BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0699300 Os02g0699300|AK067761
(124 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G17060.1 | chr5:5611056-5612639 FORWARD LENGTH=193 180 2e-46
AT3G03120.1 | chr3:717345-718914 FORWARD LENGTH=193 176 2e-45
AT1G10630.1 | chr1:3513189-3514230 REVERSE LENGTH=182 143 2e-35
AT1G23490.1 | chr1:8337232-8338373 FORWARD LENGTH=182 142 3e-35
AT1G70490.1 | chr1:26564162-26565152 REVERSE LENGTH=182 142 3e-35
AT3G62290.1 | chr3:23052287-23053545 FORWARD LENGTH=182 142 3e-35
AT2G47170.1 | chr2:19367264-19368518 FORWARD LENGTH=182 142 4e-35
AT5G14670.1 | chr5:4729319-4730495 FORWARD LENGTH=189 142 5e-35
AT2G15310.1 | chr2:6653947-6655187 FORWARD LENGTH=206 125 6e-30
AT2G24765.1 | chr2:10562822-10564961 FORWARD LENGTH=183 122 3e-29
AT3G22950.1 | chr3:8136364-8137513 REVERSE LENGTH=184 97 2e-21
AT1G02430.1 | chr1:495175-496062 REVERSE LENGTH=191 85 9e-18
AT1G02440.1 | chr1:496586-497479 REVERSE LENGTH=191 83 4e-17
AT2G18390.1 | chr2:7988335-7989374 FORWARD LENGTH=186 82 7e-17
AT5G52210.1 | chr5:21205567-21206840 FORWARD LENGTH=206 67 2e-12
AT3G49870.1 | chr3:18492674-18494021 REVERSE LENGTH=185 62 9e-11
AT5G37680.1 | chr5:14969797-14971098 REVERSE LENGTH=185 61 1e-10
AT3G49860.1 | chr3:18491261-18492165 REVERSE LENGTH=177 59 5e-10
AT5G67560.1 | chr5:26950579-26951913 FORWARD LENGTH=185 58 1e-09
AT1G56330.1 | chr1:21086845-21088478 REVERSE LENGTH=194 56 6e-09
AT4G02080.1 | chr4:921554-922547 FORWARD LENGTH=194 53 4e-08
AT3G62560.1 | chr3:23137539-23138880 FORWARD LENGTH=194 53 4e-08
AT1G09180.1 | chr1:2965147-2965941 FORWARD LENGTH=194 52 5e-08
AT3G09910.1 | chr3:3036864-3038121 REVERSE LENGTH=206 45 8e-06
>AT5G17060.1 | chr5:5611056-5612639 FORWARD LENGTH=193
Length = 192
Score = 180 bits (456), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/93 (92%), Positives = 87/93 (93%)
Query: 1 MGQAFRKLFDAFFGTSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
MGQAFRKLFD FFG EMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN
Sbjct: 1 MGQAFRKLFDTFFGNQEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
Query: 61 VMFTVWDVGGQEKLRPLWRHYFNNTDGLVCFVS 93
VMFTVWDVGGQEKLRPLWRHYFNNTDGL+ V
Sbjct: 61 VMFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVD 93
>AT3G03120.1 | chr3:717345-718914 FORWARD LENGTH=193
Length = 192
Score = 176 bits (447), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 84/93 (90%), Positives = 86/93 (92%)
Query: 1 MGQAFRKLFDAFFGTSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
MGQ FRKLFD FFG EMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN
Sbjct: 1 MGQTFRKLFDTFFGNQEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
Query: 61 VMFTVWDVGGQEKLRPLWRHYFNNTDGLVCFVS 93
V+FTVWDVGGQEKLRPLWRHYFNNTDGL+ V
Sbjct: 61 VIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVD 93
>AT1G10630.1 | chr1:3513189-3514230 REVERSE LENGTH=182
Length = 181
Score = 143 bits (361), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 87/120 (72%), Gaps = 11/120 (9%)
Query: 1 MGQAFRKLFDAFFGTSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
MG +F KLF F EMR++M+GLDAAGKTTILYKL +GE+++T+PTIGFNVE V+YKN
Sbjct: 1 MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 61 VMFTVWDVGGQEKLRPLWRHYFNNTDGLVCFVSFVVIFLGIRERFV------HRCIKEGK 114
+ FTVWDVGGQ+K+RPLWRHYF NT GL+ V+ R+R V HR + E +
Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLI-----FVVDSNDRDRVVEARDELHRMLNEDE 115
>AT1G23490.1 | chr1:8337232-8338373 FORWARD LENGTH=182
Length = 181
Score = 142 bits (359), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 77/93 (82%)
Query: 1 MGQAFRKLFDAFFGTSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
MG +F KLF F EMR++M+GLDAAGKTTILYKL +GE+++T+PTIGFNVE V+YKN
Sbjct: 1 MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 61 VMFTVWDVGGQEKLRPLWRHYFNNTDGLVCFVS 93
+ FTVWDVGGQ+K+RPLWRHYF NT GL+ V
Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 93
>AT1G70490.1 | chr1:26564162-26565152 REVERSE LENGTH=182
Length = 181
Score = 142 bits (359), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 77/93 (82%)
Query: 1 MGQAFRKLFDAFFGTSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
MG +F KLF F EMR++M+GLDAAGKTTILYKL +GE+++T+PTIGFNVE V+YKN
Sbjct: 1 MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 61 VMFTVWDVGGQEKLRPLWRHYFNNTDGLVCFVS 93
+ FTVWDVGGQ+K+RPLWRHYF NT GL+ V
Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 93
>AT3G62290.1 | chr3:23052287-23053545 FORWARD LENGTH=182
Length = 181
Score = 142 bits (359), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 87/120 (72%), Gaps = 11/120 (9%)
Query: 1 MGQAFRKLFDAFFGTSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
MG +F KLF F EMR++M+GLDAAGKTTILYKL +GE+++T+PTIGFNVE V+YKN
Sbjct: 1 MGLSFGKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 61 VMFTVWDVGGQEKLRPLWRHYFNNTDGLVCFVSFVVIFLGIRERFV------HRCIKEGK 114
+ FTVWDVGGQ+K+RPLWRHYF NT GL+ V+ R+R V HR + E +
Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLI-----FVVDSNDRDRVVEARDELHRMLNEDE 115
>AT2G47170.1 | chr2:19367264-19368518 FORWARD LENGTH=182
Length = 181
Score = 142 bits (358), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 87/120 (72%), Gaps = 11/120 (9%)
Query: 1 MGQAFRKLFDAFFGTSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
MG +F KLF F EMR++M+GLDAAGKTTILYKL +GE+++T+PTIGFNVE V+YKN
Sbjct: 1 MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 61 VMFTVWDVGGQEKLRPLWRHYFNNTDGLVCFVSFVVIFLGIRERFV------HRCIKEGK 114
+ FTVWDVGGQ+K+RPLWRHYF NT GL+ V+ R+R V HR + E +
Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLI-----FVVDSNDRDRVVEARDELHRMLNEDE 115
>AT5G14670.1 | chr5:4729319-4730495 FORWARD LENGTH=189
Length = 188
Score = 142 bits (357), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 86/120 (71%), Gaps = 11/120 (9%)
Query: 1 MGQAFRKLFDAFFGTSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
MG F KLF F EMR++M+GLDAAGKTTILYKL +GE+++T+PTIGFNVE V+YKN
Sbjct: 1 MGLNFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 61 VMFTVWDVGGQEKLRPLWRHYFNNTDGLVCFVSFVVIFLGIRERFV------HRCIKEGK 114
+ FTVWDVGGQ+K+RPLWRHYF NT GL+ V+ R+R V HR + E +
Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLI-----FVVDSNDRDRVVEARDELHRMLNEDE 115
>AT2G15310.1 | chr2:6653947-6655187 FORWARD LENGTH=206
Length = 205
Score = 125 bits (314), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 72/92 (78%)
Query: 1 MGQAFRKLFDAFFGTSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
MG F ++ F S++R++M+GLD +GKTTILYKL +GEV++TVPTIGFN+E V+YK
Sbjct: 1 MGARFSRIAKRFLPKSKVRILMVGLDGSGKTTILYKLKLGEVVTTVPTIGFNLETVEYKG 60
Query: 61 VMFTVWDVGGQEKLRPLWRHYFNNTDGLVCFV 92
+ FTVWD+GGQEK+R LWRHYF N GL+ V
Sbjct: 61 INFTVWDIGGQEKIRKLWRHYFQNAQGLIFVV 92
>AT2G24765.1 | chr2:10562822-10564961 FORWARD LENGTH=183
Length = 182
Score = 122 bits (307), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
Query: 1 MGQAFRKLFDAFFGTSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
MG F ++F + FG E R+++LGLD AGKTTILY+L +GEV+ST+PTIGFNVE VQY N
Sbjct: 1 MGILFTRMFSSVFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60
Query: 61 VMFTVWDVGGQEKLRPLWRHYFNNTDGLVCFV-SFVVIFLGIRERFVHRCIKE 112
+ F VWD+GGQ +RP WR YF NT ++ V S +G+ + H ++E
Sbjct: 61 IKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEE 113
>AT3G22950.1 | chr3:8136364-8137513 REVERSE LENGTH=184
Length = 183
Score = 96.7 bits (239), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 63/92 (68%)
Query: 1 MGQAFRKLFDAFFGTSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60
MG + + F E ++V++GLD AGKTT LYKLH+GEV++T PT+G NVE++ YKN
Sbjct: 1 MGAFMSRFWFMMFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
Query: 61 VMFTVWDVGGQEKLRPLWRHYFNNTDGLVCFV 92
+ F VWD+GGQ++LR W Y+ T ++ +
Sbjct: 61 IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVI 92
>AT1G02430.1 | chr1:495175-496062 REVERSE LENGTH=191
Length = 190
Score = 84.7 bits (208), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 1 MGQAFRKLFDAFFGTSEMRVVMLGLDAAGKTTILYKLHIGEVL-STVPTIGFNVEKVQYK 59
MG A K F FF E R+V+ GLDAAGK++I++KL GE L +T+PTIG +VE V+YK
Sbjct: 1 MGTALGKPFAGFFHQEESRIVLFGLDAAGKSSIMHKLKTGETLTTTMPTIGTDVESVKYK 60
Query: 60 NVMFTVWDVGGQE--KLRPLWRHYFNNTDGLVCFV 92
+ W++GGQ+ K P+ +H F GLV V
Sbjct: 61 DSNLRFWEMGGQQCYKWFPMTKHDFQEIAGLVLVV 95
>AT1G02440.1 | chr1:496586-497479 REVERSE LENGTH=191
Length = 190
Score = 82.8 bits (203), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 1 MGQAFRKLFDAFFGTSEMRVVMLGLDAAGKTTILYKLHIGEVL-STVPTIGFNVEKVQYK 59
MG K F FF E R+V+ GL GK++I++K GE L +T+PT+G NVE V+YK
Sbjct: 1 MGTTLGKPFAGFFHQEEARIVLFGLGGTGKSSIMHKFKTGETLTTTMPTVGLNVESVKYK 60
Query: 60 NVMFTVWDVGGQEKLR--PLWRHYFNNTDGLVCFV 92
+ W++GGQ+ PLW+H+F GLV V
Sbjct: 61 DSNLCFWEMGGQQCYMWFPLWKHWFQEIAGLVLVV 95
>AT2G18390.1 | chr2:7988335-7989374 FORWARD LENGTH=186
Length = 185
Score = 82.0 bits (201), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 18 MRVVMLGLDAAGKTTILYKLHIGEVLSTV-PTIGFNVEKVQYKNVMFTVWDVGGQEKLRP 76
MR++M+GLD +GKTTI+ K++ GE S + PT+GFN++ + Y+ +WDVGGQ+ +R
Sbjct: 17 MRILMVGLDNSGKTTIVLKIN-GEDTSVISPTLGFNIKTIIYQKYTLNIWDVGGQKTIRS 75
Query: 77 LWRHYFNNTDGLVCFVS 93
WR+YF TDGLV V
Sbjct: 76 YWRNYFEQTDGLVWVVD 92
>AT5G52210.1 | chr5:21205567-21206840 FORWARD LENGTH=206
Length = 205
Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 8 LFDAFFGTSEMRVVMLGLDAAGKTTILYKL----HIGEVLS---TVPTIGFNVEKVQYKN 60
L+ F +E V++LG+D AGKTT L KL I E L VPT+G N+ +++ N
Sbjct: 8 LWSYMFSKTEFNVLILGIDKAGKTTFLEKLKTIYSISEGLPHDRIVPTVGLNIGRIEVSN 67
Query: 61 VMFTVWDVGGQEKLRPLWRHYFNNTDGLVCFV 92
WD+GGQ LR +W Y+ L+ +
Sbjct: 68 AKIVFWDLGGQPGLRSIWEKYYEEAHALIYLI 99
>AT3G49870.1 | chr3:18492674-18494021 REVERSE LENGTH=185
Length = 184
Score = 61.6 bits (148), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 3 QAFRKLFDAFFGTSEMRVVMLGLDAAGKTTILYKLHIGEVLST-VPTIGFNVEKVQYKNV 61
+AF + F EM + ++GL AGKT+++ + G +PT+GFN+ KV NV
Sbjct: 5 EAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNV 64
Query: 62 MFTVWDVGGQEKLRPLWRHYFNNTDGLVCFV 92
+WD+GGQ + R +W Y +V V
Sbjct: 65 TIKLWDLGGQPRFRSMWERYCRAVSAIVYVV 95
>AT5G37680.1 | chr5:14969797-14971098 REVERSE LENGTH=185
Length = 184
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 11 AFFGTSEMRVVMLGLDAAGKTTILYKLHIGEVLST-VPTIGFNVEKVQYKNVMFTVWDVG 69
+ F EM + ++GL AGKT+++ + G +PT+GFN+ KV NV +WD+G
Sbjct: 13 SLFFKQEMELSLVGLQNAGKTSLVNAIATGGYSEDMIPTVGFNMRKVTKGNVTIKIWDLG 72
Query: 70 GQEKLRPLWRHYFNNTDGLV 89
GQ + R +W Y +V
Sbjct: 73 GQRRFRTMWERYCRGVSAIV 92
>AT3G49860.1 | chr3:18491261-18492165 REVERSE LENGTH=177
Length = 176
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 17 EMRVVMLGLDAAGKTTILYKLHIGEVLST-VPTIGFNVEKVQYKNVMFTVWDVGGQEKLR 75
EM + ++GL +GKT+++ + GE +PT+GFN+ KV +NV +WD+GGQ + R
Sbjct: 11 EMELSLVGLQNSGKTSLVNVVATGEYSEDMIPTVGFNMRKVTKENVAIRLWDLGGQPRFR 70
Query: 76 PLWRHY 81
+W Y
Sbjct: 71 CMWERY 76
>AT5G67560.1 | chr5:26950579-26951913 FORWARD LENGTH=185
Length = 184
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 11 AFFGTSEMRVVMLGLDAAGKTTILYKLHIGEVLST-VPTIGFNVEKVQYKNVMFTVWDVG 69
+ F EM + ++GL AGKT+++ + G +PT+GFN+ KV +V +WD+G
Sbjct: 13 SLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLG 72
Query: 70 GQEKLRPLWRHYFNNTDGLVCFV 92
GQ + R +W Y + +V V
Sbjct: 73 GQPRFRSMWERYCRSVSAIVYVV 95
>AT1G56330.1 | chr1:21086845-21088478 REVERSE LENGTH=194
Length = 193
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 8 LFDAFFG--------TSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYK 59
LFD F+G E +++ LGLD AGKTT+L+ L ++ PT E++
Sbjct: 3 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIG 62
Query: 60 NVMFTVWDVGGQEKLRPLWRHYFNNTDGLVCFVS 93
+ F +D+GG + R +W+ Y+ D +V V
Sbjct: 63 KIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVD 96
>AT4G02080.1 | chr4:921554-922547 FORWARD LENGTH=194
Length = 193
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 17 EMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVMFTVWDVGGQEKLRP 76
E +++ LGLD AGKTT+L+ L ++ PT E++ + F +D+GG + R
Sbjct: 20 EAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARR 79
Query: 77 LWRHYFNNTDGLVCFVS 93
+W+ Y+ D +V V
Sbjct: 80 VWKDYYAKVDAVVYLVD 96
>AT3G62560.1 | chr3:23137539-23138880 FORWARD LENGTH=194
Length = 193
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 8 LFDAFFG--------TSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYK 59
L D F+G E +++ LGLD AGKTT+L+ L ++ PT E++
Sbjct: 3 LVDWFYGVLATLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIG 62
Query: 60 NVMFTVWDVGGQEKLRPLWRHYFNNTDGLVCFVS 93
+ F +D+GG + R +W+ Y+ D +V V
Sbjct: 63 KIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVD 96
>AT1G09180.1 | chr1:2965147-2965941 FORWARD LENGTH=194
Length = 193
Score = 52.4 bits (124), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 13/108 (12%)
Query: 8 LFDAFFG--------TSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYK 59
LFD F+G E +++ LGLD AGKTT+L+ L ++ PT E++
Sbjct: 3 LFDWFYGILASLGLCKKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIG 62
Query: 60 NVMFTVWDVGGQEKLRPLWRHYFNNTDGLVCFVSFVVIFLGIRERFVH 107
+ F +D+GG + R +W+ + D +V V R+RFV
Sbjct: 63 KINFKAFDLGGHQIARRVWKDCYAKVDAVVYLVDAY-----DRDRFVE 105
>AT3G09910.1 | chr3:3036864-3038121 REVERSE LENGTH=206
Length = 205
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 19 RVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVE----KVQYKNVMFTVWDVGGQEKL 74
+++++G GK+++L V PTIG + + KV+ K + T+WD GQEK
Sbjct: 15 KILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQEKF 74
Query: 75 RPLWRHYFNNTDGLV 89
R L YF + G++
Sbjct: 75 RTLTSSYFRGSQGII 89
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.331 0.146 0.467
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,760,551
Number of extensions: 107302
Number of successful extensions: 390
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 397
Number of HSP's successfully gapped: 24
Length of query: 124
Length of database: 11,106,569
Length adjustment: 86
Effective length of query: 38
Effective length of database: 8,748,793
Effective search space: 332454134
Effective search space used: 332454134
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 105 (45.1 bits)