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Os02g0724000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc finger, B-box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0282) R2 : 0.954
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -5.47 (0.0564) R2dE : 0.953 R2E : 0.953
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.145 (0.0593) R2dN8 : 0.000777 R2N8 : 0.00065
σ : 0.53
deviance : 129.35
__
_____
C
peak time of C : --
E
wheather : precipitation
threshold : 0.4678
memory length : 238
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 3.73
open length of G : 9.64

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
113.96 0.502 11.4 -0.675 1.11 -4.69 0.583 -0.148 -0.253 21.7 0.4983 252 4.08 9.08
113.9 0.497 11.4 -0.672 1.09 -4.7 0.677 -- -0.253 21.6 0.5 249 4.1 9.1
113.95 0.497 11.4 -0.686 1.08 -4.71 -- -0.539 -0.245 21.7 0.4984 249 4.13 9.06
115.82 0.501 11.4 -0.708 1.12 -4.68 -- -- -0.269 21.7 0.2352 248 4.14 9.05
121.52 0.513 11.3 -0.56 -- -5.35 -- -0.366 -0.131 -- 0.5001 204 4.15 9.41
310.81 0.826 11.5 -0.538 6.34 -- 0.755 -- -0.23 22.6 -- -- -- --
313.17 0.829 11.5 -0.568 6.34 -- -- -- -0.232 22.6 -- -- -- --
117.14 0.504 11.4 -0.729 -- -5.51 -- -- -0.241 -- 0.4998 246 3.77 9.52
128.68 0.528 11.4 -- 1.24 -4.55 -- -- -0.177 21.8 0.418 242 4.2 9.02
2788.28 2.47 11.4 -0.449 -- -- -- -- -0.2 -- -- -- -- --
321.69 0.839 11.5 -- 6.33 -- -- -- -0.169 22.6 -- -- -- --
129.35 0.53 11.3 -- -- -5.47 -- -- -0.145 -- 0.4678 238 3.73 9.64
2793.59 2.47 11.3 -- -- -- -- -- -0.15 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 116.02 precipitation 0.1 270 < th dose independent rect. 4 9
2 116.02 precipitation 0.1 270 < th dose dependent rect. 4 9
3 116.82 temperature 10.0 270 > th dose independent rect. 4 9
4 116.82 atmosphere 995.0 270 > th dose independent rect. 4 9
5 116.82 atmosphere 1015.0 270 < th dose independent rect. 4 9
6 116.82 temperature 10.0 270 > th dose independent rect. 13 15
7 118.34 wind 9.0 270 < th dose independent rect. 13 15
8 119.44 wind 9.0 270 < th dose independent rect. 4 9
9 120.43 wind 9.0 270 < th dose independent rect. 24 17
10 120.70 temperature 10.0 270 > th dose independent rect. 17 7
11 120.70 radiation 20.0 270 < th dose independent rect. 17 7
14 120.70 temperature 10.0 270 > th dose independent rect. 24 17
15 120.71 atmosphere 1015.0 270 < th dose independent rect. 24 17
16 120.85 radiation 40.0 270 < th dose dependent rect. 17 7
17 120.98 humidity 50.0 270 > th dose independent rect. 17 7
19 121.34 wind 9.0 270 < th dose independent rect. 17 7
22 122.69 precipitation 0.1 270 < th dose independent rect. 13 15
23 122.69 precipitation 0.1 270 < th dose dependent rect. 13 15
24 123.20 precipitation 0.1 270 < th dose independent rect. 24 17
25 123.20 precipitation 0.1 270 < th dose dependent rect. 24 17
26 123.49 atmosphere 995.0 270 > th dose independent rect. 17 7
34 125.63 humidity 50.0 270 > th dose independent rect. 4 9
35 125.65 precipitation 0.1 270 < th dose independent rect. 17 7
36 125.65 precipitation 0.1 270 < th dose dependent rect. 17 7
46 130.38 radiation 40.0 90 < th dose independent rect. 14 15
47 130.74 atmosphere 995.0 270 > th dose independent rect. 24 17
52 132.14 wind 1.0 270 > th dose independent rect. 17 7
56 132.67 wind 9.0 270 < th dose independent rect. 23 19
58 132.91 temperature 10.0 270 > th dose independent rect. 18 5
59 132.91 humidity 50.0 270 > th dose independent rect. 18 5
60 132.91 radiation 20.0 270 < th dose independent rect. 18 5
63 132.91 temperature 10.0 270 > th dose independent rect. 23 19
66 133.06 wind 9.0 270 < th dose independent rect. 18 5
69 133.16 atmosphere 995.0 270 > th dose independent rect. 18 5
85 134.95 temperature 10.0 90 > th dose independent rect. 15 14
90 135.23 atmosphere 1015.0 270 < th dose independent rect. 23 19
92 135.34 precipitation 0.1 270 < th dose independent rect. 23 19
93 135.34 precipitation 0.1 270 < th dose dependent rect. 23 19
94 135.46 wind 1.0 270 > th dose independent rect. 13 4
101 136.54 precipitation 0.1 270 < th dose independent rect. 18 5
102 136.54 precipitation 0.1 270 < th dose dependent rect. 18 5
106 137.45 radiation 1.0 90 > th dose independent rect. 4 11
129 137.87 temperature 10.0 270 > th dose independent rect. 13 4
131 137.87 atmosphere 1010.0 270 < th dose independent rect. 13 4
133 137.87 temperature 10.0 270 > th dose independent rect. 17 20
136 138.02 wind 9.0 90 < th dose independent rect. 15 14
137 138.07 wind 9.0 270 < th dose independent rect. 13 4
140 138.12 temperature 30.0 270 < th dose independent rect. 17 7
146 138.54 temperature 30.0 270 < th dose independent rect. 18 5
149 139.03 precipitation 0.1 270 < th dose independent rect. 13 4
150 139.03 precipitation 0.1 270 < th dose dependent rect. 13 4
153 139.47 wind 9.0 270 < th dose independent rect. 17 20
158 139.79 wind 1.0 270 > th dose independent rect. 18 5
162 140.20 atmosphere 995.0 270 > th dose independent rect. 17 20
173 141.29 humidity 50.0 270 > th dose independent rect. 17 20
206 142.47 precipitation 0.1 270 < th dose independent rect. 17 20
207 142.47 precipitation 0.1 270 < th dose dependent rect. 17 20
212 143.50 wind 1.0 270 > th dose independent rect. 12 6
272 146.49 atmosphere 995.0 270 > th dose independent rect. 13 15
275 146.80 precipitation 0.1 90 < th dose independent rect. 15 14
276 146.80 precipitation 0.1 90 < th dose dependent rect. 15 14
278 147.11 wind 9.0 270 < th dose independent rect. 12 6
280 147.24 temperature 10.0 270 > th dose independent rect. 12 6
282 147.24 atmosphere 1015.0 270 < th dose independent rect. 12 6
283 147.24 temperature 10.0 270 > th dose independent rect. 18 18
286 147.39 atmosphere 995.0 270 > th dose independent rect. 13 4
289 147.49 atmosphere 995.0 270 > th dose independent rect. 18 18
292 147.88 wind 9.0 270 < th dose independent rect. 18 18
293 148.02 precipitation 0.1 270 < th dose independent rect. 12 6
294 148.02 precipitation 0.1 270 < th dose dependent rect. 12 6
295 148.04 radiation 40.0 90 < th dose independent rect. 14 5
298 148.25 humidity 50.0 270 > th dose independent rect. 18 18
328 149.10 humidity 50.0 270 > th dose dependent rect. 18 5
329 149.15 atmosphere 1015.0 270 < th dose independent rect. 18 5
330 149.22 wind 1.0 270 > th dose independent rect. 14 2
338 149.81 atmosphere 1015.0 270 < th dose independent rect. 17 7
341 150.08 precipitation 0.1 270 < th dose independent rect. 14 2
342 150.08 precipitation 0.1 270 < th dose dependent rect. 14 2
344 150.10 temperature 10.0 270 > th dose independent rect. 14 2
346 150.10 atmosphere 1010.0 270 < th dose independent rect. 14 2
349 150.10 temperature 10.0 270 > th dose independent rect. 16 22
353 150.22 radiation 1.0 270 > th dose independent rect. 13 4
357 150.43 wind 9.0 270 < th dose independent rect. 14 2
368 150.90 precipitation 0.1 270 < th dose independent rect. 18 18
369 150.90 precipitation 0.1 270 < th dose dependent rect. 18 18
371 151.11 wind 9.0 270 < th dose dependent rect. 17 6
373 151.21 precipitation 0.1 10 < th dose independent rect. 6 9
374 151.21 precipitation 0.1 10 < th dose dependent rect. 6 9
394 151.53 temperature 10.0 10 > th dose independent rect. 6 9
396 151.53 atmosphere 995.0 10 > th dose independent rect. 6 9
397 151.53 atmosphere 1015.0 10 < th dose independent rect. 6 9
398 151.53 temperature 10.0 10 > th dose independent rect. 15 15
399 151.58 radiation 40.0 10 < th dose independent rect. 15 15
405 151.78 radiation 40.0 270 < th dose independent rect. 15 1
407 152.00 wind 1.0 270 > th dose independent rect. 13 15
449 152.96 radiation 1.0 10 > th dose independent rect. 6 9
457 153.25 radiation 40.0 10 < th dose dependent rect. 2 17
502 153.61 wind 9.0 10 < th dose independent rect. 2 17
540 154.26 wind 9.0 10 < th dose independent rect. 15 15
547 154.38 wind 9.0 270 < th dose independent rect. 16 22
586 154.93 precipitation 0.1 10 < th dose independent rect. 19 7
587 154.93 precipitation 0.1 10 < th dose dependent rect. 19 7
604 155.57 wind 9.0 10 < th dose independent rect. 6 9
628 155.98 humidity 50.0 10 > th dose dependent rect. 19 7
636 156.29 temperature 10.0 90 > th dose dependent rect. 14 15
640 156.54 atmosphere 995.0 90 > th dose independent rect. 15 14
654 157.24 radiation 40.0 270 < th dose dependent rect. 23 10
655 157.28 precipitation 0.1 270 < th dose independent rect. 19 3
656 157.28 precipitation 0.1 270 < th dose dependent rect. 19 3
675 157.98 humidity 90.0 270 < th dose independent rect. 13 4
689 158.33 atmosphere 995.0 270 > th dose independent rect. 12 6
692 158.42 temperature 10.0 1440 > th dose independent rect. 7 9
695 158.42 temperature 10.0 1440 > th dose independent rect. 16 15
702 158.64 wind 1.0 270 > th dose independent rect. 4 9
705 158.79 wind 1.0 270 > th dose independent rect. 24 17
712 159.04 precipitation 0.1 270 < th dose independent rect. 16 22
713 159.04 precipitation 0.1 270 < th dose dependent rect. 16 22
718 159.17 temperature 10.0 90 > th dose dependent rect. 5 9
761 160.13 radiation 1.0 270 > th dose independent rect. 14 2
791 160.63 radiation 40.0 90 < th dose independent rect. 1 18
794 160.72 temperature 10.0 10 > th dose dependent rect. 6 9
795 160.95 atmosphere 995.0 270 > th dose independent rect. 14 2
798 161.11 precipitation 0.1 10 < th dose independent rect. 15 15
799 161.11 precipitation 0.1 10 < th dose dependent rect. 15 15
823 161.69 atmosphere 1015.0 270 < th dose independent rect. 13 15
833 161.88 temperature 10.0 1440 > th dose independent rect. 20 7
836 161.88 temperature 30.0 1440 < th dose independent rect. 20 7
840 161.88 humidity 50.0 1440 > th dose independent rect. 20 7
846 161.88 atmosphere 995.0 1440 > th dose independent rect. 20 7
847 161.88 radiation 1.0 1440 < th dose independent rect. 20 7
867 161.88 temperature 10.0 1440 > th dose independent rect. 3 17
871 161.91 radiation 40.0 1440 < th dose dependent rect. 20 7
949 163.03 radiation 40.0 10 < th dose dependent rect. 14 16
960 163.32 temperature 10.0 270 > th dose dependent rect. 13 4
987 163.98 atmosphere 1015.0 270 < th dose independent rect. 19 3