Os02g0759800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to GAMYB-binding protein (Fragment).
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Os02g0759800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to GAMYB-binding protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.68 | 0.192 | 12.8 | 0.844 | 0.462 | -0.64 | -0.141 | -0.0777 | 0.407 | 2.43 | 80 | 1411 | -- | -- |
| 16.68 | 0.19 | 12.8 | 0.847 | 0.463 | -0.643 | -0.137 | -- | 0.408 | 2.41 | 80 | 1405 | -- | -- |
| 16.75 | 0.191 | 12.8 | 0.847 | 0.465 | -0.644 | -- | -0.0797 | 0.408 | 2.42 | 80 | 1405 | -- | -- |
| 16.76 | 0.191 | 12.8 | 0.854 | 0.464 | -0.649 | -- | -- | 0.409 | 2.42 | 79.97 | 1405 | -- | -- |
| 22.97 | 0.224 | 12.8 | 0.865 | -- | -0.306 | -- | 0.0625 | 0.388 | -- | 80 | 1405 | -- | -- |
| 21.67 | 0.218 | 12.9 | 0.829 | 0.446 | -- | -0.216 | -- | 0.371 | 2.32 | -- | -- | -- | -- |
| 21.84 | 0.219 | 12.9 | 0.835 | 0.445 | -- | -- | -- | 0.372 | 2.3 | -- | -- | -- | -- |
| 23 | 0.224 | 12.8 | 0.863 | -- | -0.306 | -- | -- | 0.388 | -- | 80 | 1405 | -- | -- |
| 34.65 | 0.274 | 12.9 | -- | 0.422 | -0.671 | -- | -- | 0.322 | 2.4 | 83 | 1571 | -- | -- |
| 33.61 | 0.271 | 12.8 | 0.853 | -- | -- | -- | -- | 0.383 | -- | -- | -- | -- | -- |
| 40.21 | 0.297 | 12.9 | -- | 0.461 | -- | -- | -- | 0.279 | 2.33 | -- | -- | -- | -- |
| 41.83 | 0.302 | 12.9 | -- | -- | -0.311 | -- | -- | 0.285 | -- | 82.97 | 3120 | -- | -- |
| 52.82 | 0.339 | 12.9 | -- | -- | -- | -- | -- | 0.288 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.43 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 2 | 16.45 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 3 | 16.45 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 18 |
| 4 | 16.45 | humidity | 80 | 1440 | > th | dose independent | rect. | 1 | 20 |
| 6 | 16.46 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 12 |
| 11 | 16.46 | humidity | 80 | 1440 | < th | dose independent | rect. | 1 | 20 |
| 13 | 16.47 | humidity | 80 | 1440 | < th | dose independent | rect. | 3 | 18 |
| 22 | 16.49 | humidity | 80 | 1440 | > th | dose independent | sin | 22 | NA |
| 30 | 16.51 | humidity | 80 | 1440 | < th | dose independent | sin | 23 | NA |
| 40 | 16.54 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 61 | 16.59 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 19 |
| 95 | 16.64 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 19 |
| 126 | 16.68 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 129 | 16.68 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 17 |
| 138 | 16.68 | humidity | 80 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 175 | 16.72 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 186 | 16.72 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 198 | 16.73 | humidity | 80 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 206 | 16.75 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 209 | 16.75 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 218 | 16.76 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 276 | 16.85 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 9 |
| 294 | 16.87 | humidity | 70 | 1440 | > th | dose dependent | rect. | 9 | 13 |
| 334 | 16.93 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 5 |
| 363 | 16.96 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 370 | 16.96 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 428 | 17.04 | humidity | 70 | 1440 | > th | dose dependent | sin | 21 | NA |
| 531 | 17.20 | humidity | 70 | 1440 | > th | dose dependent | rect. | 10 | 5 |
| 590 | 17.25 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 17 |
| 601 | 17.26 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 17 |
| 632 | 17.29 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 689 | 17.33 | humidity | 90 | 1440 | < th | dose dependent | sin | 17 | NA |
| 986 | 17.47 | humidity | 90 | 1440 | < th | dose dependent | rect. | 1 | 21 |
| 996 | 17.48 | humidity | 70 | 1440 | > th | dose dependent | rect. | 17 | 4 |