Os02g0762100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Regulator of ribonuclease-like protein 2.
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Os02g0762100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Regulator of ribonuclease-like protein 2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.77 | 0.427 | 11.3 | -1.03 | 2.36 | -1.16 | -0.419 | 0.39 | -0.652 | 21.1 | 95 | 178 | -- | -- |
| 82.97 | 0.424 | 11.3 | -1.03 | 2.36 | -1.15 | -0.47 | -- | -0.649 | 21.1 | 94.93 | 180 | -- | -- |
| 83.34 | 0.425 | 11.3 | -1.02 | 2.37 | -1.16 | -- | 0.502 | -0.651 | 21.1 | 94.87 | 180 | -- | -- |
| 83.74 | 0.426 | 11.3 | -1.02 | 2.36 | -1.13 | -- | -- | -0.648 | 21.1 | 94.87 | 180 | -- | -- |
| 309.34 | 0.819 | 11.3 | -0.869 | -- | -2.13 | -- | 0.136 | -0.773 | -- | 88.49 | 650 | -- | -- |
| 109.43 | 0.49 | 11.3 | -1.13 | 2.6 | -- | -0.201 | -- | -0.508 | 20.6 | -- | -- | -- | -- |
| 109.56 | 0.49 | 11.3 | -1.12 | 2.6 | -- | -- | -- | -0.508 | 20.6 | -- | -- | -- | -- |
| 309.32 | 0.819 | 11.3 | -0.878 | -- | -2.12 | -- | -- | -0.807 | -- | 88.38 | 648 | -- | -- |
| 110.87 | 0.49 | 11.3 | -- | 2.34 | -1.24 | -- | -- | -0.56 | 21.1 | 94 | 178 | -- | -- |
| 489.91 | 1.03 | 11.2 | -1.13 | -- | -- | -- | -- | -0.532 | -- | -- | -- | -- | -- |
| 142.6 | 0.559 | 11.2 | -- | 2.61 | -- | -- | -- | -0.383 | 20.5 | -- | -- | -- | -- |
| 329.49 | 0.845 | 11.3 | -- | -- | -2.18 | -- | -- | -0.719 | -- | 88.53 | 647 | -- | -- |
| 523.55 | 1.07 | 11.2 | -- | -- | -- | -- | -- | -0.406 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.80 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 2 | 84.20 | wind | 3.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 4 | 84.51 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 6 |
| 7 | 84.69 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 9 | 84.79 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 2 |
| 14 | 85.20 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 4 | 2 |
| 19 | 85.38 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 23 | 85.51 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 13 |
| 26 | 85.59 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 17 |
| 29 | 85.69 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 15 |
| 39 | 85.97 | wind | 3.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 51 | 86.24 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 57 | 86.31 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 76 | 86.64 | radiation | 10.0 | 30 | < th | dose independent | rect. | 4 | 4 |
| 84 | 86.81 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 85 | 86.87 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 93 | 87.07 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 111 | 87.37 | temperature | 20.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 120 | 87.44 | humidity | 90.0 | 30 | > th | dose dependent | sin | 2 | NA |
| 142 | 87.71 | wind | 3.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 144 | 87.74 | wind | 3.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 195 | 88.32 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 205 | 88.37 | wind | 9.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 206 | 88.37 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 208 | 88.37 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 209 | 88.37 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 211 | 88.37 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 214 | 88.37 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 21 |
| 221 | 88.40 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 13 |
| 227 | 88.45 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 3 |
| 228 | 88.45 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 241 | 88.53 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 21 |
| 242 | 88.53 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 21 |
| 256 | 88.58 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 23 | 7 |
| 296 | 88.73 | wind | 9.0 | 90 | < th | dose independent | rect. | 7 | 21 |
| 324 | 88.83 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 17 | 13 |
| 329 | 88.90 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 5 | 1 |
| 344 | 88.98 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 12 | 18 |
| 352 | 89.08 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 7 | 21 |
| 359 | 89.11 | humidity | 90.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 364 | 89.15 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 379 | 89.23 | wind | 1.0 | 90 | > th | dose independent | rect. | 23 | 14 |
| 416 | 89.37 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 1 | 20 |
| 428 | 89.44 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 456 | 89.57 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 12 |
| 467 | 89.63 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 6 |
| 471 | 89.65 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 481 | 89.68 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 500 | 89.75 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 12 |
| 511 | 89.80 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 512 | 89.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 514 | 89.80 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 515 | 89.80 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 518 | 89.80 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 526 | 89.80 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 532 | 89.82 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 6 |
| 557 | 89.89 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 15 |
| 565 | 89.91 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 23 | 22 |
| 568 | 89.93 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 699 | 90.29 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 4 |
| 700 | 90.29 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 758 | 90.45 | wind | 3.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 840 | 90.57 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 17 |
| 950 | 90.89 | humidity | 90.0 | 90 | < th | dose independent | rect. | 23 | 14 |