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Os02g0726400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : BSD domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.17 (0.018) R2 : 0.116
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.292 (0.0378) R2dN8 : 0.149 R2N8 : 0.116
σ : 0.338
deviance : 52.55
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
30.6 0.26 9.19 0.495 0.0549 0.364 -0.648 -0.631 0.279 2.6 19.8 69 -- --
31.68 0.264 9.17 0.573 0.0772 0.471 -0.48 -- 0.302 3.08 19.3 44 -- --
31.33 0.261 9.18 0.547 0.116 0.376 -- -0.384 0.287 6.29 19.9 72 -- --
32 0.263 9.17 0.611 0.121 0.405 -- -- 0.301 6.07 20.01 76 -- --
32.01 0.264 9.18 0.554 -- 0.362 -- -0.407 0.292 -- 20 64 -- --
37.74 0.288 9.15 0.715 0.114 -- 0.253 -- 0.372 10 -- -- -- --
37.93 0.288 9.15 0.723 0.12 -- -- -- 0.372 8.92 -- -- -- --
32.76 0.267 9.17 0.617 -- 0.397 -- -- 0.306 -- 20 74 -- --
33.97 0.271 9.2 -- 0.163 0.81 -- -- 0.148 8.71 18.9 2376 -- --
38.75 0.291 9.16 0.723 -- -- -- -- 0.373 -- -- -- -- --
51.72 0.336 9.17 -- 0.122 -- -- -- 0.291 8.48 -- -- -- --
34.34 0.273 9.21 -- -- 0.93 -- -- 0.158 -- 18.4 8305 -- --
52.55 0.338 9.17 -- -- -- -- -- 0.292 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 27.33 radiation 20 1440 < th dose independent rect. 11 1
2 28.02 humidity 90 14400 > th dose dependent rect. 5 1
3 28.13 humidity 90 14400 > th dose dependent rect. 2 7
5 28.15 humidity 90 14400 > th dose dependent rect. 24 10
7 28.17 humidity 90 14400 > th dose dependent rect. 3 5
15 28.25 humidity 90 14400 > th dose dependent rect. 4 3
27 28.38 humidity 90 14400 > th dose dependent sin 7 NA
61 28.63 radiation 30 4320 < th dose independent rect. 16 16
91 28.79 humidity 90 14400 > th dose dependent rect. 22 5
94 28.80 temperature 20 1440 < th dose independent rect. 5 2
99 28.82 humidity 90 14400 > th dose dependent rect. 21 7
114 28.90 humidity 90 14400 > th dose dependent rect. 23 2
128 28.94 temperature 20 1440 > th dose independent rect. 5 2
130 28.96 wind 1 43200 > th dose independent rect. 2 1
178 29.15 humidity 90 14400 > th dose independent rect. 23 1
188 29.19 humidity 90 14400 > th dose independent rect. 23 9
216 29.30 humidity 90 14400 > th dose independent rect. 21 7
240 29.40 radiation 10 4320 < th dose dependent rect. 3 2
248 29.43 wind 1 43200 < th dose independent rect. 2 1
289 29.55 temperature 20 1440 > th dose independent rect. 21 3
292 29.55 temperature 20 1440 < th dose dependent rect. 3 2
303 29.58 humidity 90 14400 > th dose independent sin 9 NA
306 29.59 temperature 20 1440 < th dose independent rect. 22 2
312 29.60 humidity 90 14400 > th dose independent rect. 2 6
325 29.66 temperature 20 4320 > th dose independent rect. 18 5
328 29.66 humidity 90 14400 > th dose dependent no NA NA
332 29.68 temperature 20 30 > th dose independent rect. 5 23
338 29.70 wind 9 43200 > th dose dependent rect. 18 1
371 29.79 temperature 20 4320 < th dose independent rect. 18 5
372 29.79 radiation 20 43200 < th dose dependent rect. 13 1
383 29.82 radiation 30 14400 > th dose independent rect. 7 1
402 29.84 temperature 20 1440 < th dose independent rect. 21 13
409 29.86 temperature 20 1440 > th dose independent rect. 21 13
432 29.90 radiation 20 14400 > th dose dependent rect. 7 1
463 29.92 wind 1 14400 < th dose dependent rect. 19 7
479 29.95 humidity 70 43200 > th dose independent rect. 10 1
484 29.96 radiation 30 43200 < th dose independent rect. 24 7
494 29.97 radiation 30 43200 < th dose independent rect. 3 4
499 29.97 radiation 40 43200 < th dose dependent rect. 24 5
500 29.98 temperature 20 1440 < th dose independent sin 8 NA
516 29.99 temperature 20 4320 < th dose independent rect. 18 1
532 30.01 temperature 20 1440 > th dose independent sin 8 NA
534 30.01 humidity 50 43200 > th dose independent rect. 7 2
535 30.01 radiation 30 4320 < th dose independent rect. 6 2
549 30.02 temperature 20 90 > th dose independent rect. 12 23
554 30.03 radiation 30 4320 < th dose independent rect. 21 11
574 30.04 radiation 40 43200 < th dose dependent rect. 3 2
576 30.05 humidity 90 14400 < th dose independent rect. 23 2
580 30.05 radiation 30 4320 < th dose independent rect. 2 6
592 30.06 radiation 30 43200 < th dose independent rect. 20 11
606 30.07 wind 1 14400 < th dose dependent rect. 21 5
608 30.08 radiation 1 14400 > th dose independent rect. 18 1
636 30.09 wind 1 14400 < th dose dependent rect. 23 2
648 30.10 temperature 20 90 < th dose independent rect. 10 21
649 30.10 radiation 1 43200 < th dose dependent rect. 23 6
662 30.11 radiation 1 43200 < th dose dependent rect. 20 9
664 30.12 temperature 20 4320 > th dose independent rect. 18 1
674 30.13 temperature 20 1440 < th dose independent rect. 1 9
679 30.13 temperature 30 10 < th dose dependent rect. 7 23
712 30.17 radiation 20 43200 > th dose independent rect. 9 1
730 30.18 humidity 50 43200 > th dose dependent rect. 19 2
731 30.18 temperature 15 10 > th dose dependent rect. 5 23
732 30.19 wind 9 43200 > th dose independent rect. 18 1
734 30.19 temperature 20 1440 > th dose independent rect. 1 9
738 30.19 temperature 25 1440 < th dose dependent rect. 2 8
740 30.19 temperature 30 90 < th dose dependent rect. 7 22
743 30.20 wind 9 43200 < th dose independent rect. 10 2
768 30.21 temperature 25 1440 < th dose dependent rect. 21 13
773 30.22 wind 9 43200 < th dose independent rect. 18 1
774 30.22 humidity 50 43200 < th dose independent rect. 7 2
784 30.22 radiation 40 43200 < th dose dependent rect. 19 10
792 30.23 wind 7 43200 > th dose dependent rect. 10 3
805 30.24 temperature 30 1440 < th dose dependent rect. 5 1
812 30.25 wind 7 43200 > th dose independent rect. 10 2
817 30.25 humidity 70 43200 > th dose independent rect. 3 12
861 30.27 temperature 30 90 < th dose dependent rect. 9 20
927 30.29 temperature 25 1440 < th dose dependent rect. 20 10
958 30.31 radiation 1 14400 < th dose independent rect. 18 11
962 30.31 radiation 20 1440 < th dose dependent rect. 11 1
970 30.32 humidity 70 43200 < th dose independent rect. 10 2
975 30.32 temperature 25 1440 < th dose dependent sin 9 NA
977 30.32 humidity 50 43200 > th dose dependent rect. 18 4