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Os02g0741700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.49 (0.0406) R2 : 0.763
β1 : -4.19 (0.152) R2dD : 0.437 R2D : 0.295
β2 : 3.1 (0.176) R2dC : 0.55 R2C : -0.634
β3 : 3.14 (0.148) R2dE : 0.797 R2E : -0.419
β4 : 6.3 (0.671) R2dD*C : 0.158 R2D*C : -0.017
β5 : 3.12 (0.595) R2dD*E : 0.0487 R2D*E : -0.151
γ1 : -1.44 (0.0862) R2dN8 : 0.194 R2N8 : 0.041
σ : 0.759
deviance : 260.87
__
_____
C
peak time of C : 23.7
E
wheather : temperature
threshold : 15.59
memory length : 275
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 0.914
open length of G : 13

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
260.87 0.759 7.49 -4.19 3.1 3.14 6.3 3.12 -1.44 23.7 15.59 275 0.914 13
280.36 0.78 7.52 -4.28 3.26 3.39 3.72 -- -1.34 23.4 14.82 237 1.29 12.4
305.16 0.814 7.51 -4.02 3.34 3.19 -- -1.38 -1.37 23.9 14.11 218 1.62 13.2
311.47 0.822 7.54 -4.39 4.11 4.1 -- -- -1.4 23.2 14.8 313 0.617 12.8
433.81 0.975 7.42 -4.24 -- 1.04 -- -0.855 -1.32 -- 14.11 218 1.62 13.2
334.58 0.858 7.4 -4.31 2.02 -- 2.03 -- -1.43 5.5 -- -- -- --
342.5 0.867 7.4 -4.3 2.05 -- -- -- -1.44 5.85 -- -- -- --
423.6 0.959 7.41 -4.32 -- 1.12 -- -- -1.38 -- 15.42 25 0.0151 14.4
805.85 1.32 7.45 -- 4.12 4.12 -- -- -0.952 23.3 13.91 329 0.667 12.8
560.64 1.11 7.44 -4.24 -- -- -- -- -1.39 -- -- -- -- --
830.5 1.35 7.3 -- 1.99 -- -- -- -0.956 5.95 -- -- -- --
903.59 1.4 7.33 -- -- 1.11 -- -- -0.918 -- 11.05 14 0.0163 14.7
1034.97 1.5 7.33 -- -- -- -- -- -0.917 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 262.71 temperature 15.0 270 > th dose independent rect. 1 13
2 262.85 temperature 15.0 720 > th dose independent rect. 21 14
3 263.71 temperature 15.0 720 > th dose independent rect. 23 10
4 266.40 wind 9.0 270 < th dose independent rect. 14 11
5 266.81 precipitation 0.1 270 < th dose independent rect. 1 13
6 266.81 precipitation 0.1 270 < th dose dependent rect. 1 13
7 266.86 temperature 30.0 720 < th dose independent rect. 23 10
11 267.09 wind 7.0 720 < th dose independent rect. 5 5
12 267.19 wind 7.0 720 < th dose independent rect. 23 10
13 267.30 wind 7.0 720 < th dose independent rect. 21 14
14 267.62 temperature 10.0 270 > th dose independent rect. 14 11
16 267.62 atmosphere 995.0 270 > th dose independent rect. 1 13
17 267.62 atmosphere 1015.0 270 < th dose independent rect. 1 13
18 267.67 wind 7.0 270 < th dose independent rect. 5 13
19 267.72 precipitation 0.1 720 < th dose independent rect. 17 5
20 267.72 precipitation 0.1 720 < th dose dependent rect. 17 5
25 268.49 radiation 1.0 270 > th dose independent rect. 5 5
36 268.52 temperature 10.0 720 > th dose independent rect. 11 10
38 268.52 atmosphere 995.0 720 > th dose independent rect. 21 14
39 268.54 precipitation 0.1 720 < th dose independent rect. 5 5
40 268.54 precipitation 0.1 720 < th dose dependent rect. 5 5
42 268.67 precipitation 0.1 720 < th dose independent rect. 10 12
43 268.67 precipitation 0.1 720 < th dose dependent rect. 10 12
44 268.75 radiation 40.0 720 < th dose independent rect. 23 10
45 268.79 wind 9.0 720 < th dose independent rect. 22 19
46 268.81 radiation 10.0 720 < th dose independent rect. 17 5
48 268.89 temperature 15.0 720 > th dose independent rect. 9 14
51 269.07 humidity 50.0 720 > th dose independent rect. 23 10
52 269.07 atmosphere 995.0 720 > th dose independent rect. 23 10
54 269.10 atmosphere 1015.0 720 < th dose independent rect. 2 3
55 269.12 temperature 10.0 720 > th dose independent rect. 17 5
58 269.12 temperature 10.0 720 > th dose independent rect. 22 19
60 269.14 temperature 10.0 720 > th dose independent rect. 5 5
61 269.14 atmosphere 995.0 720 > th dose independent rect. 5 5
62 269.14 atmosphere 1015.0 720 < th dose independent rect. 5 5
63 269.14 temperature 10.0 720 > th dose independent rect. 10 19
64 269.15 wind 9.0 270 < th dose independent rect. 1 13
66 269.16 wind 9.0 720 < th dose independent rect. 17 5
67 269.19 radiation 1.0 270 > th dose independent rect. 6 3
69 269.31 wind 7.0 720 < th dose independent rect. 22 12
70 269.33 atmosphere 1015.0 720 < th dose independent rect. 23 10
71 269.37 humidity 90.0 90 < th dose independent rect. 7 4
72 269.39 radiation 40.0 270 < th dose independent rect. 14 11
73 269.42 temperature 15.0 720 > th dose independent rect. 2 3
74 269.50 radiation 1.0 270 > th dose independent sin 10 NA
75 269.64 humidity 50.0 720 > th dose independent rect. 5 5
79 269.89 radiation 1.0 90 > th dose dependent rect. 6 5
82 270.02 atmosphere 1015.0 720 < th dose independent rect. 2 10
108 270.37 radiation 1.0 270 < th dose independent rect. 18 13
113 270.59 radiation 1.0 270 < th dose independent sin 10 NA
115 270.77 radiation 40.0 720 < th dose dependent rect. 17 5
116 270.81 precipitation 0.1 270 < th dose independent rect. 18 11
118 270.81 precipitation 0.1 270 < th dose dependent rect. 18 11
121 270.84 wind 1.0 720 > th dose independent rect. 17 5
124 271.03 radiation 1.0 270 < th dose dependent sin 9 NA
125 271.04 wind 7.0 270 < th dose independent rect. 18 11
126 271.05 precipitation 0.1 720 < th dose independent rect. 10 19
127 271.05 precipitation 0.1 720 < th dose dependent rect. 10 19
130 271.19 atmosphere 1015.0 720 < th dose independent rect. 22 12
134 271.39 precipitation 0.1 270 < th dose independent rect. 5 13
135 271.39 precipitation 0.1 270 < th dose dependent rect. 5 13
143 271.61 temperature 10.0 720 > th dose independent rect. 10 12
145 271.61 atmosphere 995.0 720 > th dose independent rect. 22 12
148 271.67 radiation 40.0 90 < th dose dependent sin 10 NA
149 271.68 radiation 1.0 90 > th dose dependent rect. 15 20
150 271.71 temperature 20.0 720 > th dose independent rect. 7 3
151 271.72 wind 5.0 270 < th dose independent rect. 6 3
165 271.81 humidity 50.0 720 > th dose independent rect. 17 5
166 271.82 wind 9.0 270 < th dose dependent rect. 6 3
187 272.08 radiation 40.0 270 < th dose dependent rect. 17 12
191 272.17 radiation 1.0 270 < th dose dependent rect. 18 13
192 272.18 temperature 10.0 270 > th dose independent rect. 18 11
193 272.18 humidity 50.0 270 > th dose independent rect. 18 11
197 272.18 temperature 10.0 270 > th dose independent rect. 5 13
198 272.18 atmosphere 1015.0 270 < th dose independent rect. 5 13
207 272.32 temperature 20.0 10 > th dose independent rect. 7 13
221 272.54 precipitation 0.1 270 < th dose independent rect. 6 3
222 272.54 precipitation 0.1 270 < th dose dependent rect. 6 3
224 272.64 temperature 30.0 270 < th dose independent rect. 6 3
231 272.84 temperature 10.0 270 > th dose independent rect. 6 3
233 272.84 humidity 50.0 270 > th dose independent rect. 6 3
234 272.84 atmosphere 995.0 270 > th dose independent rect. 6 3
235 272.84 atmosphere 1015.0 270 < th dose independent rect. 6 3
242 272.90 temperature 10.0 270 > th dose dependent rect. 6 3
244 272.94 temperature 20.0 90 > th dose independent rect. 7 13
248 272.97 atmosphere 1015.0 720 < th dose independent rect. 1 5
259 273.11 precipitation 0.1 270 < th dose independent rect. 14 11
260 273.11 precipitation 0.1 270 < th dose dependent rect. 14 11
262 273.16 temperature 20.0 720 > th dose independent rect. 7 10
268 273.26 radiation 1.0 270 > th dose independent rect. 14 21
271 273.37 atmosphere 995.0 270 > th dose independent rect. 18 11
280 273.55 temperature 15.0 720 > th dose independent rect. 1 5
283 273.60 wind 9.0 270 < th dose independent rect. 9 21
284 273.65 precipitation 0.1 720 < th dose independent rect. 22 12
286 273.65 precipitation 0.1 720 < th dose dependent rect. 22 12
300 273.78 wind 9.0 720 < th dose independent rect. 10 19
310 273.87 atmosphere 1015.0 720 < th dose independent rect. 11 10
316 273.92 wind 9.0 720 < th dose independent rect. 10 12
333 274.10 atmosphere 995.0 270 > th dose independent rect. 14 11
354 274.33 wind 9.0 720 < th dose independent rect. 2 3
356 274.33 temperature 30.0 720 < th dose independent rect. 2 3
357 274.33 humidity 50.0 720 > th dose independent rect. 2 3
360 274.33 atmosphere 995.0 720 > th dose independent rect. 2 3
361 274.33 radiation 20.0 720 < th dose independent rect. 2 3
365 274.33 temperature 10.0 720 > th dose independent rect. 5 21
369 274.36 radiation 40.0 720 < th dose dependent rect. 2 3
387 274.47 wind 9.0 720 < th dose independent rect. 11 10
389 274.53 radiation 40.0 270 < th dose independent rect. 6 3
391 274.58 temperature 10.0 720 > th dose independent rect. 14 3
392 274.58 atmosphere 1015.0 720 < th dose independent rect. 14 3
395 274.58 temperature 10.0 720 > th dose independent rect. 17 21
427 274.82 humidity 50.0 270 > th dose independent rect. 1 13
438 274.91 radiation 1.0 90 > th dose dependent sin 10 NA
439 274.92 radiation 1.0 270 > th dose independent rect. 15 19
448 274.98 wind 9.0 720 < th dose independent rect. 14 3
450 274.99 wind 9.0 720 < th dose independent rect. 7 10
456 275.13 atmosphere 995.0 270 > th dose independent rect. 5 12
462 275.21 temperature 30.0 720 < th dose independent rect. 5 5
464 275.23 precipitation 0.1 90 < th dose independent rect. 20 11
466 275.23 precipitation 0.1 90 < th dose dependent rect. 20 11
477 275.39 humidity 90.0 90 < th dose dependent rect. 7 4
496 275.63 temperature 15.0 90 > th dose independent rect. 3 12
506 275.66 radiation 1.0 270 < th dose dependent rect. 24 23
507 275.67 temperature 30.0 270 < th dose independent rect. 18 11
515 275.75 humidity 90.0 270 < th dose independent rect. 7 2
523 275.79 radiation 30.0 90 < th dose dependent rect. 20 11
545 276.05 atmosphere 1015.0 720 < th dose independent rect. 17 5
562 276.11 wind 7.0 90 < th dose independent rect. 20 11
570 276.19 radiation 20.0 90 < th dose independent sin 11 NA
572 276.25 precipitation 0.1 720 < th dose independent rect. 2 3
573 276.25 atmosphere 1015.0 720 < th dose independent rect. 22 20
574 276.25 precipitation 0.1 720 < th dose dependent rect. 2 3
584 276.34 atmosphere 995.0 720 > th dose independent rect. 22 19
593 276.44 humidity 50.0 270 > th dose independent rect. 10 20
595 276.45 atmosphere 995.0 720 > th dose independent rect. 18 4
614 276.65 radiation 30.0 720 < th dose independent rect. 17 14
615 276.65 wind 9.0 270 < th dose dependent rect. 5 13
616 276.66 precipitation 0.1 720 < th dose independent rect. 17 21
617 276.66 precipitation 0.1 720 < th dose dependent rect. 17 21
619 276.69 atmosphere 1015.0 720 < th dose independent rect. 7 10
621 276.69 temperature 10.0 720 > th dose independent rect. 17 14
674 277.00 wind 1.0 720 > th dose independent rect. 10 12
676 277.03 wind 9.0 720 < th dose independent rect. 5 21
701 277.13 temperature 10.0 90 > th dose independent rect. 20 11
703 277.13 temperature 30.0 90 < th dose independent rect. 20 11
704 277.13 humidity 50.0 90 > th dose independent rect. 20 11
706 277.13 atmosphere 995.0 90 > th dose independent rect. 20 11
711 277.13 atmosphere 1015.0 90 < th dose independent rect. 7 13
730 277.25 wind 9.0 720 < th dose independent rect. 17 14
776 277.51 wind 1.0 720 > th dose independent rect. 14 3
785 277.56 wind 1.0 270 > th dose independent rect. 14 11
801 277.64 humidity 50.0 720 > th dose independent rect. 2 10
810 277.75 temperature 10.0 720 > th dose independent rect. 2 10
811 277.75 atmosphere 995.0 720 > th dose independent rect. 2 10
812 277.75 temperature 10.0 720 > th dose independent rect. 12 14
824 277.90 precipitation 0.1 10 < th dose independent rect. 20 11
825 277.90 precipitation 0.1 10 < th dose dependent rect. 20 11
829 277.92 radiation 40.0 720 < th dose independent rect. 14 3
841 277.96 humidity 90.0 10 < th dose independent rect. 7 5
845 277.99 precipitation 0.1 720 < th dose independent rect. 22 19
846 277.99 precipitation 0.1 720 < th dose dependent rect. 22 19
857 278.06 temperature 15.0 720 > th dose independent rect. 18 19
862 278.11 wind 9.0 720 < th dose independent rect. 17 21
886 278.25 wind 9.0 10 < th dose independent rect. 7 13
919 278.36 wind 9.0 720 < th dose independent rect. 2 10
964 278.50 radiation 30.0 720 < th dose dependent rect. 1 5
996 278.62 temperature 30.0 720 < th dose independent rect. 19 2
998 278.62 atmosphere 995.0 720 > th dose independent rect. 19 2