BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0762100 Os02g0762100|AK068833
         (168 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G16450.1  | chr5:5374357-5375342 FORWARD LENGTH=167            238   1e-63
AT3G02770.1  | chr3:601017-601884 REVERSE LENGTH=167              234   1e-62
AT5G56260.1  | chr5:22775549-22776049 REVERSE LENGTH=167          219   7e-58

>AT5G16450.1 | chr5:5374357-5375342 FORWARD LENGTH=167
          Length = 166

 Score =  238 bits (606), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 114/163 (69%), Positives = 132/163 (80%)

Query: 6   LATAEVCDANSNPIIAGELRALPPIFKIYGRRQVFAGPVATVKVFEDNVLVRELLQEKGH 65
           + TAEVCDAN   I +G+LRAL PIF+IYGRRQ+F+GPV TVKVFEDN L+R+ ++EKG+
Sbjct: 4   VTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEEKGN 63

Query: 66  GRVLVVDGGGSVRCXXXXXXXXXXXXINGWVGIVVNGCIRDVDEINGCDVGVRALNSHPM 125
           GRVLVVDGGGS RC             NGW GIVVNGCIRDVDEINGCD+GVRAL SHP+
Sbjct: 64  GRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPI 123

Query: 126 KSGKKGAGEKRVPVTIEGTRICDGEWLYADADGILISRTELTV 168
           K+ KKG GE+RVPV I GTRICDGEWLYAD DGIL+S+ EL+V
Sbjct: 124 KASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166



>AT3G02770.1 | chr3:601017-601884 REVERSE LENGTH=167
          Length = 166

 Score =  234 bits (598), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 111/163 (68%), Positives = 131/163 (80%)

Query: 6   LATAEVCDANSNPIIAGELRALPPIFKIYGRRQVFAGPVATVKVFEDNVLVRELLQEKGH 65
           + TAEVCDAN   I +G+LRAL P+F+IYGRRQ+F+GPV TVKVFEDN L+R  L+EKG+
Sbjct: 4   VTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEEKGN 63

Query: 66  GRVLVVDGGGSVRCXXXXXXXXXXXXINGWVGIVVNGCIRDVDEINGCDVGVRALNSHPM 125
           GRVLVVDGGGS+RC             NGW GI+VNGCIRDVDEINGCD+GVRAL SHP+
Sbjct: 64  GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALASHPI 123

Query: 126 KSGKKGAGEKRVPVTIEGTRICDGEWLYADADGILISRTELTV 168
           K+ KKG GE+RV + I GTRICDGEWLYAD DGIL+S+ EL+V
Sbjct: 124 KASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELSV 166



>AT5G56260.1 | chr5:22775549-22776049 REVERSE LENGTH=167
          Length = 166

 Score =  219 bits (557), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 112/168 (66%), Positives = 129/168 (76%), Gaps = 2/168 (1%)

Query: 1   MAALPLATAEVCDANSNPIIAGELRALPPIFKIYGRRQVFAGPVATVKVFEDNVLVRELL 60
           MAA   ATAE CD+N+  I  G+LRAL PIFKIYG+R+ F+GP+ T+KVFEDNVLVR  L
Sbjct: 1   MAAF--ATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQL 58

Query: 61  QEKGHGRVLVVDGGGSVRCXXXXXXXXXXXXINGWVGIVVNGCIRDVDEINGCDVGVRAL 120
           + KG G VLV+DGGGS+RC             NGW GIVVNGC+RDVDEIN CDVGVRAL
Sbjct: 59  ETKGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRAL 118

Query: 121 NSHPMKSGKKGAGEKRVPVTIEGTRICDGEWLYADADGILISRTELTV 168
            S+P+KS KKG GEK VPV I GT I DGEWLYAD+DGILIS+TEL+V
Sbjct: 119 GSNPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELSV 166



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.321    0.141    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,482,136
Number of extensions: 131956
Number of successful extensions: 208
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 208
Number of HSP's successfully gapped: 3
Length of query: 168
Length of database: 11,106,569
Length adjustment: 91
Effective length of query: 77
Effective length of database: 8,611,713
Effective search space: 663101901
Effective search space used: 663101901
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 108 (46.2 bits)