BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0765900 Os02g0765900|J033125O14
         (424 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G15620.1  | chr2:6810552-6812666 FORWARD LENGTH=587            382   e-106
AT5G04590.1  | chr5:1319404-1322298 FORWARD LENGTH=643             60   2e-09

>AT2G15620.1 | chr2:6810552-6812666 FORWARD LENGTH=587
          Length = 586

 Score =  382 bits (982), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 180/246 (73%), Positives = 213/246 (86%), Gaps = 1/246 (0%)

Query: 180 GMEVFWSEVEKRMPNGVLERAAPEDLIDKKWQRRDYLGVHPQKQEGLSYVGLHVPVGRVQ 239
           G+E F +EVEKRMPNG LER + EDL++K+W+RRDY GV+PQKQEGLS+VGLHVPVGR+Q
Sbjct: 341 GVEGFRTEVEKRMPNGKLERGSSEDLVNKQWERRDYFGVNPQKQEGLSFVGLHVPVGRLQ 400

Query: 240 AADMFELARLADEYGSGELRLTVEQNIVIPNVKDEKVEALLAEPLLQ-KFSPQPSLLLKG 298
           A DM ELARLAD YGSGELRLTVEQNI+IPNV+  K EALL EP L+ +FSP+PS+L+KG
Sbjct: 401 ADDMDELARLADTYGSGELRLTVEQNIIIPNVETSKTEALLQEPFLKNRFSPEPSILMKG 460

Query: 299 LVACTGNQFCGQAIIETKQRALLVTSQVEKLVSVPRAVRMHWTGCPNSCGQVQVADIGFM 358
           LVACTG+QFCGQAIIETK RAL VT +VE+LVSVPR +RMHWTGCPN+CGQVQVADIGFM
Sbjct: 461 LVACTGSQFCGQAIIETKLRALKVTEEVERLVSVPRPIRMHWTGCPNTCGQVQVADIGFM 520

Query: 359 GCLTKDSAGKIVEAADIFVGGRVGSDSHLAGVYKKSVPCDELAPIVADILVERFGAVRRE 418
           GCLT+   GK VE AD++VGGR+GSDSH+  +YKK V   EL P+VA+IL++ FGAV RE
Sbjct: 521 GCLTRGEEGKPVEGADVYVGGRIGSDSHIGEIYKKGVRVTELVPLVAEILIKEFGAVPRE 580

Query: 419 REENEE 424
           REENE+
Sbjct: 581 REENED 586




 Score =  205 bits (522), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 99/118 (83%), Positives = 106/118 (89%), Gaps = 1/118 (0%)

Query: 62  GRFMMRLKLPNGVTTSEQTRYLASVIEAYGKDGCADVTTRQNWQIRGVTLPDVPAILDGL 121
           G+FMMRLKLPNGVTTS QTRYLASVI  YG+DGCADVTTRQNWQIRGV LPDVP IL GL
Sbjct: 127 GKFMMRLKLPNGVTTSAQTRYLASVIRKYGEDGCADVTTRQNWQIRGVVLPDVPEILKGL 186

Query: 122 NAVGLTSLQSGMDNVRNPVGNPLAGIDPDEIVDTRSYTNLLS-YITSNFQGNPTITNL 178
            +VGLTSLQSGMDNVRNPVGNP+AGIDP+EIVDTR YTNLLS +IT+N QGNP  TNL
Sbjct: 187 ASVGLTSLQSGMDNVRNPVGNPIAGIDPEEIVDTRPYTNLLSQFITANSQGNPDFTNL 244



>AT5G04590.1 | chr5:1319404-1322298 FORWARD LENGTH=643
          Length = 642

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 13/160 (8%)

Query: 209 KWQRRDYLGVHPQKQEGLSYVGLHVPVGRVQAADMFELARLADEYGSGELRLTVEQNIVI 268
           +W+ + YLG H Q  +G  + GLHV  GRV       L  + ++Y   ++R+T  QNIV+
Sbjct: 410 EWEFKSYLGWHEQG-DGAWFCGLHVDSGRVGGIMKKTLREVIEKYKI-DVRITPNQNIVL 467

Query: 269 PNVKDE---KVEALLAEP-LLQKFSPQPSLLLKGLVACTGNQFCGQAIIETKQRALLVTS 324
            ++K E    +  +LA+  LLQ     P  L +  +AC     C  AI E ++    +  
Sbjct: 468 CDIKTEWKRPITTVLAQAGLLQPEFVDP--LNQTAMACPAFPLCPLAITEAERGIPSILK 525

Query: 325 QVEKL-----VSVPRAVRMHWTGCPNSCGQVQVADIGFMG 359
           +V  +     +    +V +  TGCPN C +  +A++G +G
Sbjct: 526 RVRAMFEKVGLDYDESVVIRVTGCPNGCARPYMAELGLVG 565



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.136    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,094,429
Number of extensions: 382435
Number of successful extensions: 832
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 828
Number of HSP's successfully gapped: 3
Length of query: 424
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 323
Effective length of database: 8,337,553
Effective search space: 2693029619
Effective search space used: 2693029619
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)