BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0707900 Os02g0707900|AK064357
(177 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G14680.1 | chr5:4731620-4733025 REVERSE LENGTH=176 283 3e-77
AT3G01520.1 | chr3:208506-209921 FORWARD LENGTH=176 273 5e-74
AT3G58450.1 | chr3:21622032-21623057 FORWARD LENGTH=205 84 5e-17
AT3G11930.3 | chr3:3776371-3777393 FORWARD LENGTH=227 83 8e-17
AT1G68300.1 | chr1:25598518-25599261 REVERSE LENGTH=161 80 7e-16
AT1G09740.1 | chr1:3154603-3155834 FORWARD LENGTH=172 76 1e-14
AT3G62550.1 | chr3:23136194-23137074 FORWARD LENGTH=163 74 3e-14
AT3G53990.1 | chr3:19989658-19991019 REVERSE LENGTH=161 58 2e-09
AT3G17020.1 | chr3:5802728-5804063 REVERSE LENGTH=164 55 2e-08
AT2G47710.1 | chr2:19555045-19555956 REVERSE LENGTH=163 54 4e-08
AT2G21620.2 | chr2:9248749-9249986 FORWARD LENGTH=194 51 3e-07
AT1G11360.1 | chr1:3822171-3822899 REVERSE LENGTH=243 49 2e-06
>AT5G14680.1 | chr5:4731620-4733025 REVERSE LENGTH=176
Length = 175
Score = 283 bits (724), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 128/173 (73%), Positives = 152/173 (87%)
Query: 5 SEPTRVMVAVNESSIKGYPHPSISCRAAFDWMLSKLVRSNAAGFHLLFLHVQVPDEDGFD 64
SEPTRVMVAVNES++KGYPH SIS + AF+W L K+VRSN +GF LL LHVQV DEDGFD
Sbjct: 3 SEPTRVMVAVNESTLKGYPHASISSKKAFEWTLKKIVRSNTSGFKLLLLHVQVQDEDGFD 62
Query: 65 DMDSIYASPPDFQRMKQRDKIRGLHLLEHFVNQCHQLEIKCEAWIKQGDPKEVICSEVKR 124
DMDSIYASP DF++M++R+K +GLHLLE FV +CH + + CEAWI++GDP E+IC EV+R
Sbjct: 63 DMDSIYASPDDFRQMRERNKAKGLHLLEFFVKKCHDIGVGCEAWIRKGDPTELICHEVRR 122
Query: 125 VQPDLLVVGSRGLGPFQRVFVGTVSEFCVKHADCPVITIKRKADEAPQDPVDD 177
V+PD LVVGSRGLGPFQ+VFVGTVSEFCVKHA+CPVITIKR A+E+PQDP DD
Sbjct: 123 VRPDFLVVGSRGLGPFQKVFVGTVSEFCVKHAECPVITIKRTAEESPQDPADD 175
>AT3G01520.1 | chr3:208506-209921 FORWARD LENGTH=176
Length = 175
Score = 273 bits (697), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 125/173 (72%), Positives = 147/173 (84%)
Query: 5 SEPTRVMVAVNESSIKGYPHPSISCRAAFDWMLSKLVRSNAAGFHLLFLHVQVPDEDGFD 64
SEPT+VMVAVN S+IK YP+PSISC+ AF+W L K+VRSN + F +L LHVQV DEDGFD
Sbjct: 3 SEPTKVMVAVNASTIKDYPNPSISCKRAFEWTLEKIVRSNTSDFKILLLHVQVVDEDGFD 62
Query: 65 DMDSIYASPPDFQRMKQRDKIRGLHLLEHFVNQCHQLEIKCEAWIKQGDPKEVICSEVKR 124
D+DSIYASP DF+ M+Q +K +GLHLLE FVN+CH++ + CEAWIK GDPK+VIC EVKR
Sbjct: 63 DVDSIYASPEDFRDMRQSNKAKGLHLLEFFVNKCHEIGVGCEAWIKTGDPKDVICQEVKR 122
Query: 125 VQPDLLVVGSRGLGPFQRVFVGTVSEFCVKHADCPVITIKRKADEAPQDPVDD 177
V+PD LVVGSRGLG FQ+VFVGTVS FCVKHA+CPV+TIKR ADE P DP DD
Sbjct: 123 VRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAECPVMTIKRNADETPSDPADD 175
>AT3G58450.1 | chr3:21622032-21623057 FORWARD LENGTH=205
Length = 204
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 22/167 (13%)
Query: 10 VMVAVNESSIKGYPHPSISCRAAFDWMLSKLV-------RSNAAGFHLLFLHVQVPDEDG 62
VMVA++ES + A +W + L + G L LHV P
Sbjct: 32 VMVAIDESK---------NSFDALEWAVDHLRVVISAEPETGQEGGLLTLLHVH-PTYLQ 81
Query: 63 F-----DDMDSIYASPPDFQRMKQRDKIRGLHLLEHFVNQCHQLEIKCEAWIKQGDPKEV 117
+ ++YA+ + M++ + +L + C +K E I +GDPKE+
Sbjct: 82 YIYPSGGTASAVYATDSVPEPMRKAREESTTNLFTRALEICRGKMVKTETMILEGDPKEM 141
Query: 118 ICSEVKRVQPDLLVVGSRGLGPFQRVFVGTVSEFCVKHADCPVITIK 164
IC V++ DLLVVGSRGLG +R F+G+VS++C +HA CP++ ++
Sbjct: 142 ICQAVEQTHVDLLVVGSRGLGMIKRAFLGSVSDYCAQHAKCPILIVR 188
>AT3G11930.3 | chr3:3776371-3777393 FORWARD LENGTH=227
Length = 226
Score = 82.8 bits (203), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 48/195 (24%)
Query: 9 RVMVAVNESSIKGYPHPSISCRAAFDWML---SKLVRSNAAG----FHLLFLHVQVPDED 61
R++VA++ES Y A W++ S L+ + AA L +HVQ P
Sbjct: 34 RMVVAIDESDSSFY---------ALQWVIDHFSNLLLTTAAAEAESGMLTVIHVQSPFNH 84
Query: 62 ------GFDDMDSIYASPPDFQRMKQRDKIRGLHLLEHFVNQCHQLEIKCEAWIKQGDPK 115
G ++YAS + +K+ + LL + C +I+ E + +G+ K
Sbjct: 85 FAAFPAGPGGATAVYASSSMIESVKKAQQETSAALLSRALQMCRAKQIRTETLVLEGEAK 144
Query: 116 EVICSEVKRVQPDLLVVGSRGLGP--------------------------FQRVFVGTVS 149
E+IC V+++ DLLVVGSRGLG F R F+G+VS
Sbjct: 145 EMICEAVEKMHVDLLVVGSRGLGKIKRYCIINNFFLYINLSAYYFVCFVRFGRAFLGSVS 204
Query: 150 EFCVKHADCPVITIK 164
++C HA+CP++ +K
Sbjct: 205 DYCAHHANCPILIVK 219
>AT1G68300.1 | chr1:25598518-25599261 REVERSE LENGTH=161
Length = 160
Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 9 RVMVAVNESSIKGYPHPSISCRAAFDWMLSKLVRSNAAGFHLLFLHVQVPDEDGFDDMDS 68
+VMVA++ES + A W L L S A +LF P D S
Sbjct: 11 QVMVAIDESECS---------KRALQWTLVYLKDSLADSDIILF--TAQPHLDLSCVYAS 59
Query: 69 IYASPPD--FQRMKQRDKIRGLHLLEHFVNQCHQLEIKCEAWIKQGDPKEVICSEVKRVQ 126
Y + P +++ K GL+ L+ C + + ++ G+PKE IC +++
Sbjct: 60 SYGAAPIELINSLQESHKNAGLNRLDEGTKICAETGVTPRKVLEFGNPKEAICEAAEKLG 119
Query: 127 PDLLVVGSRGLGPFQRVFVGTVSEFCVKHADCPVITIKRKA 167
D+LVVGS G G QR F+G+VS +CV +A CPV+ ++ KA
Sbjct: 120 VDMLVVGSHGKGALQRTFLGSVSNYCVNNAKCPVLVVRTKA 160
>AT1G09740.1 | chr1:3154603-3155834 FORWARD LENGTH=172
Length = 171
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%)
Query: 90 LLEHFVNQCHQLEIKCEAWIKQGDPKEVICSEVKRVQPDLLVVGSRGLGPFQRVFVGTVS 149
+LEH C + + + + GDPK IC V+ + DLLV+GSR G +R+F+G+VS
Sbjct: 90 ILEHASQICAEKSVNVKTQVVIGDPKYKICEAVENLHADLLVMGSRAYGRIKRMFLGSVS 149
Query: 150 EFCVKHADCPVITIKRKADEA 170
+C HA CPV+ IK K D +
Sbjct: 150 NYCTNHAHCPVVIIKPKEDSS 170
>AT3G62550.1 | chr3:23136194-23137074 FORWARD LENGTH=163
Length = 162
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 21/172 (12%)
Query: 5 SEPTRVMVAVNESSIKGYPHPSISCRAAFDWMLSKLVRSNAAGFHLLFLHVQVP------ 58
++ +++VAV+ES A W L L + L+ L+V+ P
Sbjct: 4 TKERKIVVAVDESE---------ESMEALSWSLDNLF-PYGSNNTLILLYVKPPLPVYSS 53
Query: 59 -DEDGFDDMDSIYASPPDFQRMKQRDKIRGLHLLEHFVNQCHQLEIKCEAWIKQGDPKEV 117
D GF + P + + + + + V Q ++ +I E + +GD KEV
Sbjct: 54 LDAAGF----IVTGDPVAALKKYEYELVESVMARSRTVYQDYESDINIERRVGRGDAKEV 109
Query: 118 ICSEVKRVQPDLLVVGSRGLGPFQRVFVGTVSEFCVKHADCPVITIKRKADE 169
IC+ V++++ D+LV+G+ G F+R +G+VSE+C K CPV+ +K++A +
Sbjct: 110 ICNAVQKLRVDMLVMGTHDYGFFKRALLGSVSEYCAKRVKCPVVIVKKQAQD 161
>AT3G53990.1 | chr3:19989658-19991019 REVERSE LENGTH=161
Length = 160
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 91 LEHFVNQCHQLEIKCEAWIKQGDPKEVICSEVKRVQPDLLVVGSRGLGPFQRVFVGTVSE 150
L+ Q E+ + GD +E + VK ++ D +V+GSRGL QR+ +G+VS
Sbjct: 84 LDMLDTGSRQKEVHVVTKLYWGDAREKLVDAVKDLKLDSIVMGSRGLSALQRIIMGSVSS 143
Query: 151 FCVKHADCPVITIK 164
F ++HA CPV +K
Sbjct: 144 FVIQHAPCPVTVVK 157
>AT3G17020.1 | chr3:5802728-5804063 REVERSE LENGTH=164
Length = 163
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 12/144 (8%)
Query: 30 RAAFDWMLSKLVRSNAAGFHLLFLHVQ--VPDEDGFDDMDSIYASP-------PDFQRMK 80
+ A W + +VR G HL+ + + + E+G + SP D MK
Sbjct: 20 KKALSWAIDNVVRD---GDHLILITIAHDMNYEEGEMQLWETVGSPFIPMSEFSDAAVMK 76
Query: 81 QRDKIRGLHLLEHFVNQCHQLEIKCEAWIKQGDPKEVICSEVKRVQPDLLVVGSRGLGPF 140
+ L+ + I I GDP+E IC+ +++ LV+G+RGLG
Sbjct: 77 KYALKPDAETLDIVNTAARKKTITVVMKIYWGDPREKICAAAEQIPLSSLVMGNRGLGGL 136
Query: 141 QRVFVGTVSEFCVKHADCPVITIK 164
+R+ +G+VS V + CPV +K
Sbjct: 137 KRMIMGSVSNHVVNNVACPVTVVK 160
>AT2G47710.1 | chr2:19555045-19555956 REVERSE LENGTH=163
Length = 162
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 111 QGDPKEVICSEVKRVQPDLLVVGSRGLGPFQRVFVGTVSEFCVKHADCPVITIKR 165
+GD + ++C V + +LVVGS G G +R +G+ S++C HA C V+ +K+
Sbjct: 103 EGDARNILCEVVDKHHASILVVGSHGYGAIKRAVLGSTSDYCAHHAHCSVMIVKK 157
>AT2G21620.2 | chr2:9248749-9249986 FORWARD LENGTH=194
Length = 193
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 90 LLEHFVNQCHQLE-IKCEAWIKQGDPKEVICSEVKRVQPDLLVVGSRGLGPFQRVFVGTV 148
L+E + +Q+ +K A + +GD +VIC E ++V+P ++VG+RG + V G+V
Sbjct: 97 LMEKLAVEAYQVAMVKSVARVVEGDAGKVICKEAEKVKPAAVIVGTRGRSLVRSVLQGSV 156
Query: 149 SEFCVKHA-DCPVITI--KRKADEAPQD 173
SE+C + PVI + K DE+ D
Sbjct: 157 SEYCFHNCKSAPVIIVPGKEAGDESIVD 184
>AT1G11360.1 | chr1:3822171-3822899 REVERSE LENGTH=243
Length = 242
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 109 IKQGDPKEVICSEVKRVQPDLLVVGSRGLGPFQRVF---VGTVSEFCVKHADCPVITIKR 165
+K D KE +C EV+R+ L++GSRG G +R +G+VS++ V H CPV+ ++
Sbjct: 135 VKDHDMKERLCLEVERLGLSTLIMGSRGFGATKRSSKGRLGSVSDYSVHHCACPVVVVRF 194
Query: 166 KADEAPQD 173
D+ +D
Sbjct: 195 PDDKDGED 202
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.138 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,169,625
Number of extensions: 169241
Number of successful extensions: 339
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 337
Number of HSP's successfully gapped: 14
Length of query: 177
Length of database: 11,106,569
Length adjustment: 92
Effective length of query: 85
Effective length of database: 8,584,297
Effective search space: 729665245
Effective search space used: 729665245
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 108 (46.2 bits)