Os02g0731600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0731600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.99 | 0.379 | 14.1 | -0.998 | 1.15 | -0.0903 | 0.178 | -4.52 | -0.909 | 8.47 | 29.97 | 3670 | -- | -- |
| 65.84 | 0.378 | 14.3 | -1.66 | 1.17 | -0.45 | 0.192 | -- | -1.15 | 8.43 | 29.3 | 7255 | -- | -- |
| 65.09 | 0.376 | 14.1 | -0.998 | 1.15 | -0.0931 | -- | -4.49 | -0.909 | 8.48 | 29.97 | 3669 | -- | -- |
| 65.6 | 0.377 | 14.3 | -1.75 | 1.17 | -0.468 | -- | -- | -1.15 | 8.36 | 29.3 | 7237 | -- | -- |
| 136.22 | 0.544 | 14.1 | -0.769 | -- | 0.0635 | -- | -4.45 | -0.88 | -- | 29.9 | 2947 | -- | -- |
| 78.26 | 0.415 | 14.2 | -1.58 | 1.13 | -- | 0.129 | -- | -1.03 | 8.31 | -- | -- | -- | -- |
| 78.31 | 0.414 | 14.2 | -1.58 | 1.13 | -- | -- | -- | -1.03 | 8.32 | -- | -- | -- | -- |
| 135.79 | 0.543 | 14.3 | -1.74 | -- | -0.517 | -- | -- | -1.14 | -- | 29.3 | 7215 | -- | -- |
| 141.38 | 0.554 | 14.2 | -- | 1.14 | -0.211 | -- | -- | -0.893 | 8.45 | 29.4 | 7236 | -- | -- |
| 149.39 | 0.571 | 14.3 | -1.57 | -- | -- | -- | -- | -1.02 | -- | -- | -- | -- | -- |
| 143.73 | 0.561 | 14.2 | -- | 1.12 | -- | -- | -- | -0.854 | 8.42 | -- | -- | -- | -- |
| 195.44 | 0.651 | 14.2 | -- | -- | 0.605 | -- | -- | -0.655 | -- | 26.2 | 620 | -- | -- |
| 214.27 | 0.683 | 14.2 | -- | -- | -- | -- | -- | -0.843 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.97 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 8 | 60.64 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 12 | 60.81 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 13 | 60.81 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 37 | 62.13 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 12 |
| 46 | 62.25 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 7 |
| 48 | 62.31 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 58 | 62.46 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 64 | 62.51 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 67 | 62.55 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 7 |
| 68 | 62.58 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 15 |
| 78 | 62.67 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 82 | 62.71 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 84 | 62.72 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 91 | 62.80 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 97 | 62.86 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 101 | 62.93 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 104 | 62.95 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 109 | 62.96 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 113 | 62.97 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 124 | 63.06 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 147 | 63.23 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 172 | 63.33 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 3 | 10 |
| 179 | 63.34 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 3 | 10 |
| 245 | 63.45 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 246 | 63.45 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 276 | 63.48 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 6 | 11 |
| 285 | 63.49 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 6 | 11 |
| 326 | 63.52 | atmosphere | 1000.0 | 43200 | < th | dose independent | sin | 2 | NA |
| 327 | 63.52 | wind | 1.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 339 | 63.53 | atmosphere | 1000.0 | 43200 | > th | dose independent | sin | 2 | NA |
| 342 | 63.53 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 358 | 63.54 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 373 | 63.55 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 379 | 63.55 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 21 | NA |
| 396 | 63.57 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 402 | 63.58 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 5 | 15 |
| 415 | 63.59 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 4 | 16 |
| 533 | 63.69 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 540 | 63.69 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 586 | 63.73 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 616 | 63.76 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 4 | 9 |
| 626 | 63.77 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 649 | 63.79 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 6 | 6 |
| 663 | 63.80 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 18 | 20 |
| 679 | 63.81 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 693 | 63.82 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 18 | 23 |
| 730 | 63.84 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 18 | 19 |
| 754 | 63.85 | atmosphere | 1000.0 | 43200 | < th | dose dependent | sin | 3 | NA |
| 769 | 63.86 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 19 | 22 |
| 787 | 63.87 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 16 | 22 |
| 798 | 63.88 | atmosphere | 1000.0 | 43200 | < th | dose independent | no | NA | NA |
| 864 | 63.90 | atmosphere | 1000.0 | 43200 | > th | dose independent | no | NA | NA |
| 877 | 63.90 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 9 | 23 |
| 989 | 63.96 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |