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Os02g0722700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12 (0.0209) R2 : 0.557
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.24 (0.0529) R2dC : 0.538 R2C : 0.538
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.172 (0.044) R2dN8 : 0.0191 R2N8 : 0.0193
σ : 0.394
deviance : 70.95
__
_____
C
peak time of C : 3.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
50.75 0.335 12.1 -1.2 1.23 0.37 0.791 -1.44 -0.137 3.59 21.34 3470 -- --
53.32 0.34 12.1 -1.11 1.23 0.765 0.764 -- -0.0962 3.56 19.19 10796 -- --
52.58 0.338 12.1 -1.22 1.24 0.367 -- -1.43 -0.145 3.63 21.5 3348 -- --
53.66 0.341 12.1 -1.22 1.24 0.838 -- -- -0.102 3.56 17.9 22204 -- --
135.38 0.542 12.1 -1.34 -- 0.615 -- -1.72 -0.182 -- 23.8 4125 -- --
60.91 0.366 12 -0.551 1.25 -- 0.739 -- 0.113 3.55 -- -- -- --
62.58 0.37 12 -0.564 1.25 -- -- -- 0.109 3.6 -- -- -- --
138.74 0.549 12.1 -0.753 -- 0.523 -- -- -0.0696 -- 23.6 4048 -- --
68.4 0.385 12 -- 1.29 -0.255 -- -- 0.235 3.52 22.1 47194 -- --
150.15 0.573 12 -0.511 -- -- -- -- 0.142 -- -- -- -- --
70.95 0.394 12 -- 1.24 -- -- -- 0.172 3.6 -- -- -- --
132.66 0.538 12 -- -- -0.531 -- -- 0.272 -- 27.56 47520 -- --
157.04 0.585 12 -- -- -- -- -- 0.199 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 44.05 temperature 10.0 270 > th dose dependent rect. 2 18
19 46.19 temperature 10.0 270 > th dose dependent rect. 21 4
26 46.48 radiation 30.0 10 < th dose dependent rect. 4 18
32 46.67 radiation 20.0 90 < th dose independent rect. 3 19
37 46.91 radiation 40.0 14400 < th dose dependent rect. 23 6
40 46.95 radiation 10.0 270 < th dose independent rect. 1 18
45 47.09 radiation 20.0 10 < th dose independent rect. 4 18
47 47.14 temperature 10.0 10 > th dose dependent rect. 22 6
56 47.26 radiation 30.0 90 < th dose dependent rect. 16 17
57 47.27 temperature 15.0 270 > th dose independent rect. 1 20
62 47.30 temperature 15.0 270 > th dose independent rect. 2 17
64 47.35 radiation 30.0 270 < th dose independent rect. 1 8
74 47.46 wind 9.0 270 < th dose independent rect. 6 9
77 47.49 temperature 20.0 720 > th dose dependent rect. 1 10
81 47.54 radiation 40.0 270 < th dose independent rect. 15 15
87 47.59 temperature 10.0 270 > th dose dependent rect. 1 8
88 47.59 radiation 40.0 270 < th dose dependent rect. 1 8
91 47.60 radiation 40.0 270 < th dose independent rect. 1 18
98 47.62 temperature 10.0 720 > th dose dependent rect. 1 12
99 47.64 temperature 10.0 270 > th dose independent rect. 6 9
100 47.64 atmosphere 1015.0 270 < th dose independent rect. 6 9
101 47.64 temperature 10.0 270 > th dose independent rect. 15 15
115 47.73 precipitation 0.1 270 < th dose independent rect. 21 4
117 47.73 precipitation 0.1 270 < th dose dependent rect. 21 4
119 47.76 radiation 40.0 14400 < th dose dependent rect. 21 8
121 47.77 wind 9.0 270 < th dose independent rect. 21 4
122 47.77 temperature 10.0 270 > th dose independent rect. 21 4
123 47.77 temperature 30.0 270 < th dose independent rect. 21 4
124 47.77 humidity 50.0 270 > th dose independent rect. 21 4
127 47.77 atmosphere 995.0 270 > th dose independent rect. 21 4
128 47.77 radiation 1.0 270 < th dose independent rect. 21 4
134 47.77 radiation 1.0 270 < th dose dependent rect. 21 4
143 47.79 humidity 70.0 270 > th dose independent rect. 19 7
144 47.79 radiation 20.0 90 < th dose independent rect. 17 16
148 47.80 radiation 40.0 270 < th dose dependent rect. 1 18
149 47.81 precipitation 0.1 270 < th dose independent rect. 6 9
150 47.81 precipitation 0.1 270 < th dose dependent rect. 6 9
164 47.86 wind 9.0 270 < th dose independent rect. 19 7
165 47.86 temperature 10.0 270 > th dose independent rect. 19 7
166 47.86 temperature 30.0 270 < th dose independent rect. 19 7
167 47.86 humidity 50.0 270 > th dose independent rect. 19 7
169 47.86 atmosphere 995.0 270 > th dose independent rect. 19 7
170 47.86 radiation 1.0 270 < th dose independent rect. 19 7
178 47.86 atmosphere 1015.0 270 < th dose independent rect. 2 17
179 47.86 radiation 1.0 270 < th dose dependent rect. 19 7
187 47.87 precipitation 0.1 270 < th dose independent rect. 2 17
188 47.87 precipitation 0.1 270 < th dose dependent rect. 2 17
191 47.88 wind 9.0 270 < th dose independent rect. 15 15
192 47.89 precipitation 0.1 270 < th dose independent rect. 19 7
194 47.89 precipitation 0.1 270 < th dose dependent rect. 19 7
198 47.92 precipitation 0.1 270 < th dose independent rect. 1 20
199 47.92 precipitation 0.1 270 < th dose dependent rect. 1 20
205 47.97 atmosphere 1015.0 270 < th dose independent rect. 21 4
206 47.97 atmosphere 995.0 270 > th dose independent rect. 2 17
211 47.98 radiation 20.0 90 < th dose dependent rect. 3 16
214 47.99 radiation 30.0 10 < th dose dependent rect. 4 16
263 48.08 radiation 30.0 10 < th dose dependent rect. 16 17
265 48.09 atmosphere 995.0 270 > th dose independent rect. 1 20
270 48.10 radiation 40.0 90 < th dose dependent rect. 3 8
275 48.11 temperature 20.0 720 > th dose dependent sin 7 NA
286 48.13 wind 9.0 270 < th dose independent rect. 9 16
311 48.21 atmosphere 995.0 270 > th dose independent rect. 15 15
313 48.21 wind 9.0 270 < th dose independent rect. 1 20
327 48.22 atmosphere 995.0 270 > th dose independent rect. 6 9
329 48.22 temperature 20.0 30 > th dose independent rect. 4 18
339 48.23 radiation 40.0 90 < th dose independent rect. 3 8
341 48.24 wind 9.0 270 < th dose independent rect. 2 17
350 48.27 wind 9.0 270 < th dose dependent rect. 21 4
359 48.29 precipitation 0.1 270 < th dose independent rect. 1 8
361 48.29 precipitation 0.1 270 < th dose dependent rect. 1 8
365 48.30 precipitation 0.1 270 < th dose independent rect. 15 15
367 48.30 precipitation 0.1 270 < th dose dependent rect. 15 15
370 48.32 humidity 60.0 270 > th dose independent rect. 1 8
382 48.36 wind 9.0 270 < th dose independent rect. 1 8
383 48.36 temperature 10.0 270 > th dose independent rect. 1 8
386 48.36 atmosphere 995.0 270 > th dose independent rect. 1 8
387 48.36 atmosphere 1015.0 270 < th dose independent rect. 1 8
388 48.36 temperature 10.0 270 > th dose independent rect. 9 16
396 48.39 wind 1.0 270 > th dose independent rect. 21 4
409 48.44 atmosphere 1015.0 270 < th dose independent rect. 19 7
421 48.47 radiation 30.0 10 < th dose dependent rect. 16 19
424 48.49 radiation 20.0 10 < th dose independent rect. 4 16
434 48.53 wind 1.0 270 > th dose independent rect. 20 6
435 48.53 temperature 15.0 270 > th dose independent rect. 1 10
440 48.54 temperature 30.0 270 < th dose independent rect. 1 8
472 48.64 radiation 20.0 10 < th dose independent rect. 17 16
479 48.66 atmosphere 995.0 10 > th dose independent rect. 4 18
494 48.72 precipitation 0.1 270 < th dose independent rect. 9 16
497 48.72 precipitation 0.1 270 < th dose dependent rect. 9 16
511 48.75 radiation 40.0 10 < th dose dependent rect. 4 7
513 48.76 humidity 50.0 270 > th dose dependent rect. 21 4
520 48.77 humidity 50.0 10 > th dose independent rect. 4 18
610 48.89 humidity 60.0 270 > th dose independent rect. 1 10
612 48.90 wind 7.0 10 < th dose independent rect. 22 6
613 48.90 temperature 20.0 270 > th dose independent rect. 14 6
620 48.92 radiation 1.0 270 > th dose independent rect. 6 9
623 48.92 radiation 20.0 10 < th dose dependent rect. 3 21
625 48.93 temperature 10.0 10 > th dose independent rect. 22 6
626 48.93 temperature 30.0 10 < th dose independent rect. 22 6
627 48.93 humidity 50.0 10 > th dose independent rect. 22 6
630 48.93 atmosphere 995.0 10 > th dose independent rect. 22 6
631 48.93 radiation 1.0 10 < th dose independent rect. 22 6
637 48.93 temperature 10.0 10 > th dose independent rect. 4 18
640 48.93 atmosphere 1015.0 10 < th dose independent rect. 4 18
642 48.93 radiation 1.0 10 < th dose dependent rect. 22 6
655 48.96 radiation 20.0 90 < th dose independent rect. 3 6
674 49.00 radiation 20.0 10 < th dose independent rect. 4 6
733 49.04 atmosphere 1015.0 10 < th dose independent rect. 22 6
742 49.06 precipitation 0.1 10 < th dose independent rect. 4 18
746 49.06 precipitation 0.1 10 < th dose dependent rect. 4 18
759 49.10 temperature 20.0 720 > th dose independent rect. 1 12
773 49.12 radiation 20.0 10 < th dose independent rect. 4 8
780 49.13 radiation 40.0 90 < th dose dependent rect. 3 6
791 49.15 wind 9.0 270 < th dose independent rect. 21 17
863 49.21 humidity 50.0 270 > th dose dependent rect. 1 8
864 49.21 humidity 50.0 90 > th dose dependent rect. 3 8
900 49.27 wind 9.0 30 < th dose independent rect. 4 18
903 49.27 humidity 50.0 270 > th dose dependent rect. 19 7
935 49.33 temperature 10.0 270 > th dose independent rect. 21 17
936 49.33 atmosphere 995.0 270 > th dose independent rect. 21 17
947 49.35 wind 1.0 270 > th dose independent rect. 14 7
951 49.35 temperature 15.0 720 > th dose dependent rect. 2 3
956 49.36 radiation 10.0 270 < th dose independent rect. 1 14
979 49.41 temperature 20.0 270 > th dose independent rect. 15 4
991 49.42 radiation 10.0 1440 < th dose dependent rect. 23 6