Os02g0699300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ADP-ribosylation factor-like protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0699300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to ADP-ribosylation factor-like protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.31 | 0.34 | 12.1 | -0.081 | 0.348 | -0.693 | 0.0219 | 0.887 | -0.215 | 10.4 | 88.92 | 141 | -- | -- |
| 54.21 | 0.343 | 12.1 | -0.0811 | 0.348 | -0.65 | -0.0287 | -- | -0.226 | 10.1 | 88.03 | 136 | -- | -- |
| 52.27 | 0.337 | 12.1 | -0.0699 | 0.358 | -0.698 | -- | 0.883 | -0.21 | 10.3 | 88.78 | 158 | -- | -- |
| 54.15 | 0.343 | 12.1 | -0.0404 | 0.337 | -0.642 | -- | -- | -0.201 | 10.2 | 88.2 | 136 | -- | -- |
| 59.12 | 0.358 | 12.1 | -0.0855 | -- | -0.714 | -- | 0.748 | -0.228 | -- | 88.38 | 102 | -- | -- |
| 64.54 | 0.377 | 12.1 | -0.11 | 0.491 | -- | -0.0555 | -- | -0.0832 | 13.2 | -- | -- | -- | -- |
| 64.56 | 0.376 | 12.1 | -0.112 | 0.491 | -- | -- | -- | -0.0836 | 13.2 | -- | -- | -- | -- |
| 60.4 | 0.362 | 12.1 | -0.0422 | -- | -0.651 | -- | -- | -0.215 | -- | 87.38 | 69 | -- | -- |
| 54.2 | 0.343 | 12.1 | -- | 0.339 | -0.647 | -- | -- | -0.196 | 10.2 | 88.19 | 136 | -- | -- |
| 79.49 | 0.417 | 12.1 | -0.131 | -- | -- | -- | -- | -0.0935 | -- | -- | -- | -- | -- |
| 64.89 | 0.377 | 12.1 | -- | 0.493 | -- | -- | -- | -0.0711 | 13.2 | -- | -- | -- | -- |
| 60.35 | 0.362 | 12.1 | -- | -- | -0.614 | -- | -- | -0.199 | -- | 84.69 | 53 | -- | -- |
| 79.94 | 0.417 | 12.1 | -- | -- | -- | -- | -- | -0.0789 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.79 | radiation | 1.0 | 270 | > th | dose independent | sin | 5 | NA |
| 2 | 43.79 | radiation | 1.0 | 270 | < th | dose independent | sin | 5 | NA |
| 7 | 44.30 | radiation | 1.0 | 270 | < th | dose dependent | sin | 4 | NA |
| 8 | 44.37 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 13 |
| 17 | 44.91 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 13 |
| 25 | 45.22 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 7 |
| 31 | 45.38 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 33 | 45.47 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 43 | 46.10 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 3 | 6 |
| 45 | 46.12 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 7 |
| 76 | 46.28 | humidity | 90.0 | 90 | < th | dose independent | rect. | 20 | 18 |
| 78 | 46.35 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 82 | 46.40 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 88 | 46.46 | humidity | 90.0 | 90 | < th | dose independent | rect. | 20 | 16 |
| 117 | 46.79 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 125 | 46.86 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 23 | 7 |
| 127 | 46.87 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 130 | 46.96 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 131 | 46.96 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 133 | 46.96 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 134 | 46.96 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 137 | 46.96 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 138 | 46.96 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 142 | 46.96 | humidity | 90.0 | 10 | < th | dose independent | rect. | 7 | 7 |
| 145 | 46.99 | radiation | 10.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 151 | 47.00 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 20 | 7 |
| 152 | 47.01 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 12 |
| 153 | 47.03 | wind | 7.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 174 | 47.17 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 177 | 47.18 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 19 |
| 178 | 47.18 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 180 | 47.20 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 188 | 47.21 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 189 | 47.21 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 195 | 47.24 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 197 | 47.24 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 199 | 47.25 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 8 |
| 202 | 47.26 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 205 | 47.28 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 8 |
| 207 | 47.28 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 212 | 47.31 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 218 | 47.38 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 224 | 47.47 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 226 | 47.49 | humidity | 80.0 | 90 | > th | dose dependent | sin | 5 | NA |
| 247 | 47.58 | humidity | 90.0 | 90 | < th | dose independent | sin | 5 | NA |
| 258 | 47.63 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 264 | 47.65 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 16 |
| 265 | 47.65 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 267 | 47.66 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 7 |
| 270 | 47.68 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 271 | 47.68 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 276 | 47.69 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 289 | 47.77 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 293 | 47.79 | humidity | 80.0 | 30 | > th | dose independent | rect. | 3 | 5 |
| 307 | 47.85 | wind | 5.0 | 90 | < th | dose independent | rect. | 7 | 20 |
| 372 | 48.05 | humidity | 90.0 | 90 | > th | dose independent | sin | 5 | NA |
| 398 | 48.16 | wind | 1.0 | 270 | > th | dose independent | rect. | 10 | 9 |
| 435 | 48.23 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 436 | 48.23 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 442 | 48.25 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 446 | 48.25 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 20 | 16 |
| 455 | 48.29 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 463 | 48.32 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 6 |
| 480 | 48.37 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 484 | 48.39 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 487 | 48.40 | wind | 9.0 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 500 | 48.44 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 8 |
| 501 | 48.44 | temperature | 15.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 511 | 48.48 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 6 |
| 513 | 48.48 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 6 |
| 562 | 48.61 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 563 | 48.61 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 6 |
| 564 | 48.61 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 18 |
| 585 | 48.66 | humidity | 90.0 | 90 | < th | dose independent | rect. | 23 | 15 |
| 591 | 48.68 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 597 | 48.70 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 18 |
| 603 | 48.71 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 612 | 48.74 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 634 | 48.77 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 642 | 48.79 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 8 |
| 646 | 48.79 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 672 | 48.84 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 689 | 48.86 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 690 | 48.86 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 12 |
| 714 | 48.88 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 3 | 1 |
| 723 | 48.89 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 7 |
| 755 | 48.94 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 756 | 48.94 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 785 | 48.98 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 786 | 48.98 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 787 | 48.98 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 14 |
| 788 | 48.98 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 798 | 49.01 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 15 |
| 800 | 49.02 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 805 | 49.03 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 18 |
| 807 | 49.03 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 18 |
| 833 | 49.08 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 16 |
| 842 | 49.08 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 868 | 49.14 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 16 |
| 869 | 49.14 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 886 | 49.18 | humidity | 90.0 | 10 | < th | dose independent | rect. | 7 | 5 |
| 952 | 49.34 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 953 | 49.34 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 955 | 49.34 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 956 | 49.34 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 959 | 49.34 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 960 | 49.34 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 962 | 49.34 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 967 | 49.34 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 23 |
| 969 | 49.34 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 987 | 49.36 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 17 |
| 993 | 49.39 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 10 |
| 996 | 49.39 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 16 |