BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0701900 Os02g0701900|AK060640
(327 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G19200.1 | chr5:6458995-6460690 FORWARD LENGTH=332 308 3e-84
AT3G06060.1 | chr3:1828296-1830160 REVERSE LENGTH=327 304 5e-83
AT2G29360.1 | chr2:12603849-12605121 FORWARD LENGTH=272 55 6e-08
AT2G29150.1 | chr2:12535715-12536964 REVERSE LENGTH=269 54 1e-07
AT2G29370.1 | chr2:12606059-12607363 FORWARD LENGTH=269 52 6e-07
AT3G03330.1 | chr3:783572-786148 REVERSE LENGTH=329 50 1e-06
AT2G29290.2 | chr2:12586498-12587684 FORWARD LENGTH=263 50 2e-06
AT3G03350.2 | chr3:791273-794553 FORWARD LENGTH=360 49 3e-06
AT2G29350.1 | chr2:12601036-12602222 FORWARD LENGTH=270 49 4e-06
AT3G26760.1 | chr3:9843639-9844899 FORWARD LENGTH=301 49 5e-06
>AT5G19200.1 | chr5:6458995-6460690 FORWARD LENGTH=332
Length = 331
Score = 308 bits (788), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 151/292 (51%), Positives = 196/292 (67%), Gaps = 2/292 (0%)
Query: 35 KGRHVLITGGSSGIGLXXXXXXXXXXXRVSIXXXXXXXXXXXXXXIRAATGXXXXXXXXX 94
K RHV ITGGSSGIGL +VSI I+ ATG
Sbjct: 36 KFRHVFITGGSSGIGLALAHRAVSEGAKVSILARSTEKLAEAKRSIQLATGVEVATFSAD 95
Query: 95 XXXXXXXXXXXXXXGPVDVLVCNHGVFVPQELEKQEMEEVKWMVDINLMGTFHLVKAALP 154
GP+DVL+ N GVF+ +ELEKQ EEVK+M+D+NL G+F+++KAALP
Sbjct: 96 VRDYDAVSKAIDESGPIDVLIVNQGVFIGKELEKQSPEEVKFMIDVNLTGSFNVIKAALP 155
Query: 155 AMKERTKETRLPASIAIMSSQAGQVGVYGYTAYSASKFALRGLGEALQHEVIADNIHVSL 214
AMK R E R PASI+++SSQAGQ G+YGYTAYSASKF L+GL +ALQ EVI+D IHV+L
Sbjct: 156 AMKAR--EGRGPASISLVSSQAGQAGIYGYTAYSASKFGLQGLAQALQQEVISDGIHVTL 213
Query: 215 IFPPDTETPGFAEENKRRPELTNIIAGSSGGMKADDVARKALDGIKSGKFIVPCNFEGAM 274
+FPPDT+TPGF +E K+RPELT+IIA SSG MK ++VA+ DGIK+GKF V C+F G +
Sbjct: 214 LFPPDTDTPGFEQELKKRPELTSIIAASSGSMKTNEVAKICFDGIKAGKFTVTCHFIGFL 273
Query: 275 LAVATAGLSPQSSPLTAFLEIIGAGVMRFAAICFQFNWFMTIENWYAKNKKH 326
L++A+ G+SPQ S A E++ G++R A++ FQ+ W+ TIE W +NKK
Sbjct: 274 LSIASTGMSPQGSFWLALTEVMFGGLIRLASLVFQWQWYKTIEKWSQRNKKE 325
>AT3G06060.1 | chr3:1828296-1830160 REVERSE LENGTH=327
Length = 326
Score = 304 bits (778), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 152/291 (52%), Positives = 191/291 (65%), Gaps = 2/291 (0%)
Query: 35 KGRHVLITGGSSGIGLXXXXXXXXXXXRVSIXXXXXXXXXXXXXXIRAATGXXXXXXXXX 94
K RH ITGGSSGIGL RVSI I+ ATG
Sbjct: 38 KSRHAFITGGSSGIGLALAHRAASEGARVSILARSGSKLEEAKKSIQLATGVEVATFSAD 97
Query: 95 XXXXXXXXXXXXXXGPVDVLVCNHGVFVPQELEKQEMEEVKWMVDINLMGTFHLVKAALP 154
GP+DVL+ N GVF +EL K E+VK+ +D+NL+G+F+++KAALP
Sbjct: 98 VRDYDAVSKAIDESGPIDVLIVNQGVFTAKELVKHSPEDVKFTIDVNLVGSFNVIKAALP 157
Query: 155 AMKERTKETRLPASIAIMSSQAGQVGVYGYTAYSASKFALRGLGEALQHEVIADNIHVSL 214
AMK R + R PASI+++SSQAGQVGVYGY AYSASKF L+GL +ALQ EVI+D+IHV+L
Sbjct: 158 AMKAR--KDRGPASISLVSSQAGQVGVYGYAAYSASKFGLQGLAQALQQEVISDDIHVTL 215
Query: 215 IFPPDTETPGFAEENKRRPELTNIIAGSSGGMKADDVARKALDGIKSGKFIVPCNFEGAM 274
IFPPDT TPGF EE K RPE+T IIA SSG M+ ++VA+KA+DGIK+G F V CNFEG +
Sbjct: 216 IFPPDTNTPGFEEEQKSRPEVTAIIAASSGSMETEEVAKKAMDGIKAGNFTVSCNFEGFL 275
Query: 275 LAVATAGLSPQSSPLTAFLEIIGAGVMRFAAICFQFNWFMTIENWYAKNKK 325
L++AT G+SPQ S AFLE+I AG +R A+ FQ++W+ IE W K
Sbjct: 276 LSLATTGMSPQRSFWLAFLEVITAGPIRLIALFFQWDWYKAIEKWSKTKTK 326
>AT2G29360.1 | chr2:12603849-12605121 FORWARD LENGTH=272
Length = 271
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 109 GPVDVLVCNHGVFVPQELEKQEMEEVKWMVDINLMGTFHLVKAALPAMKERTKETRLPAS 168
G +++LV N G + + + E+ + + NL FHL + A P +K S
Sbjct: 95 GKLNILVNNVGTCIVKPTLQHTAEDFSFTMATNLESAFHLSQLAHPLLKASGS-----GS 149
Query: 169 IAIMSSQAGQVGVYGYTAYSASKFALRGLGEALQHEVIADNIHVSLIFPPDTETPGFAE 227
I ++SS +G V V G + Y SK A+ LG L E +DNI + + P ETP E
Sbjct: 150 IVLISSVSGVVHVNGASIYGVSKGAMNQLGRNLACEWASDNIRTNSVCPWFIETPLVTE 208
>AT2G29150.1 | chr2:12535715-12536964 REVERSE LENGTH=269
Length = 268
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 10/128 (7%)
Query: 109 GPVDVLVCNHGVFVPQELEKQEMEEVKWMVDINLMGTFHLVKAALPAMKERTKETRLPAS 168
G +++LV N G + + + E+ +++ NL FHL + A P +K S
Sbjct: 95 GKLNILVNNAGTGIIKPSTEYTAEDYSFLMATNLESAFHLSQIAHPLLKASGS-----GS 149
Query: 169 IAIMSSQAGQVGVYGYTAYSASKFALRGLGEALQHEVIADNIHVSLIFPPDTETPG---- 224
I MSS AG V G + Y ASK A+ LG +L E +DNI V+ + P TP
Sbjct: 150 IVFMSSVAGLVHT-GASIYGASKGAMNQLGRSLACEWASDNIRVNSVCPWVITTPLTSFI 208
Query: 225 FAEENKRR 232
F++E R+
Sbjct: 209 FSDEKLRK 216
>AT2G29370.1 | chr2:12606059-12607363 FORWARD LENGTH=269
Length = 268
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 109 GPVDVLVCNHGVFVPQELEKQEMEEVKWMVDINLMGTFHLVKAALPAMKERTKETRLPAS 168
G + +LV N G+ V + + EE +++ NL TFH + A P +K +
Sbjct: 95 GKLSILVPNVGIGVLKPTTECTAEEFSFIIATNLESTFHFSQLAHPLLKASGS-----GN 149
Query: 169 IAIMSSQAGQVGVYGYTAYSASKFALRGLGEALQHEVIADNIHVSLIFPPDTETP 223
I +MSS AG V + + Y A+K A+ L L E +DNI + + P TP
Sbjct: 150 IVLMSSVAGVVNLGNTSIYGATKGAMNQLARNLACEWASDNIRANSVCPWFITTP 204
>AT3G03330.1 | chr3:783572-786148 REVERSE LENGTH=329
Length = 328
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
Query: 111 VDVLVCNHGVFVPQELEKQEMEE-VKWMVDINLMGTFHLVKAALPAMKERTKETRLPASI 169
VD LV N P+ EE +K D+N+ GT L K P M ++
Sbjct: 126 VDYLVHNAAFERPKSKASDASEETLKTTFDVNVFGTISLTKLVAPHMLKQGG-----GHF 180
Query: 170 AIMSSQAGQVGVYGYTAYSASKFALRGLGEALQHEVIADNIHVSLIFPPDTET 222
++SS AG+V G YSASK AL G +L+ E I V+++ P ET
Sbjct: 181 VVISSAAGKVPSPGQAIYSASKHALHGYFHSLRSEFCQKGIKVTVVCPGPIET 233
>AT2G29290.2 | chr2:12586498-12587684 FORWARD LENGTH=263
Length = 262
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 10/131 (7%)
Query: 109 GPVDVLVCNHGVFVPQELEKQEMEEVKWMVDINLMGTFHLVKAALPAMKERTKETRLPAS 168
G +++LV N G + + + EE +++ NL FH+ + A P +K S
Sbjct: 86 GKLNILVNNVGTLMLKPTTEYTAEEFSFLMATNLDSAFHISQLAHPLLKASGS-----GS 140
Query: 169 IAIMSSQAGQVGVYGYTAYSASKFALRGLGEALQHEVIADNIHVSLIFPPDTETPGFA-- 226
I +MSS AG V V + Y A+K A+ L L E +DNI + I P TP +
Sbjct: 141 IVLMSSIAGVVHVGVGSIYGATKGAMNQLARNLACEWASDNIRTNAICPWLITTPLISDL 200
Query: 227 ---EENKRRPE 234
EE K+ E
Sbjct: 201 LSVEEMKKEAE 211
>AT3G03350.2 | chr3:791273-794553 FORWARD LENGTH=360
Length = 359
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 132 EEVKWMVDINLMGTFHLVKAALPAMKERTKETRLPASIAIMSSQAGQVGVYGYTAYSASK 191
E + DIN+ GT L+K P M ++ ++SS AG+V G YSASK
Sbjct: 252 ETINTTFDINVFGTITLIKLVTPHMLKQGG-----GHFVVISSAAGKVPSPGQAIYSASK 306
Query: 192 FALRGLGEALQHEVIADNIHVSLIFPPDTET 222
AL G +L+ E + I V+++ P ET
Sbjct: 307 HALHGYFHSLRSEFCQEGIKVTVVIPGPIET 337
>AT2G29350.1 | chr2:12601036-12602222 FORWARD LENGTH=270
Length = 269
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 9/128 (7%)
Query: 109 GPVDVLVCNHGVFVPQELEKQEMEEVKWMVDINLMGTFHLVKAALPAMKERTKETRLPAS 168
G +++LV N G + + + E+ +++ NL FHL + A P +K S
Sbjct: 94 GKLNILVNNVGTSIFKPTTEYTAEDFSFVMATNLESAFHLSQLAHPLLKASGS-----GS 148
Query: 169 IAIMSSQAGQVGVYGYTAYSASKFALRGLGEALQHEVIADNIHVSLIFPPDTETP----G 224
I ++SS AG V V + Y A+K A+ L L E +DNI + + P TP
Sbjct: 149 IVLISSAAGVVHVNVGSIYGATKGAMNQLARNLACEWASDNIRTNSVCPWYITTPLSNDF 208
Query: 225 FAEENKRR 232
F EE K+
Sbjct: 209 FDEEFKKE 216
>AT3G26760.1 | chr3:9843639-9844899 FORWARD LENGTH=301
Length = 300
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 28/241 (11%)
Query: 35 KGRHVLITGGSSGIGLXXXXXXXXXXXRVSIXXXXXXXXXXXXXXIRAATGXXXXXXXXX 94
+G+ +ITGG+SGIG +V I + +A
Sbjct: 37 EGKVAVITGGASGIGKATAEEFVSQGAQVIIVDIDEEAGHMVATELGSAAHFLRCDVTEE 96
Query: 95 XXXXXXXXXXXXXXGPVDVLVCNHGV---FVPQELEKQEMEEVKWMVDINLMGTFHLVKA 151
G +DV++ + G+ P + +M+ ++ +N+ GT +K
Sbjct: 97 EQIAKAVETAVTRHGKLDVMLNSAGISCSISPPSIADLDMDTYDKVMRLNVRGTVLGIKH 156
Query: 152 ALPAMKERTKETRLPA---SIAIMSSQAGQVGVYGYTAYSASKFALRGLGEALQHEVIAD 208
A AM +PA SI +SS +G +G G AYS SKF + G+ + + E+
Sbjct: 157 AARAM--------IPAGSGSILCLSSISGLMGGLGPHAYSISKFTIPGVVKTVASELCKH 208
Query: 209 NIHVSLIFPPDTETP--------GFAEENKRRPELTNIIAGSSGGMKAD-----DVARKA 255
+ ++ I P TP FA + R +L I+ ++G +K + DVA+ A
Sbjct: 209 GLRINCISPAGIPTPLTLRMFREAFAGHSIREEQLLAIV-NATGELKGEKCEEIDVAKAA 267
Query: 256 L 256
L
Sbjct: 268 L 268
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.135 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,187,432
Number of extensions: 190838
Number of successful extensions: 520
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 526
Number of HSP's successfully gapped: 10
Length of query: 327
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 228
Effective length of database: 8,392,385
Effective search space: 1913463780
Effective search space used: 1913463780
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)