Os02g0701900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glucose/ribitol dehydrogenase family protein.
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Os02g0701900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glucose/ribitol dehydrogenase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.27 | 0.456 | 8.91 | -0.459 | 0.26 | 1.07 | -0.0785 | -1.64 | -0.254 | 2.52 | 9.263 | 4112 | -- | -- |
| 96.82 | 0.458 | 8.85 | -0.129 | 0.309 | 1.16 | -0.216 | -- | -0.2 | 2.79 | 10.38 | 6223 | -- | -- |
| 94.28 | 0.452 | 8.91 | -0.463 | 0.26 | 1.07 | -- | -1.66 | -0.255 | 2.39 | 9.483 | 4111 | -- | -- |
| 95.33 | 0.455 | 8.89 | -0.307 | 0.283 | 1.26 | -- | -- | -0.331 | 2.48 | 9.519 | 10736 | -- | -- |
| 98 | 0.461 | 8.91 | -0.465 | -- | 1.15 | -- | -1.65 | -0.259 | -- | 9.427 | 3974 | -- | -- |
| 120.55 | 0.515 | 8.79 | 0.437 | 0.333 | -- | -0.127 | -- | 0.0719 | 2.41 | -- | -- | -- | -- |
| 120.6 | 0.514 | 8.79 | 0.44 | 0.332 | -- | -- | -- | 0.0729 | 2.25 | -- | -- | -- | -- |
| 99.87 | 0.465 | 8.89 | -0.348 | -- | 1.29 | -- | -- | -0.336 | -- | 8.628 | 11084 | -- | -- |
| 96.92 | 0.459 | 8.87 | -- | 0.305 | 1.07 | -- | -- | -0.242 | 2.43 | 12.39 | 10667 | -- | -- |
| 127.16 | 0.527 | 8.79 | 0.454 | -- | -- | -- | -- | 0.0809 | -- | -- | -- | -- | -- |
| 125.71 | 0.524 | 8.8 | -- | 0.34 | -- | -- | -- | 0.0238 | 2.28 | -- | -- | -- | -- |
| 101.8 | 0.47 | 8.86 | -- | -- | 1.1 | -- | -- | -0.246 | -- | 9.099 | 9811 | -- | -- |
| 132.6 | 0.537 | 8.8 | -- | -- | -- | -- | -- | 0.0305 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.33 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 9 | 88.62 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 9 |
| 12 | 88.76 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 21 |
| 32 | 89.56 | humidity | 90 | 14400 | > th | dose dependent | rect. | 9 | 17 |
| 39 | 89.64 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 14 |
| 49 | 89.73 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 19 |
| 65 | 89.96 | humidity | 80 | 14400 | > th | dose dependent | rect. | 18 | 5 |
| 69 | 89.98 | humidity | 90 | 14400 | > th | dose dependent | sin | 1 | NA |
| 76 | 90.00 | humidity | 90 | 14400 | > th | dose dependent | sin | 17 | NA |
| 83 | 90.04 | humidity | 80 | 14400 | > th | dose dependent | rect. | 17 | 7 |
| 94 | 90.09 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 113 | 90.19 | humidity | 80 | 14400 | > th | dose dependent | rect. | 17 | 20 |
| 121 | 90.23 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 20 |
| 125 | 90.23 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 166 | 90.36 | humidity | 80 | 14400 | > th | dose independent | rect. | 8 | 4 |
| 169 | 90.37 | humidity | 80 | 14400 | > th | dose independent | rect. | 7 | 13 |
| 174 | 90.38 | humidity | 90 | 14400 | < th | dose independent | rect. | 9 | 16 |
| 204 | 90.46 | humidity | 70 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 217 | 90.49 | humidity | 80 | 14400 | < th | dose independent | rect. | 8 | 12 |
| 240 | 90.55 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 244 | 90.57 | humidity | 80 | 14400 | > th | dose dependent | no | NA | NA |
| 281 | 90.67 | humidity | 90 | 14400 | > th | dose independent | rect. | 9 | 17 |
| 301 | 90.72 | humidity | 80 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 320 | 90.75 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 329 | 90.77 | humidity | 90 | 14400 | < th | dose independent | sin | 18 | NA |
| 330 | 90.77 | humidity | 80 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 339 | 90.78 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 23 |
| 356 | 90.82 | humidity | 80 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 413 | 90.91 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 439 | 90.95 | humidity | 80 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 452 | 90.97 | humidity | 90 | 14400 | > th | dose independent | rect. | 1 | 22 |
| 489 | 91.04 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 491 | 91.04 | radiation | 20 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 503 | 91.07 | humidity | 90 | 14400 | > th | dose independent | sin | 18 | NA |
| 509 | 91.08 | humidity | 80 | 14400 | < th | dose independent | rect. | 8 | 5 |
| 513 | 91.08 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 23 |
| 526 | 91.11 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 9 |
| 610 | 91.24 | humidity | 90 | 14400 | < th | dose independent | no | NA | NA |
| 611 | 91.24 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 617 | 91.24 | humidity | 70 | 14400 | > th | dose dependent | rect. | 9 | 10 |
| 624 | 91.25 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 627 | 91.25 | humidity | 90 | 14400 | < th | dose independent | rect. | 17 | 23 |
| 632 | 91.26 | wind | 1 | 43200 | > th | dose dependent | rect. | 6 | 3 |
| 642 | 91.28 | humidity | 90 | 14400 | > th | dose independent | no | NA | NA |
| 652 | 91.29 | humidity | 90 | 14400 | < th | dose independent | rect. | 13 | 23 |
| 666 | 91.30 | humidity | 90 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 673 | 91.31 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 23 |
| 675 | 91.31 | wind | 9 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 681 | 91.32 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 23 |
| 698 | 91.34 | humidity | 90 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 715 | 91.35 | humidity | 90 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 718 | 91.35 | radiation | 20 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 798 | 91.40 | humidity | 70 | 14400 | > th | dose dependent | rect. | 14 | 5 |
| 846 | 91.44 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 848 | 91.44 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 901 | 91.49 | humidity | 80 | 14400 | > th | dose independent | sin | 23 | NA |
| 918 | 91.50 | humidity | 80 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 960 | 91.53 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 4 |
| 998 | 91.56 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 10 |