BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0724000 Os02g0724000|AB001888
(407 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G07650.1 | chr3:2442494-2443901 FORWARD LENGTH=373 280 7e-76
AT5G48250.1 | chr5:19561719-19563113 REVERSE LENGTH=374 278 5e-75
AT3G21880.1 | chr3:7706748-7708093 FORWARD LENGTH=365 141 6e-34
AT4G15250.1 | chr4:8709942-8711106 REVERSE LENGTH=331 125 3e-29
AT2G33500.1 | chr2:14188159-14190046 REVERSE LENGTH=403 115 6e-26
AT1G68190.1 | chr1:25559384-25561004 FORWARD LENGTH=357 114 7e-26
AT1G28050.1 | chr1:9775768-9777657 REVERSE LENGTH=434 112 3e-25
AT2G47890.1 | chr2:19608245-19609476 FORWARD LENGTH=333 96 5e-20
AT5G24930.1 | chr5:8589325-8590949 FORWARD LENGTH=407 77 2e-14
AT5G15840.1 | chr5:5171343-5172697 REVERSE LENGTH=374 72 4e-13
AT5G15850.1 | chr5:5176297-5177473 REVERSE LENGTH=356 72 6e-13
AT2G24790.1 | chr2:10566959-10567946 FORWARD LENGTH=295 70 2e-12
AT3G02380.1 | chr3:487438-488624 REVERSE LENGTH=348 68 9e-12
AT1G75540.1 | chr1:28366059-28367398 FORWARD LENGTH=332 62 6e-10
AT5G57660.1 | chr5:23355573-23356729 FORWARD LENGTH=356 62 7e-10
AT2G21320.1 | chr2:9126502-9127652 FORWARD LENGTH=173 60 2e-09
AT2G31380.1 | chr2:13382150-13383302 FORWARD LENGTH=239 60 3e-09
AT1G06040.1 | chr1:1828662-1829659 REVERSE LENGTH=249 58 1e-08
AT4G15248.1 | chr4:8708881-8709234 FORWARD LENGTH=118 57 1e-08
AT4G39070.1 | chr4:18205061-18206421 REVERSE LENGTH=243 55 5e-08
AT1G78600.2 | chr1:29567370-29568662 FORWARD LENGTH=320 55 7e-08
AT1G60250.1 | chr1:22217077-22217832 REVERSE LENGTH=252 54 1e-07
AT4G27310.1 | chr4:13675853-13676616 FORWARD LENGTH=224 52 4e-07
AT1G25440.1 | chr1:8933939-8935284 REVERSE LENGTH=418 52 5e-07
AT1G68520.1 | chr1:25709331-25710749 REVERSE LENGTH=407 52 6e-07
AT4G10240.1 | chr4:6368967-6369526 REVERSE LENGTH=163 52 8e-07
>AT3G07650.1 | chr3:2442494-2443901 FORWARD LENGTH=373
Length = 372
Score = 280 bits (717), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 181/420 (43%), Positives = 223/420 (53%), Gaps = 61/420 (14%)
Query: 1 MDALCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCVGQPAAVRC 60
M +CDFC EQRSMVYCRSDAA LCLSCDR+VHSANALS+RH+RTL+C+RC QPA VRC
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRC 60
Query: 61 LEENTSLCQNCDWNXX---------XXXXXXXXXKRQTINCYSGCPSSAELSRIWSFSMD 111
+EE SLCQNCDW+ KRQTI+CYSGCPSS+EL+ IWSF +D
Sbjct: 61 VEERVSLCQNCDWSGHNNSNNNNSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLD 120
Query: 112 IPTVAAEPNCEEGINMMSINDNDVNNHCGAPEDGRLLDIASTALMSDLPTGDKFKPLIGS 171
+ A + CE+ + MM+I+D+ P D + + DK L+GS
Sbjct: 121 L---AGQSICEQELGMMNIDDD-------GPTDKKTCN------------EDKKDVLVGS 158
Query: 172 SSGDGMNLLPLNSDQPAEPVSTTPKAPCVTDKDMFNDGSVYGDFCVDDADLTFENYEELF 231
SS +P S P K+ D M D YG+ +D+ D+ ENYEELF
Sbjct: 159 SS------IPETSSVP------QGKSSSAKDVGMCED-DFYGNLGMDEVDMALENYEELF 205
Query: 232 GTSHVQTEQLFDDAGIDSYFEMKDVPADESNEQPKPVQPECSNVASVDSGMSNPAARADS 291
GT+ +E+LF GIDS F + N VQP SN DS MS ++ +
Sbjct: 206 GTAFNPSEELFGHGGIDSLFHKHQTAPEGGNS----VQPAGSN----DSFMS---SKTEP 254
Query: 292 SHCIPGRQAISNISLSFSGLTGESSAGYFQDCGVSSMI-LMGEPPWH---XXXXXXXXXX 347
C + A SNI SFSG+TGESSAG FQ+CG SS I L GEPPW+
Sbjct: 255 IICFASKPAHSNI--SFSGVTGESSAGDFQECGASSSIQLSGEPPWYPPTLQDNNACSHS 312
Query: 348 XXRDNALTXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXXXFVKAGEAYDYDPLSQTRSY 407
R+NA+ Y FVKAGEAYDYDPL+ TRSY
Sbjct: 313 VTRNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVKAGEAYDYDPLTPTRSY 372
>AT5G48250.1 | chr5:19561719-19563113 REVERSE LENGTH=374
Length = 373
Score = 278 bits (710), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 183/415 (44%), Positives = 225/415 (54%), Gaps = 50/415 (12%)
Query: 1 MDALCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCVGQPAAVRC 60
M +CDFC EQRSMVYCRSDAA LCLSCDRNVHSANALS+RH+RTL+C+RC QPA+VRC
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRC 60
Query: 61 LEENTSLCQNCDW--NXXXXXXXXXXXKRQTINCYSGCPSSAELSRIWSFSMDIPTVAAE 118
+E SLCQNCDW + KRQTINCYSGCPSSAELS IWSF MD+ +AE
Sbjct: 61 SDERVSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGCPSSAELSSIWSFCMDLNISSAE 120
Query: 119 PN-CEEGINMMSINDNDVNNHCGAPEDGRLLDIASTALMSDLPTGDKFKPLIGSSSGDGM 177
+ CE+G+ +M+I+ EDG T S + + +P SS+ GM
Sbjct: 121 ESACEQGMGLMTID-----------EDG-------TGEKSGVQKINVEQPET-SSAAQGM 161
Query: 178 NLLPLNSDQPAEPVSTTPKAPCVTDKDMFNDGSVYGDFCVDDADLTFENYEELFGTSHVQ 237
D + P +++ +D FN G+ D+ DL ENYEELFG++
Sbjct: 162 -------DHSSVPENSSMAKELGVCEDDFN-----GNLISDEVDLALENYEELFGSAFNS 209
Query: 238 TEQLFDDAGIDSYFEMKDVPADESNEQPKPVQPECSNVASVDSGMSNPAARADSSHCIPG 297
+ LF+ GI S FE DE++E QP SN AS DS M+ R + C
Sbjct: 210 SRYLFEHGGIGSLFE-----KDEAHEGSMQ-QPALSNNASADSFMT---CRTEPIICYSS 260
Query: 298 RQAISNISLSFSGLTGESSAGYFQDCGVSSMI-LMGEP-PW---HXXXXXXXXXXXXRDN 352
+ A SNIS FSG+TGES+AG FQDCG SSM L EP PW R+N
Sbjct: 261 KPAHSNIS--FSGITGESNAGDFQDCGASSMKQLSREPQPWCHPTAQDIIASSHATTRNN 318
Query: 353 ALTXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXXXFVKAGEAYDYDPLSQTRSY 407
A+ Y FVK+GEAYDYDP+S TRSY
Sbjct: 319 AVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVKSGEAYDYDPMSPTRSY 373
>AT3G21880.1 | chr3:7706748-7708093 FORWARD LENGTH=365
Length = 364
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 174/418 (41%), Gaps = 71/418 (16%)
Query: 1 MDALCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCVGQPAAVRC 60
M+ CD C ++++YC+SD A LCL+CD +VHSAN LS RH R+L+C++C QPAA+RC
Sbjct: 1 MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFSQPAAIRC 60
Query: 61 LEENTSLCQNCDWNXXXXXXXXXXXKRQTINCYSGCPSSAELSRIWSFSMDIPTVAAEPN 120
L+E S CQ C W+ + Q++N +SGCPS + +R+WS ++ P
Sbjct: 61 LDEKVSYCQGCHWH--ESNCSELGHRVQSLNPFSGCPSPTDFNRMWSSILEPPVSGL--- 115
Query: 121 CEEGINMMSINDNDVNNHCGAPEDGRLLDIASTALMSDLPTGDKFKPLIG--SSSGDGMN 178
+ S ND+NN + D A + + ++ F + S+ G
Sbjct: 116 --LSPFVGSFPLNDLNN--------TMFDTAYSMVPHNISYTQNFSDNLSFFSTESKGYP 165
Query: 179 LLPLNSDQPAEPVSTTPKAPCVTDKDMFNDGSVYGDFC----VDDADLTFENYEELFGTS 234
+ L ++ E D C +DDA L F+ +++ G S
Sbjct: 166 DMVLKLEEGEE------------------------DLCEGLNLDDAPLNFDVGDDIIGCS 201
Query: 235 ---HVQTEQ-----LFDDAGIDSYFEMKDVPADESNEQPKPVQPECSNVASVDSGMSNPA 286
H++ + L D S F + D++ E P Q ++++G+ P
Sbjct: 202 SEVHIEPDHTVPNCLLIDKTNTSSFTGSNFTVDKALEASPPGQ-----QMNINTGLQLPL 256
Query: 287 ARADSSHCIPGRQAISNISLSFSGLTGESSAGYFQDCGVSSMILMGEPPWHXXXXXXXXX 346
+ P +TGE++A +QDCG+S +M E PW
Sbjct: 257 SPVLFGQIHPSLN-----------ITGENNAADYQDCGMSPGFIMSEAPWE--TNFEVSC 303
Query: 347 XXXRDNALTXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXXXFVKAGEAYDYDPLSQT 404
R+ A Y FVKAG++YDYDP S T
Sbjct: 304 PQARNEAKLRYKEKKLKRSFGKQIRYASRKARADTRKRVKGRFVKAGDSYDYDPSSPT 361
>AT4G15250.1 | chr4:8709942-8711106 REVERSE LENGTH=331
Length = 330
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 82/117 (70%), Gaps = 3/117 (2%)
Query: 1 MDALCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCVGQPAAVRC 60
M+A CDFC +++++YC+SD+A LCL+CD NVHSAN LS+RHTR+LLC++C QP AV C
Sbjct: 1 MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTAVHC 60
Query: 61 LEENTSLCQNCDWNXXXXXXXXXXXKRQTINCYSGCPSSAELSRIWSFSMDIPTVAA 117
+ EN SLCQ C W + Q++N YS CPS ++ +IWS +++ P+V +
Sbjct: 61 MNENVSLCQGCQW--TASNCTGLGHRLQSLNPYSDCPSPSDFGKIWSSTLE-PSVTS 114
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Query: 300 AISNISLSFSGLTGESSAGYFQDCGVSSMILMGEPPWHXXXXXXXXXXXXRDNALTXXXX 359
+ N+SLS S LTGES+A +QDCG+S L+G+ PW RD A
Sbjct: 227 VVPNMSLSMSNLTGESNATDYQDCGISPGFLIGDSPWE-SNVEVSFNPKLRDEAKKRYKQ 285
Query: 360 XXXXXXXXXXXXYXXXXXXXXXXXXXXXXFVKAGEAYDYDP 400
Y FVK+GE ++YDP
Sbjct: 286 KKSKRMFGKQIRYASRKARADTRKRVKGRFVKSGETFEYDP 326
>AT2G33500.1 | chr2:14188159-14190046 REVERSE LENGTH=403
Length = 402
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 68/106 (64%)
Query: 5 CDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCVGQPAAVRCLEEN 64
C+FC E+ ++++CR+D A LCL CD++VHSAN LSR+H R+ +CD C +P +VRC +N
Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDN 71
Query: 65 TSLCQNCDWNXXXXXXXXXXXKRQTINCYSGCPSSAELSRIWSFSM 110
LCQ CDW+ +R + +SGCPS EL+ +W +
Sbjct: 72 LVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAAVWGIDL 117
>AT1G68190.1 | chr1:25559384-25561004 FORWARD LENGTH=357
Length = 356
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 131/306 (42%), Gaps = 52/306 (16%)
Query: 1 MDALCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCVGQPAAVRC 60
M+ +C+FC+ R++VYC +D A+LCL+CD VHSAN+LS RH RT+LCD C QP VRC
Sbjct: 10 MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKNQPCVVRC 69
Query: 61 LEENTSLCQNCDWNXXXXXXXXXXXKRQTINCYSGCPSSAELSRIW-------------- 106
+ LC C N +R+ + CY+GCP + + + +W
Sbjct: 70 FDHKMFLCHGC--NDKFHGGGSSEHRRRDLRCYTGCPPAKDFAVMWGFRVMDDDDDVSLE 127
Query: 107 -SFSMDIPTVAAEPN--CEEGINMMSINDNDVNNHCGAPEDG----RLLDIASTALMSDL 159
SF M P V E E+ + + + + N E G L + DL
Sbjct: 128 QSFRMVKPKVQREGGFILEQILELEKVQLREENGSSSLTERGDPSPLELPKKPEEQLIDL 187
Query: 160 PTGDK-----FKPLIGSSS-GDGMNLL--PLNSD-----QPAEPVSTTPKAPCVTDKDMF 206
P K F L SS+ GD P N + Q + + C D
Sbjct: 188 PQTGKELVVDFSHLSSSSTLGDSFWECKSPYNKNNQLWHQNIQDIGVCEDTICSDD---- 243
Query: 207 NDGSVYGDFCVDDADLTFENYEELFGTS---HVQTEQLFDDAGIDSYFEMKDVPADESNE 263
DF + D DLTF N+EE FG + +F + +D EMK + +N
Sbjct: 244 -------DFQIPDIDLTFRNFEEQFGADPEPIADSNNVFFVSSLDKSHEMKTFSSSFNNP 296
Query: 264 --QPKP 267
PKP
Sbjct: 297 IFAPKP 302
>AT1G28050.1 | chr1:9775768-9777657 REVERSE LENGTH=434
Length = 433
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 68/107 (63%)
Query: 5 CDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCVGQPAAVRCLEEN 64
CDFC E+ ++++CR+D A LCL CD+ VH+AN LSR+H R+ +CD C +P +VRC +N
Sbjct: 9 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDN 68
Query: 65 TSLCQNCDWNXXXXXXXXXXXKRQTINCYSGCPSSAELSRIWSFSMD 111
LCQ CDW+ R + +SGCPS+ EL+ +W ++
Sbjct: 69 LILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSALELAALWGLDLE 115
>AT2G47890.1 | chr2:19608245-19609476 FORWARD LENGTH=333
Length = 332
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 2 DALCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCVGQPAAVRCL 61
D LCD+C ++VYC++D+A LCL+CD+ VH AN L +H R+LLCD C P+++ C
Sbjct: 10 DRLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCE 69
Query: 62 EENTSLCQNCDWNXXXXXXXXXXXKRQTINCYSGCPSSAELSRI 105
E + LCQNCDW R+ ++GCPS EL I
Sbjct: 70 TERSVLCQNCDWQHHTASSSLHS--RRPFEGFTGCPSVPELLAI 111
>AT5G24930.1 | chr5:8589325-8590949 FORWARD LENGTH=407
Length = 406
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 43/69 (62%)
Query: 4 LCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCVGQPAAVRCLEE 63
LCD C+ + +YCR DAA LCLSCD VH+AN L+ RH R +C+ C PA V C +
Sbjct: 49 LCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKAD 108
Query: 64 NTSLCQNCD 72
+LC CD
Sbjct: 109 AAALCVTCD 117
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 33/41 (80%)
Query: 4 LCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTR 44
+C+ C + + V C++DAA+LC++CDR++HSAN L+RRH R
Sbjct: 92 MCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHER 132
>AT5G15840.1 | chr5:5171343-5172697 REVERSE LENGTH=374
Length = 373
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 42/68 (61%)
Query: 5 CDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCVGQPAAVRCLEEN 64
CD CR VYC +D+A LC+SCD VHSAN ++ RH R +C+ C PAA C ++
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEADD 79
Query: 65 TSLCQNCD 72
SLC CD
Sbjct: 80 ASLCTACD 87
>AT5G15850.1 | chr5:5176297-5177473 REVERSE LENGTH=356
Length = 355
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 40/68 (58%)
Query: 5 CDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCVGQPAAVRCLEEN 64
CD CR VYCR+D+A LC SCD VH+AN L+ RH R +C C PAA C +
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADA 71
Query: 65 TSLCQNCD 72
SLC CD
Sbjct: 72 ASLCTTCD 79
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 4 LCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRT 45
+C C + +C++DAASLC +CD +HSAN L+RRH R
Sbjct: 54 VCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRV 95
>AT2G24790.1 | chr2:10566959-10567946 FORWARD LENGTH=295
Length = 294
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%)
Query: 4 LCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCVGQPAAVRCLEE 63
LCD C+ + ++CR+DAA LC CD +H+AN L+ RH R LC+ C PA V C +
Sbjct: 7 LCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKAD 66
Query: 64 NTSLCQNCD 72
+LC CD
Sbjct: 67 AAALCVTCD 75
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 33/42 (78%)
Query: 4 LCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRT 45
LC+ C + + V C++DAA+LC++CDR++HSAN LSRRH R
Sbjct: 50 LCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERV 91
>AT3G02380.1 | chr3:487438-488624 REVERSE LENGTH=348
Length = 347
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 39/68 (57%)
Query: 5 CDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCVGQPAAVRCLEEN 64
CD CR VYC +D+A LC +CD VH+AN ++ RH R +C C PAA C +
Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADA 75
Query: 65 TSLCQNCD 72
SLC CD
Sbjct: 76 ASLCTACD 83
>AT1G75540.1 | chr1:28366059-28367398 FORWARD LENGTH=332
Length = 331
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 1 MDALCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTR------------TLLC 48
M CD C ++ + V+C +D ASLC CD VH AN L+ +H R + LC
Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60
Query: 49 DRCVGQPAAVRCLEENTSLCQNCD 72
D C + A + C ++ LC++CD
Sbjct: 61 DICQDKKALLFCQQDRAILCKDCD 84
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 33/44 (75%)
Query: 4 LCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLL 47
LCD C++++++++C+ D A LC CD ++H+AN +++H R LL
Sbjct: 59 LCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLL 102
>AT5G57660.1 | chr5:23355573-23356729 FORWARD LENGTH=356
Length = 355
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 5 CDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCVGQPAAVRCLEEN 64
CD C+ + V+CR D+A LC++CD +HS RH R +C+ C PAAV C +
Sbjct: 22 CDACKSVTAAVFCRVDSAFLCIACDTRIHSFT----RHERVWVCEVCEQAPAAVTCKADA 77
Query: 65 TSLCQNCD 72
+LC +CD
Sbjct: 78 AALCVSCD 85
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 4 LCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRT 45
+C+ C + + V C++DAA+LC+SCD ++HSAN L+ RH R
Sbjct: 60 VCEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERV 101
>AT2G21320.1 | chr2:9126502-9127652 FORWARD LENGTH=173
Length = 172
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 1 MDALCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLL--------CDRCV 52
M LCD C ++V+C +D A+LC SCD VH N L+ RH R L CD C
Sbjct: 1 MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE 60
Query: 53 GQPAAVRCLEENTSLCQNCDW 73
PA C + +SLC CD
Sbjct: 61 NAPAFFYCEIDGSSLCLQCDM 81
>AT2G31380.1 | chr2:13382150-13383302 FORWARD LENGTH=239
Length = 238
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 1 MDALCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLL---------CDRC 51
M CD C + + + C +D A+LC CD VH+AN L+ +H R L CD C
Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60
Query: 52 VGQPAAVRCLEENTSLCQNCD 72
+ + A + C+E+ LC++CD
Sbjct: 61 LEKAAFIFCVEDRALLCRDCD 81
>AT1G06040.1 | chr1:1828662-1829659 REVERSE LENGTH=249
Length = 248
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 1 MDALCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLL---------CDRC 51
M CD C + + V C +D A+LC CD +H+AN L+ +H R L CD C
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60
Query: 52 VGQPAAVRCLEENTSLCQNCD 72
+ A + C+E+ LC++CD
Sbjct: 61 QEKAAFIFCVEDRALLCRDCD 81
>AT4G15248.1 | chr4:8708881-8709234 FORWARD LENGTH=118
Length = 117
Score = 57.4 bits (137), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 5 CDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCVGQPAAVRCL 61
C+ C E + VYC +DAA LC CDR VHSAN L+RRH R ++C C + RCL
Sbjct: 32 CELCGEN-ATVYCEADAAFLCRKCDRWVHSANFLARRHLRRVICTTC--RKLTRRCL 85
>AT4G39070.1 | chr4:18205061-18206421 REVERSE LENGTH=243
Length = 242
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 1 MDALCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTR----------TLLCDR 50
M C C ++ + V+C +D A+LC CDR+VH AN L+ +H R LCD
Sbjct: 1 MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60
Query: 51 CVGQPAAVRCLEENTSLCQNCD 72
C + A + C E+ LC+ CD
Sbjct: 61 CGERRALLFCQEDRAILCRECD 82
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 4 LCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLL 47
LCD C E+R++++C+ D A LC CD +H AN +++H R LL
Sbjct: 57 LCDICGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLL 100
>AT1G78600.2 | chr1:29567370-29568662 FORWARD LENGTH=320
Length = 319
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 1 MDALCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLL---------CDRC 51
M C+ C + V C +D A+LC +CD +H+AN L+ +H R L CD C
Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60
Query: 52 VGQPAAVRCLEENTSLCQNCD 72
CL++ LC+ CD
Sbjct: 61 QEASGFFFCLQDRALLCRKCD 81
>AT1G60250.1 | chr1:22217077-22217832 REVERSE LENGTH=252
Length = 251
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 1 MDALCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCVGQPAAVRC 60
M +C CR ++++C ++A + CL+CD N+ N + H R LCD C P+ + C
Sbjct: 1 MAQVCHTCRHVTAVIHCVTEALNFCLTCD-NLRHHNNIHAEHVRYQLCDNCSMYPSILFC 59
Query: 61 LEENTSLCQNC 71
E+ LCQ+C
Sbjct: 60 YEDGMVLCQSC 70
>AT4G27310.1 | chr4:13675853-13676616 FORWARD LENGTH=224
Length = 223
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 1 MDALCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRC 51
M CD C M YC SD ASLC CD VH AN L +HTR LLC C
Sbjct: 1 MGKKCDLCNGVARM-YCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSAC 50
>AT1G25440.1 | chr1:8933939-8935284 REVERSE LENGTH=418
Length = 417
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 5 CDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCVGQPAAVR 59
CD C ++R+ YC +D A LC SCD VHSAN L+RRH R L PA V+
Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRL---KTASPAVVK 68
>AT1G68520.1 | chr1:25709331-25710749 REVERSE LENGTH=407
Length = 406
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 5 CDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCVGQ 54
CD C ++R+ YC +D A LC +CD +VHSAN L+RRH R L G+
Sbjct: 17 CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSASAGK 66
>AT4G10240.1 | chr4:6368967-6369526 REVERSE LENGTH=163
Length = 162
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 38/87 (43%), Gaps = 15/87 (17%)
Query: 1 MDALCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTL-------------- 46
M C+ C + + V C SD A LC CD VH AN L +RH R
Sbjct: 1 MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGA 60
Query: 47 -LCDRCVGQPAAVRCLEENTSLCQNCD 72
LCD C + CLE+ LC +CD
Sbjct: 61 PLCDICQERKGYFFCLEDRAMLCNDCD 87
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.131 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,220,922
Number of extensions: 345367
Number of successful extensions: 1014
Number of sequences better than 1.0e-05: 30
Number of HSP's gapped: 964
Number of HSP's successfully gapped: 39
Length of query: 407
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 306
Effective length of database: 8,337,553
Effective search space: 2551291218
Effective search space used: 2551291218
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 113 (48.1 bits)