155.39 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 20 |
| 122 | 155.55 | radiation | 1.0 | 270 | > th | dose independent | sin | 4 | NA |
| 134 | 155.71 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 139 | 155.83 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 17 |
| 141 | 155.88 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 10 |
| 154 | 156.14 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 163 | 156.32 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 1 | 11 |
| 174 | 156.47 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 188 | 156.79 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 191 | 156.86 | temperature | 25.0 | 10 | > th | dose dependent | sin | 6 | NA |
| 210 | 157.21 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 232 | 157.53 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 1 | 14 |
| 238 | 157.60 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 21 |
| 242 | 157.64 | radiation | 1.0 | 270 | < th | dose independent | sin | 4 | NA |
| 243 | 157.64 | radiation | 1.0 | 270 | < th | dose dependent | sin | 3 | NA |
| 260 | 157.95 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 1 | 20 |
| 267 | 158.04 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 1 | 16 |
| 293 | 158.44 | temperature | 20.0 | 30 | > th | dose dependent | sin | 4 | NA |
| 311 | 158.63 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 342 | 158.81 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 1 | 18 |
| 345 | 158.86 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 22 |
| 346 | 158.86 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 22 |
| 353 | 158.97 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 381 | 159.22 | wind | 5.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 382 | 159.23 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 10 |
| 398 | 159.41 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 18 |
| 420 | 159.68 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 436 | 159.84 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 1 | 8 |
| 444 | 159.92 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 16 |
| 445 | 159.93 | humidity | 90.0 | 90 | < th | dose independent | sin | 4 | NA |
| 481 | 160.09 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 21 | 12 |
| 516 | 160.39 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 519 | 160.40 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 520 | 160.40 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 10 |
| 522 | 160.41 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 525 | 160.41 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 528 | 160.41 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 529 | 160.41 | radiation | 20.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 532 | 160.41 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 8 |
| 533 | 160.41 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 534 | 160.41 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 538 | 160.42 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 24 | 6 |
| 580 | 160.71 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 582 | 160.73 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 585 | 160.73 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 588 | 160.73 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 589 | 160.73 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 591 | 160.73 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 594 | 160.73 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 595 | 160.74 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 632 | 160.89 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 14 |
| 643 | 160.95 | temperature | 25.0 | 90 | > th | dose independent | rect. | 6 | 9 |
| 655 | 161.03 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 677 | 161.23 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 8 |
| 678 | 161.23 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 701 | 161.39 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 6 |
| 702 | 161.39 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 720 | 161.54 | humidity | 80.0 | 90 | > th | dose dependent | sin | 4 | NA |
| 759 | 161.85 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 776 | 161.98 | temperature | 10.0 | 10 | > th | dose dependent | sin | 3 | NA |
| 791 | 162.08 | radiation | 1.0 | 270 | > th | dose independent | rect. | 18 | 20 |
| 804 | 162.19 | temperature | 25.0 | 90 | > th | dose independent | rect. | 4 | 11 |
| 820 | 162.34 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 18 |
| 832 | 162.45 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 9 |
| 868 | 162.64 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 930 | 162.93 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 14 |
| 933 | 162.93 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 14 |
| 940 | 162.99 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 9 |