BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0721700 Os02g0721700|AK061514
         (167 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G56170.1  | chr5:22736072-22737108 FORWARD LENGTH=169          161   1e-40
AT4G28280.2  | chr4:14010785-14011487 FORWARD LENGTH=161          150   3e-37
AT2G20700.1  | chr2:8925003-8925714 REVERSE LENGTH=164            149   5e-37
AT4G26466.1  | chr4:13367645-13368629 REVERSE LENGTH=166          141   2e-34

>AT5G56170.1 | chr5:22736072-22737108 FORWARD LENGTH=169
          Length = 168

 Score =  161 bits (408), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 74/107 (69%), Positives = 86/107 (80%)

Query: 29  DSVFLGSVGSTGRSLLQAKKNCPVNFEFQNYTIITSKCKGPRFPAKQCCDAFKEFACPFN 88
           D VF       GR+LLQ KK CPVNFEF NYTIITSKCKGP++P K+CC AFK+FACP+ 
Sbjct: 28  DGVFESQSLVLGRNLLQTKKTCPVNFEFMNYTIITSKCKGPKYPPKECCGAFKDFACPYT 87

Query: 89  EYINDESNDCASTMFSYINLYGKYPPGLFANECREGKLGLSCEGVSQ 135
           + +ND S+DCA+TMFSYINLYGKYPPGLFAN+C+EGK GL C   SQ
Sbjct: 88  DQLNDLSSDCATTMFSYINLYGKYPPGLFANQCKEGKEGLECPAGSQ 134



>AT4G28280.2 | chr4:14010785-14011487 FORWARD LENGTH=161
          Length = 160

 Score =  150 bits (379), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 68/97 (70%), Positives = 78/97 (80%)

Query: 38  STGRSLLQAKKNCPVNFEFQNYTIITSKCKGPRFPAKQCCDAFKEFACPFNEYINDESND 97
           ST R+LLQAK  C  +F  +NYTIITSKCKGP +PAK CC AFK+FACPF E +NDE  D
Sbjct: 36  STSRALLQAKATCKEDFAAKNYTIITSKCKGPNYPAKVCCSAFKDFACPFAEVLNDEKTD 95

Query: 98  CASTMFSYINLYGKYPPGLFANECREGKLGLSCEGVS 134
           CASTMFSYINLYG+YPPG+FAN C+EGK GL C  V+
Sbjct: 96  CASTMFSYINLYGRYPPGIFANMCKEGKEGLDCTDVT 132



>AT2G20700.1 | chr2:8925003-8925714 REVERSE LENGTH=164
          Length = 163

 Score =  149 bits (377), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 69/130 (53%), Positives = 85/130 (65%)

Query: 37  GSTGRSLLQAKKNCPVNFEFQNYTIITSKCKGPRFPAKQCCDAFKEFACPFNEYINDESN 96
            +T R+LLQ +  C  +F  +NYTIITS+CKGP +PA  CC AFK+FACPF E +NDE N
Sbjct: 31  AATSRALLQTRTTCKEDFANKNYTIITSRCKGPNYPANVCCSAFKDFACPFAEVLNDEKN 90

Query: 97  DCASTMFSYINLYGKYPPGLFANECREGKLGLSCEGVSQKDXXXXXXXXXXXXXXXXFIM 156
           DCASTMFSYINLYG+YPPG+FAN C+EGK GL C  V+Q                   ++
Sbjct: 91  DCASTMFSYINLYGRYPPGIFANMCKEGKEGLDCTDVTQSASATSDSIPRASTTASLAVL 150

Query: 157 LTFGLAALWF 166
            TF +  L F
Sbjct: 151 STFLVLCLLF 160



>AT4G26466.1 | chr4:13367645-13368629 REVERSE LENGTH=166
          Length = 165

 Score =  141 bits (355), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 63/102 (61%), Positives = 76/102 (74%)

Query: 29  DSVFLGSVGSTGRSLLQAKKNCPVNFEFQNYTIITSKCKGPRFPAKQCCDAFKEFACPFN 88
           D VF      +GR+L  AKK C VNFE+ +Y ++T +CKGP FPAK+CC AFKEFACP+ 
Sbjct: 25  DGVFESQTSVSGRNLRHAKKKCEVNFEYMDYKVLTKRCKGPAFPAKECCSAFKEFACPYV 84

Query: 89  EYINDESNDCASTMFSYINLYGKYPPGLFANECREGKLGLSC 130
             IND ++DCA TMFSY+N+YG YP GLFANECRE K GL C
Sbjct: 85  SQINDMNSDCAQTMFSYMNIYGNYPTGLFANECRERKDGLVC 126



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.324    0.139    0.449 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,945,242
Number of extensions: 111226
Number of successful extensions: 245
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 245
Number of HSP's successfully gapped: 4
Length of query: 167
Length of database: 11,106,569
Length adjustment: 91
Effective length of query: 76
Effective length of database: 8,611,713
Effective search space: 654490188
Effective search space used: 654490188
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 108 (46.2 bits)