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Os02g0707900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Universal stress protein (Usp) family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.51 (0.021) R2 : 0.721
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.72 (0.0501) R2dC : 0.723 R2C : 0.719
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0702 (0.0442) R2dN8 : 0.00199 R2N8 : -0.00136
σ : 0.396
deviance : 71.84
__
_____
C
peak time of C : 23.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
46.78 0.321 9.51 -0.621 1.13 -0.605 -0.277 0.152 -0.153 23.2 10.41 10 -- --
46.84 0.319 9.51 -0.611 1.12 -0.616 -0.405 -- -0.153 23.1 10.42 10 -- --
46.9 0.319 9.51 -0.617 1.13 -0.607 -- 0.342 -0.15 23.2 10.41 10 -- --
47.49 0.321 9.51 -0.608 1.14 -0.595 -- -- -0.151 23.2 10.07 9 -- --
70.38 0.391 9.43 -0.593 -- -1.35 -- 0.548 -0.0841 -- 8.327 10 -- --
59.87 0.363 9.52 -0.676 1.72 -- -0.28 -- -0.145 23.5 -- -- -- --
60.21 0.363 9.52 -0.664 1.73 -- -- -- -0.144 23.5 -- -- -- --
69.42 0.388 9.49 -0.747 -- -1.32 -- -- -0.146 -- 8.33 11 -- --
57.07 0.352 9.49 -- 1.07 -0.656 -- -- -0.098 23.1 10.18 8 -- --
247.33 0.735 9.48 -0.617 -- -- -- -- -0.125 -- -- -- -- --
71.84 0.396 9.51 -- 1.72 -- -- -- -0.0702 23.5 -- -- -- --
83.96 0.427 9.46 -- -- -1.32 -- -- -0.054 -- 8.327 10 -- --
257.38 0.749 9.47 -- -- -- -- -- -0.0567 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 35.28 radiation 30.0 270 < th dose dependent rect. 1 6
3 35.34 wind 7.0 270 < th dose independent rect. 1 6
5 35.39 precipitation 0.1 270 < th dose independent rect. 14 16
6 35.39 precipitation 0.1 270 < th dose dependent rect. 14 16
9 35.46 radiation 20.0 270 < th dose independent rect. 1 6
10 35.48 humidity 70.0 270 > th dose independent rect. 1 6
11 35.52 precipitation 0.1 270 < th dose independent rect. 1 6
12 35.52 precipitation 0.1 270 < th dose dependent rect. 1 6
13 35.54 atmosphere 995.0 270 > th dose independent rect. 18 8
16 35.56 temperature 10.0 270 > th dose independent rect. 1 6
18 35.56 temperature 30.0 270 < th dose independent rect. 1 6
19 35.56 humidity 50.0 270 > th dose independent rect. 1 6
21 35.56 atmosphere 995.0 270 > th dose independent rect. 1 6
22 35.56 atmosphere 1015.0 270 < th dose independent rect. 1 6
24 35.56 temperature 10.0 270 > th dose independent rect. 7 18
25 35.58 wind 9.0 270 < th dose independent rect. 2 16
26 35.65 radiation 10.0 270 < th dose dependent rect. 18 8
27 35.66 radiation 10.0 270 < th dose independent rect. 18 8
28 35.67 precipitation 0.1 270 < th dose independent rect. 2 16
30 35.67 precipitation 0.1 270 < th dose dependent rect. 2 16
33 35.69 temperature 10.0 270 > th dose independent rect. 18 8
34 35.69 humidity 50.0 270 > th dose independent rect. 18 8
38 35.69 temperature 10.0 270 > th dose independent rect. 2 16
39 35.69 atmosphere 1015.0 270 < th dose independent rect. 2 16
41 35.76 wind 9.0 270 < th dose independent rect. 18 8
47 35.97 wind 9.0 270 < th dose independent rect. 13 17
49 35.99 precipitation 0.1 270 < th dose independent rect. 6 7
50 35.99 precipitation 0.1 270 < th dose dependent rect. 6 7
52 36.03 temperature 10.0 270 > th dose independent rect. 6 7
53 36.03 atmosphere 995.0 270 > th dose independent rect. 6 7
54 36.03 atmosphere 1015.0 270 < th dose independent rect. 6 7
55 36.03 temperature 10.0 270 > th dose independent rect. 13 17
59 36.08 humidity 50.0 270 > th dose independent rect. 6 7
61 36.11 wind 9.0 270 < th dose independent rect. 7 18
74 36.15 humidity 50.0 270 > th dose dependent rect. 18 7
89 36.24 atmosphere 995.0 270 > th dose independent rect. 7 18
90 36.26 wind 9.0 270 < th dose independent rect. 6 7
110 36.49 temperature 30.0 270 < th dose independent rect. 18 8
118 36.65 radiation 40.0 270 < th dose independent rect. 14 16
121 36.70 precipitation 0.1 270 < th dose independent rect. 7 18
122 36.70 precipitation 0.1 270 < th dose dependent rect. 7 18
123 36.72 radiation 1.0 270 > th dose independent rect. 6 7
124 36.72 precipitation 0.1 270 < th dose independent rect. 18 8
125 36.72 precipitation 0.1 270 < th dose dependent rect. 18 8
138 37.02 wind 1.0 270 > th dose independent rect. 12 7
165 37.13 precipitation 0.1 270 < th dose independent rect. 12 8
166 37.13 precipitation 0.1 270 < th dose dependent rect. 12 8
204 37.33 wind 1.0 270 > th dose independent rect. 6 7
213 37.36 humidity 50.0 270 > th dose independent rect. 19 17
221 37.40 wind 9.0 270 < th dose dependent rect. 1 6
233 37.48 atmosphere 1015.0 270 < th dose independent rect. 7 18
234 37.49 wind 1.0 270 > th dose independent rect. 1 6
258 37.55 wind 9.0 270 < th dose independent rect. 12 7
270 37.59 temperature 10.0 270 > th dose independent rect. 12 7
272 37.59 atmosphere 1015.0 270 < th dose independent rect. 12 7
274 37.59 temperature 10.0 270 > th dose independent rect. 19 17
275 37.59 atmosphere 995.0 270 > th dose independent rect. 19 17
296 37.73 humidity 50.0 270 > th dose dependent rect. 1 6
301 37.75 temperature 10.0 270 > th dose dependent rect. 1 6
302 37.76 wind 9.0 270 < th dose independent rect. 19 17
306 37.78 wind 1.0 270 > th dose independent rect. 18 8
317 37.82 radiation 40.0 90 < th dose dependent rect. 3 6
319 37.84 wind 1.0 270 > th dose independent rect. 7 18
336 37.92 temperature 30.0 270 < th dose independent rect. 6 7
349 38.08 radiation 20.0 90 < th dose independent rect. 3 6
351 38.08 radiation 1.0 270 < th dose dependent rect. 11 14
358 38.12 atmosphere 995.0 270 > th dose independent rect. 2 16
368 38.17 precipitation 0.1 270 < th dose independent rect. 20 16
369 38.17 precipitation 0.1 270 < th dose dependent rect. 20 16
372 38.18 humidity 50.0 270 > th dose independent rect. 7 18
390 38.26 atmosphere 1015.0 270 < th dose independent rect. 18 7
435 38.40 radiation 1.0 270 < th dose independent rect. 11 14
441 38.41 atmosphere 995.0 270 > th dose independent rect. 13 17
457 38.44 wind 1.0 270 > th dose independent rect. 13 17
512 38.59 temperature 30.0 270 < th dose independent rect. 19 17
622 39.04 atmosphere 1015.0 270 < th dose independent rect. 19 17
746 39.36 radiation 20.0 10 < th dose dependent rect. 4 16
778 39.40 radiation 10.0 10 < th dose independent rect. 4 16
780 39.40 temperature 10.0 270 > th dose dependent rect. 19 6
781 39.40 radiation 40.0 10 < th dose dependent rect. 3 7
857 39.55 humidity 50.0 90 > th dose dependent rect. 3 6
858 39.55 wind 9.0 270 < th dose dependent rect. 18 7
902 39.71 wind 1.0 270 > th dose independent rect. 1 18
991 39.92 atmosphere 995.0 270 > th dose independent rect. 12 7