Os02g0750600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ubiquitin domain containing protein.
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Os02g0750600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ubiquitin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.07 | 0.29 | 10.5 | -0.361 | 0.581 | -0.906 | -0.0954 | 0.0103 | -0.0175 | 1.85 | 23.18 | 734 | -- | -- |
| 38.07 | 0.287 | 10.5 | -0.36 | 0.581 | -0.913 | -0.0989 | -- | -0.0165 | 1.85 | 23.1 | 733 | -- | -- |
| 38.1 | 0.287 | 10.5 | -0.362 | 0.58 | -0.904 | -- | 0.0467 | -0.0163 | 1.8 | 23.1 | 736 | -- | -- |
| 38.1 | 0.287 | 10.5 | -0.358 | 0.581 | -0.911 | -- | -- | -0.0152 | 1.81 | 23.09 | 736 | -- | -- |
| 55.35 | 0.347 | 10.5 | -0.564 | -- | -1.06 | -- | 0.818 | -0.0769 | -- | 37.24 | 1030 | -- | -- |
| 48.63 | 0.327 | 10.5 | -0.12 | 0.645 | -- | -0.0905 | -- | 0.132 | 1.37 | -- | -- | -- | -- |
| 48.67 | 0.327 | 10.5 | -0.117 | 0.645 | -- | -- | -- | 0.132 | 1.34 | -- | -- | -- | -- |
| 55.92 | 0.348 | 10.5 | -0.397 | -- | -1.05 | -- | -- | -0.0325 | -- | 107.4 | 1025 | -- | -- |
| 41.02 | 0.298 | 10.5 | -- | 0.59 | -0.747 | -- | -- | 0.0468 | 1.74 | 23.23 | 713 | -- | -- |
| 74.32 | 0.403 | 10.5 | -0.0918 | -- | -- | -- | -- | 0.146 | -- | -- | -- | -- | -- |
| 49.03 | 0.328 | 10.5 | -- | 0.643 | -- | -- | -- | 0.145 | 1.33 | -- | -- | -- | -- |
| 59.58 | 0.36 | 10.5 | -- | -- | -0.893 | -- | -- | 0.034 | -- | 43.66 | 1014 | -- | -- |
| 74.54 | 0.403 | 10.5 | -- | -- | -- | -- | -- | 0.156 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.02 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 17 |
| 8 | 33.93 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 8 |
| 11 | 34.06 | temperature | 20.0 | 270 | > th | dose independent | rect. | 2 | 16 |
| 16 | 34.20 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 20 |
| 17 | 34.24 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 20 | 34.30 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 20 |
| 30 | 34.50 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 18 |
| 50 | 35.00 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 59 | 35.13 | temperature | 10.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 81 | 35.49 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 8 |
| 85 | 35.52 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 94 | 35.59 | temperature | 20.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 103 | 35.68 | temperature | 20.0 | 30 | > th | dose independent | rect. | 15 | 18 |
| 105 | 35.70 | radiation | 20.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 118 | 35.84 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 8 |
| 129 | 35.87 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 139 | 35.91 | humidity | 80.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 161 | 36.02 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 23 | 9 |
| 178 | 36.12 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 24 | 8 |
| 231 | 36.34 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 232 | 36.34 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 15 | 17 |
| 242 | 36.39 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 16 |
| 243 | 36.39 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 16 |
| 264 | 36.48 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 266 | 36.48 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 267 | 36.48 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 269 | 36.48 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 270 | 36.48 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 271 | 36.48 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 16 |
| 273 | 36.49 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 284 | 36.52 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 302 | 36.57 | temperature | 20.0 | 720 | > th | dose independent | rect. | 20 | 15 |
| 319 | 36.61 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 9 | 17 |
| 338 | 36.65 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 8 | 16 |
| 343 | 36.66 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 345 | 36.66 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 346 | 36.66 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 348 | 36.66 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 351 | 36.67 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 8 |
| 352 | 36.67 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 16 |
| 355 | 36.67 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 8 |
| 359 | 36.68 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 16 |
| 361 | 36.68 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 17 |
| 363 | 36.68 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 16 |
| 374 | 36.71 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 7 |
| 375 | 36.71 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 376 | 36.71 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 408 | 36.78 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 8 |
| 411 | 36.78 | temperature | 20.0 | 30 | > th | dose independent | rect. | 12 | 21 |
| 418 | 36.81 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 8 |
| 434 | 36.85 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 440 | 36.86 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 444 | 36.86 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 16 | 17 |
| 449 | 36.87 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 16 |
| 450 | 36.87 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 16 |
| 478 | 36.93 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 491 | 36.95 | temperature | 20.0 | 720 | > th | dose independent | sin | 9 | NA |
| 501 | 36.98 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 502 | 36.98 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 509 | 37.01 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 557 | 37.06 | wind | 9.0 | 270 | < th | dose independent | rect. | 20 | 16 |
| 599 | 37.11 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 1 | 8 |
| 603 | 37.12 | radiation | 30.0 | 90 | < th | dose independent | rect. | 15 | 18 |
| 608 | 37.12 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 614 | 37.14 | radiation | 30.0 | 90 | < th | dose independent | rect. | 13 | 20 |
| 625 | 37.16 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 8 |
| 628 | 37.16 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 766 | 37.29 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 767 | 37.29 | radiation | 1.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 779 | 37.30 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 17 |
| 782 | 37.30 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 789 | 37.32 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 7 |
| 790 | 37.32 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 7 |
| 799 | 37.32 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 13 | 6 |
| 806 | 37.33 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 10 | 7 |
| 843 | 37.35 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 13 | 20 |
| 846 | 37.36 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 7 |
| 847 | 37.36 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 8 |
| 852 | 37.36 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 8 |
| 859 | 37.36 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 13 | 22 |
| 924 | 37.42 | radiation | 1.0 | 270 | < th | dose independent | rect. | 18 | 8 |
| 946 | 37.44 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 4 |
| 981 | 37.46 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 13 |
| 995 | 37.47 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 16 |
| 996 | 37.47 | temperature | 30.0 | 720 | < th | dose dependent | sin | 9 | NA |
| 999 | 37.47 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 18 | 8 |