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Os02g0731700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to CONSTANS-like 1 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0445) R2 : 0.848
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.71 (0.199) R2dC : 0.0752 R2C : 0.378
β3 : -5.32 (0.253) R2dE : 0.458 R2E : 0.769
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.361 (0.0941) R2dN8 : 0.00602 R2N8 : 0.00932
σ : 0.833
deviance : 320.04
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_____
C
peak time of C : 19.9
E
wheather : temperature
threshold : 35.15
memory length : 219
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 3.42
open length of G : 7.78

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
312.16 0.83 10.8 0.638 1.73 -5.39 0.714 0.627 0.427 20.1 35.51 240 3.3 7.45
310.09 0.82 10.8 0.659 1.78 -5.22 0.275 -- 0.432 20 35.35 225 3.38 7.7
311.11 0.822 10.8 0.663 1.7 -5.2 -- 0.207 0.479 20 36.33 226 3.33 7.67
310.05 0.82 10.8 0.621 1.75 -5.23 -- -- 0.433 20 35.38 221 3.4 7.7
343.06 0.863 10.7 0.822 -- -5.87 -- 0.356 0.605 -- 44.31 205 3.17 8.07
539.99 1.09 10.8 1.05 5.17 -- -0.651 -- 0.7 20.6 -- -- -- --
541.38 1.09 10.8 1.07 5.17 -- -- -- 0.699 20.6 -- -- -- --
328.59 0.844 10.8 0.653 -- -6.53 -- -- 0.293 -- 39.08 238 2.8 8.18
320.04 0.833 10.8 -- 1.71 -5.32 -- -- 0.361 19.9 35.15 219 3.42 7.78
2048.96 2.12 10.7 1.05 -- -- -- -- 0.655 -- -- -- -- --
571.43 1.12 10.9 -- 5.17 -- -- -- 0.58 20.7 -- -- -- --
336.31 0.854 10.8 -- -- -6.62 -- -- 0.332 -- 38.93 245 2.72 8.35
2078.24 2.13 10.7 -- -- -- -- -- 0.538 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 332.94 temperature 30.0 270 < th dose dependent rect. 4 6
5 346.65 temperature 10.0 270 > th dose dependent rect. 23 15
18 364.39 temperature 25.0 270 < th dose independent rect. 4 6
20 365.52 radiation 10.0 10 < th dose dependent sin 7 NA
51 383.46 radiation 1.0 30 < th dose independent sin 6 NA
53 383.69 radiation 1.0 30 > th dose independent sin 6 NA
62 385.82 temperature 30.0 10 < th dose independent rect. 5 8
71 387.35 radiation 10.0 10 < th dose dependent rect. 23 16
83 390.58 radiation 1.0 90 < th dose independent rect. 23 17
95 392.94 radiation 1.0 90 < th dose dependent rect. 23 17
99 393.53 temperature 10.0 270 > th dose dependent rect. 7 9
125 396.56 temperature 15.0 270 > th dose independent rect. 23 15
127 396.74 atmosphere 995.0 10 > th dose dependent rect. 5 8
131 397.58 radiation 1.0 90 < th dose independent rect. 23 9
147 399.65 radiation 10.0 10 < th dose dependent rect. 23 13
153 400.15 radiation 1.0 90 < th dose dependent rect. 23 9
167 401.39 wind 7.0 270 < th dose independent rect. 23 15
202 404.66 radiation 1.0 10 > th dose independent rect. 5 7
214 404.82 temperature 30.0 270 < th dose dependent rect. 4 17
215 404.91 atmosphere 995.0 270 > th dose dependent rect. 3 7
276 407.68 precipitation 0.1 270 < th dose independent rect. 3 7
277 407.68 precipitation 0.1 270 < th dose dependent rect. 3 7
283 408.16 temperature 25.0 270 < th dose dependent rect. 7 1
292 409.22 atmosphere 1010.0 270 < th dose independent rect. 8 8
333 410.46 precipitation 0.1 270 < th dose independent rect. 4 17
334 410.46 precipitation 0.1 270 < th dose dependent rect. 4 17
343 411.01 atmosphere 1015.0 270 < th dose independent rect. 23 15
364 412.21 temperature 10.0 270 > th dose independent rect. 21 7
365 412.21 temperature 30.0 270 < th dose independent rect. 21 7
366 412.21 humidity 50.0 270 > th dose independent rect. 21 7
369 412.21 atmosphere 995.0 270 > th dose independent rect. 21 7
370 412.21 radiation 1.0 270 < th dose independent rect. 21 7
375 412.21 temperature 10.0 270 > th dose independent rect. 4 17
376 412.21 radiation 1.0 270 < th dose dependent rect. 21 7
386 412.54 wind 9.0 270 < th dose independent rect. 21 7
389 412.66 wind 9.0 270 < th dose independent rect. 14 9
391 412.70 humidity 50.0 270 > th dose independent rect. 23 15
394 413.02 atmosphere 995.0 10 > th dose dependent rect. 5 18
398 413.14 temperature 10.0 270 > th dose independent rect. 14 9
400 413.14 atmosphere 995.0 270 > th dose independent rect. 23 15
413 413.51 wind 9.0 270 < th dose independent rect. 10 17
423 414.01 temperature 30.0 270 < th dose dependent sin 4 NA
427 414.11 radiation 40.0 270 < th dose independent rect. 14 9
432 414.23 temperature 10.0 270 > th dose independent rect. 3 7
433 414.23 atmosphere 995.0 270 > th dose independent rect. 3 7
434 414.23 atmosphere 1015.0 270 < th dose independent rect. 3 7
435 414.23 temperature 10.0 270 > th dose independent rect. 10 17
447 414.83 humidity 50.0 270 > th dose dependent rect. 21 7
452 414.96 precipitation 0.1 270 < th dose independent rect. 3 19
453 414.96 precipitation 0.1 270 < th dose dependent rect. 3 19
456 415.03 wind 9.0 270 < th dose independent rect. 3 7
458 415.13 humidity 50.0 270 > th dose independent rect. 3 7
465 415.61 atmosphere 1015.0 270 < th dose independent rect. 21 7
485 416.57 atmosphere 1010.0 30 < th dose independent rect. 10 19
495 417.13 radiation 40.0 270 < th dose independent rect. 3 7
507 417.51 wind 9.0 270 < th dose independent rect. 4 17
508 417.61 precipitation 0.1 270 < th dose independent rect. 14 9
509 417.61 precipitation 0.1 270 < th dose dependent rect. 14 9
510 417.63 humidity 90.0 270 < th dose independent rect. 9 7
512 417.64 temperature 15.0 270 > th dose independent rect. 8 9
526 418.10 precipitation 0.1 10 < th dose independent rect. 5 7
527 418.10 precipitation 0.1 10 < th dose dependent rect. 5 7
531 418.28 atmosphere 1015.0 270 < th dose independent rect. 4 17
535 418.38 temperature 10.0 270 > th dose dependent sin 5 NA
537 418.46 temperature 15.0 270 > th dose independent rect. 9 7
540 418.58 precipitation 0.1 270 < th dose independent rect. 10 17
541 418.58 precipitation 0.1 270 < th dose dependent rect. 10 17
549 418.67 precipitation 0.1 270 < th dose independent rect. 21 7
550 418.67 precipitation 0.1 270 < th dose dependent rect. 21 7
570 419.19 humidity 50.0 270 > th dose dependent rect. 22 5
589 419.70 wind 1.0 270 > th dose independent rect. 14 9
590 419.73 temperature 10.0 10 > th dose independent rect. 5 7
592 419.73 atmosphere 995.0 10 > th dose independent rect. 5 7
593 419.73 atmosphere 1015.0 10 < th dose independent rect. 5 7
594 419.73 temperature 10.0 10 > th dose independent rect. 12 17
598 419.87 atmosphere 1015.0 270 < th dose independent rect. 22 5
612 420.22 atmosphere 1010.0 90 < th dose independent rect. 11 17
634 420.96 temperature 10.0 270 > th dose independent rect. 22 5
635 420.96 temperature 30.0 270 < th dose independent rect. 22 5
636 420.96 humidity 50.0 270 > th dose independent rect. 22 5
639 420.96 atmosphere 995.0 270 > th dose independent rect. 22 5
640 420.96 radiation 1.0 270 < th dose independent rect. 22 5
645 420.96 temperature 10.0 270 > th dose independent rect. 3 19
646 420.96 radiation 1.0 270 < th dose dependent rect. 22 5
651 421.08 wind 9.0 270 < th dose independent rect. 22 5
652 421.14 precipitation 0.1 270 < th dose independent rect. 2 21
653 421.14 precipitation 0.1 270 < th dose dependent rect. 2 21
665 421.39 atmosphere 995.0 270 > th dose independent rect. 10 17
668 421.45 precipitation 0.1 270 < th dose independent rect. 22 5
669 421.45 precipitation 0.1 270 < th dose dependent rect. 22 5
689 421.98 wind 9.0 10 < th dose independent rect. 12 17
690 421.98 atmosphere 1015.0 10 < th dose independent rect. 12 17
723 422.86 atmosphere 995.0 10 > th dose independent rect. 12 17
746 423.00 temperature 25.0 270 > th dose independent rect. 8 7
801 423.70 precipitation 0.1 270 < th dose independent rect. 23 15
802 423.70 precipitation 0.1 270 < th dose dependent rect. 23 15
809 423.81 atmosphere 1015.0 10 < th dose dependent rect. 10 19
811 423.84 humidity 50.0 270 > th dose dependent rect. 23 3
812 423.88 temperature 10.0 270 > th dose dependent rect. 23 3
852 424.53 temperature 10.0 270 > th dose dependent rect. 22 5
865 424.77 atmosphere 1015.0 270 < th dose independent rect. 23 3
868 424.87 temperature 10.0 10 > th dose dependent rect. 10 19
880 425.20 radiation 40.0 30 < th dose independent rect. 12 17
889 425.43 wind 9.0 270 < th dose independent rect. 3 19
891 425.48 temperature 10.0 270 > th dose dependent rect. 21 7
911 426.00 wind 9.0 10 < th dose independent rect. 5 7
921 426.13 temperature 10.0 270 > th dose independent rect. 23 3
922 426.13 temperature 30.0 270 < th dose independent rect. 23 3
923 426.13 humidity 50.0 270 > th dose independent rect. 23 3
927 426.13 atmosphere 995.0 270 > th dose independent rect. 23 3
928 426.13 radiation 1.0 270 < th dose independent rect. 23 3
933 426.13 temperature 10.0 270 > th dose independent rect. 2 21
934 426.13 radiation 1.0 270 < th dose dependent rect. 23 3
947 426.23 wind 9.0 270 < th dose independent rect. 23 3
969 426.66 precipitation 0.1 270 < th dose independent rect. 23 3
970 426.66 precipitation 0.1 270 < th dose dependent rect. 23 3
974 426.73 wind 7.0 270 < th dose independent rect. 9 7