Os02g0754000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : TLDc domain containing protein.
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Os02g0754000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : TLDc domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.07 | 0.194 | 11.1 | 0.357 | 0.54 | -0.675 | 0.0872 | 0.294 | 0.209 | 23.4 | 78.98 | 1358 | -- | -- |
| 17.14 | 0.193 | 11.1 | 0.333 | 0.548 | -0.652 | 0.0902 | -- | 0.205 | 23.4 | 79 | 1342 | -- | -- |
| 17.09 | 0.193 | 11.1 | 0.354 | 0.548 | -0.675 | -- | 0.313 | 0.211 | 23.4 | 78.99 | 1338 | -- | -- |
| 17.17 | 0.193 | 11.1 | 0.329 | 0.551 | -0.651 | -- | -- | 0.204 | 23.4 | 79 | 1334 | -- | -- |
| 30.49 | 0.259 | 11.1 | 0.334 | -- | -0.282 | -- | -0.00144 | 0.167 | -- | 78.99 | 1338 | -- | -- |
| 22.47 | 0.222 | 11.1 | 0.299 | 0.52 | -- | 0.0573 | -- | 0.173 | 23.1 | -- | -- | -- | -- |
| 22.49 | 0.222 | 11.1 | 0.297 | 0.52 | -- | -- | -- | 0.173 | 23.1 | -- | -- | -- | -- |
| 30.49 | 0.258 | 11.1 | 0.334 | -- | -0.282 | -- | -- | 0.167 | -- | 78.99 | 1338 | -- | -- |
| 19.89 | 0.208 | 11.1 | -- | 0.552 | -0.618 | -- | -- | 0.175 | 23.4 | 79.02 | 1335 | -- | -- |
| 39.34 | 0.293 | 11.1 | 0.309 | -- | -- | -- | -- | 0.177 | -- | -- | -- | -- | -- |
| 24.81 | 0.233 | 11.1 | -- | 0.523 | -- | -- | -- | 0.14 | 23.1 | -- | -- | -- | -- |
| 33.42 | 0.27 | 11.1 | -- | -- | -0.275 | -- | -- | 0.13 | -- | 78.99 | 1338 | -- | -- |
| 41.85 | 0.302 | 11.1 | -- | -- | -- | -- | -- | 0.143 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.37 | humidity | 80 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 4 | 16.57 | humidity | 80 | 1440 | < th | dose independent | rect. | 1 | 14 |
| 7 | 16.59 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 19 | 16.66 | humidity | 80 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 22 | 16.66 | humidity | 80 | 1440 | > th | dose independent | rect. | 1 | 15 |
| 27 | 16.69 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 30 | 16.70 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 54 | 16.75 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 11 |
| 57 | 16.75 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 9 |
| 69 | 16.78 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 19 |
| 81 | 16.80 | radiation | 10 | 1440 | < th | dose dependent | rect. | 12 | 6 |
| 109 | 16.85 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 128 | 16.86 | radiation | 10 | 1440 | < th | dose dependent | sin | 19 | NA |
| 211 | 17.03 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 247 | 17.07 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 255 | 17.07 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 3 |
| 262 | 17.09 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 351 | 17.22 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 361 | 17.24 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 364 | 17.24 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 368 | 17.26 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 370 | 17.26 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 20 |
| 402 | 17.30 | humidity | 70 | 1440 | > th | dose dependent | rect. | 9 | 6 |
| 422 | 17.32 | humidity | 80 | 720 | > th | dose independent | rect. | 8 | 19 |
| 454 | 17.35 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 505 | 17.41 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 525 | 17.42 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 539 | 17.43 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 573 | 17.46 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 585 | 17.47 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 10 |
| 614 | 17.48 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 616 | 17.48 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 633 | 17.50 | radiation | 10 | 1440 | > th | dose independent | sin | 23 | NA |
| 643 | 17.51 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 656 | 17.52 | humidity | 80 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 677 | 17.54 | radiation | 10 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 775 | 17.62 | radiation | 10 | 1440 | > th | dose independent | no | NA | NA |
| 903 | 17.66 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 23 |