Os02g0721700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0721700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 124.17 | 0.524 | 11.3 | -1.33 | 0.743 | -0.562 | 0.364 | 2.11 | -0.641 | 7.85 | 50 | 4 | -- | -- |
| 134.32 | 0.544 | 11.3 | -1.29 | 0.756 | -0.51 | 0.00613 | -- | -0.64 | 7.81 | 50 | 4 | -- | -- |
| 124.51 | 0.524 | 11.3 | -1.32 | 0.744 | -0.572 | -- | 2.02 | -0.644 | 7.76 | 50 | 4 | -- | -- |
| 134.32 | 0.543 | 11.3 | -1.29 | 0.756 | -0.509 | -- | -- | -0.639 | 7.81 | 50 | 5 | -- | -- |
| 154.25 | 0.582 | 11.3 | -1.32 | -- | -0.521 | -- | 2.13 | -0.633 | -- | 50 | 4 | -- | -- |
| 137.9 | 0.551 | 11.3 | -1.27 | 0.768 | -- | -0.348 | -- | -0.626 | 9.42 | -- | -- | -- | -- |
| 138.33 | 0.551 | 11.3 | -1.29 | 0.772 | -- | -- | -- | -0.626 | 9.34 | -- | -- | -- | -- |
| 165.22 | 0.601 | 11.3 | -1.28 | -- | -0.465 | -- | -- | -0.628 | -- | 50 | 5 | -- | -- |
| 177.95 | 0.625 | 11.3 | -- | 0.747 | -0.509 | -- | -- | -0.496 | 7.93 | 50 | 5 | -- | -- |
| 173.09 | 0.615 | 11.3 | -1.29 | -- | -- | -- | -- | -0.623 | -- | -- | -- | -- | -- |
| 181.96 | 0.631 | 11.2 | -- | 0.773 | -- | -- | -- | -0.483 | 9.46 | -- | -- | -- | -- |
| 208.23 | 0.674 | 11.3 | -- | -- | -0.408 | -- | -- | -0.5 | -- | 62.01 | 4 | -- | -- |
| 217.03 | 0.688 | 11.3 | -- | -- | -- | -- | -- | -0.48 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.34 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 17 | 115.34 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 33 | 116.43 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 19 | 19 |
| 35 | 117.21 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 21 | 17 |
| 36 | 117.30 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 19 | 22 |
| 38 | 117.49 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 39 | 117.51 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 41 | 117.60 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 42 | 117.61 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 50 | 118.14 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 52 | 118.27 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 7 | 7 |
| 58 | 118.59 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 95 | 119.37 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 15 | 9 |
| 97 | 119.38 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 15 |
| 101 | 119.45 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 115 | 119.68 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 16 | 13 |
| 120 | 119.73 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 21 | 3 |
| 121 | 119.75 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 16 | 11 |
| 127 | 119.79 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 16 | 9 |
| 129 | 119.80 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 16 | 5 |
| 130 | 119.80 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 16 | 7 |
| 132 | 119.81 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 10 |
| 148 | 119.96 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 20 | 12 |
| 153 | 119.98 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 156 | 120.00 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 157 | 120.01 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 164 | 120.04 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 11 |
| 184 | 120.11 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 16 | 13 |
| 190 | 120.13 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 11 |
| 193 | 120.15 | temperature | 20.0 | 14400 | < th | dose dependent | sin | 18 | NA |
| 207 | 120.24 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 220 | 120.28 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 221 | 120.29 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 22 | 3 |
| 222 | 120.29 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 223 | 120.29 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 20 | 6 |
| 226 | 120.29 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 22 | 3 |
| 235 | 120.30 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 16 | 9 |
| 255 | 120.33 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 16 | 5 |
| 277 | 120.35 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 285 | 120.35 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 297 | 120.37 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 338 | 120.42 | temperature | 25.0 | 270 | > th | dose independent | rect. | 18 | 20 |
| 375 | 120.46 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 387 | 120.46 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 489 | 120.66 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 11 |
| 494 | 120.69 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 500 | 120.71 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 528 | 120.71 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 563 | 120.73 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 592 | 120.79 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 680 | 121.04 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 711 | 121.17 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 13 | 16 |
| 722 | 121.21 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 19 | 22 |
| 732 | 121.24 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 767 | 121.35 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 768 | 121.35 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 778 | 121.40 | temperature | 30.0 | 270 | < th | dose dependent | sin | 4 | NA |
| 813 | 121.51 | temperature | 15.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 822 | 121.52 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 902 | 121.75 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 906 | 121.76 | temperature | 25.0 | 270 | > th | dose independent | sin | 5 | NA |
| 907 | 121.76 | temperature | 20.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 931 | 121.81 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 934 | 121.81 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 947 | 121.83 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 13 | 16 |
| 957 | 121.86 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 962 | 121.87 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 17 | 12 |
| 964 | 121.87 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 16 | 15 |