Os02g0753300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipoxygenase, LH2 domain containing protein.
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Os02g0753300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lipoxygenase, LH2 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 142.35 | 0.561 | 11.1 | -2.64 | 2.18 | 2.46 | 0.315 | 2.67 | -0.0653 | 21.8 | 0.8902 | 11450 | -- | -- |
| 168.29 | 0.604 | 11.1 | -2.68 | 2.28 | 2.22 | 0.415 | -- | 0.0351 | 21.7 | 1.15 | 13030 | -- | -- |
| 142.19 | 0.555 | 11.1 | -2.65 | 2.01 | 2.59 | -- | 2.79 | -0.0752 | 21.8 | 0.8985 | 11340 | -- | -- |
| 155.7 | 0.581 | 11.1 | -2.93 | 2.06 | 1.96 | -- | -- | 0.13 | 21.7 | 1.16 | 14206 | -- | -- |
| 327.78 | 0.843 | 11.2 | -3.1 | -- | 3.77 | -- | 2.65 | -0.34 | -- | 1.12 | 12588 | -- | -- |
| 238.51 | 0.724 | 11.1 | -2.51 | 2.3 | -- | 0.547 | -- | 0.333 | 22 | -- | -- | -- | -- |
| 239.66 | 0.725 | 11.1 | -2.53 | 2.3 | -- | -- | -- | 0.332 | 22 | -- | -- | -- | -- |
| 308.34 | 0.818 | 11.3 | -2.99 | -- | 3.88 | -- | -- | -0.233 | -- | 1.574 | 6831 | -- | -- |
| 363.76 | 0.888 | 11.1 | -- | 2.32 | 1.3 | -- | -- | 0.264 | 21.7 | 29.48 | 8740 | -- | -- |
| 557.86 | 1.1 | 11 | -2.5 | -- | -- | -- | -- | 0.333 | -- | -- | -- | -- | -- |
| 408.19 | 0.945 | 11 | -- | 2.29 | -- | -- | -- | 0.614 | 21.9 | -- | -- | -- | -- |
| 505.56 | 1.05 | 10.9 | -- | -- | -1.39 | -- | -- | 0.658 | -- | 1.574 | 6831 | -- | -- |
| 722.94 | 1.26 | 11 | -- | -- | -- | -- | -- | 0.611 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 137.11 | humidity | 60 | 43200 | > th | dose independent | rect. | 13 | 11 |
| 4 | 137.22 | humidity | 70 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 8 | 137.34 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 13 |
| 11 | 137.42 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 13 |
| 25 | 137.83 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 30 | 138.06 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 32 | 138.11 | radiation | 10 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 36 | 138.20 | humidity | 60 | 43200 | < th | dose independent | rect. | 13 | 9 |
| 54 | 138.53 | temperature | 30 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 59 | 138.59 | humidity | 60 | 43200 | > th | dose independent | sin | 18 | NA |
| 63 | 138.62 | temperature | 10 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 68 | 138.69 | humidity | 50 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 83 | 138.82 | humidity | 50 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 96 | 138.93 | temperature | 10 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 99 | 138.94 | temperature | 30 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 128 | 139.19 | radiation | 1 | 43200 | > th | dose independent | sin | 12 | NA |
| 130 | 139.20 | radiation | 1 | 43200 | < th | dose independent | sin | 12 | NA |
| 171 | 139.33 | radiation | 1 | 43200 | < th | dose independent | rect. | 16 | 6 |
| 200 | 139.42 | humidity | 60 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 255 | 139.69 | humidity | 70 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 264 | 139.71 | radiation | 1 | 43200 | > th | dose independent | rect. | 16 | 20 |
| 280 | 139.79 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 290 | 139.82 | radiation | 1 | 43200 | < th | dose independent | rect. | 16 | 20 |
| 326 | 139.90 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 357 | 139.95 | radiation | 10 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 374 | 139.99 | humidity | 60 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 427 | 140.16 | temperature | 30 | 43200 | < th | dose dependent | rect. | 17 | 16 |
| 428 | 140.17 | humidity | 60 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 446 | 140.22 | temperature | 10 | 43200 | > th | dose dependent | rect. | 17 | 16 |
| 511 | 140.35 | humidity | 60 | 43200 | > th | dose independent | rect. | 5 | 13 |
| 555 | 140.43 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 600 | 140.49 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 6 |
| 647 | 140.54 | temperature | 10 | 43200 | > th | dose dependent | rect. | 3 | 19 |
| 657 | 140.56 | temperature | 30 | 43200 | < th | dose dependent | sin | 10 | NA |
| 709 | 140.61 | radiation | 1 | 14400 | < th | dose independent | rect. | 1 | 10 |
| 716 | 140.62 | temperature | 10 | 43200 | > th | dose dependent | sin | 8 | NA |
| 808 | 140.69 | humidity | 70 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 819 | 140.70 | humidity | 60 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 885 | 140.76 | temperature | 10 | 43200 | > th | dose dependent | no | NA | NA |
| 916 | 140.79 | humidity | 60 | 43200 | < th | dose independent | sin | 17 | NA |
| 995 | 140.85 | temperature | 30 | 43200 | < th | dose dependent | rect. | 3 | 19 |