Os02g0687200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF581 family protein.
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Os02g0687200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF581 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 323.66 | 0.845 | 6.07 | 0.6 | 1.11 | 2.7 | 0.0501 | 3.25 | -0.48 | 5.65 | 1.171 | 14345 | -- | -- |
| 336.1 | 0.854 | 6.17 | -0.19 | 1.1 | 2.43 | 0.655 | -- | -0.688 | 5.74 | 1.54 | 14345 | -- | -- |
| 323.65 | 0.838 | 6.07 | 0.598 | 1.11 | 2.69 | -- | 3.23 | -0.48 | 5.63 | 1.17 | 14350 | -- | -- |
| 334.6 | 0.852 | 6.17 | -0.146 | 1.11 | 2.34 | -- | -- | -0.703 | 5.55 | 1.539 | 14362 | -- | -- |
| 386.34 | 0.915 | 6.09 | 0.619 | -- | 2.71 | -- | 3.24 | -0.478 | -- | 1.19 | 14377 | -- | -- |
| 467.4 | 1.01 | 6.01 | 0.679 | 1.15 | -- | 0.603 | -- | 0.0437 | 4.97 | -- | -- | -- | -- |
| 468.2 | 1.01 | 6.01 | 0.679 | 1.16 | -- | -- | -- | 0.041 | 5.12 | -- | -- | -- | -- |
| 398.19 | 0.929 | 6.2 | -0.138 | -- | 2.38 | -- | -- | -0.712 | -- | 1.54 | 14391 | -- | -- |
| 335.02 | 0.852 | 6.18 | -- | 1.1 | 2.29 | -- | -- | -0.696 | 5.46 | 1.539 | 14385 | -- | -- |
| 538.65 | 1.08 | 6.03 | 0.72 | -- | -- | -- | -- | 0.0704 | -- | -- | -- | -- | -- |
| 480.34 | 1.03 | 6.03 | -- | 1.17 | -- | -- | -- | -0.0346 | 5.1 | -- | -- | -- | -- |
| 394.84 | 0.925 | 6.21 | -- | -- | 2.4 | -- | -- | -0.716 | -- | 1.52 | 15845 | -- | -- |
| 552.33 | 1.1 | 6.04 | -- | -- | -- | -- | -- | -0.00951 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 312.86 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 4 | 313.55 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 5 | 314.01 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 7 | 2 |
| 6 | 314.35 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 3 |
| 13 | 315.42 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 16 | 315.72 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 17 | 315.75 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 18 | 315.81 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 19 | 315.88 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 20 | 315.88 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 3 |
| 21 | 315.89 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 7 | 11 |
| 25 | 316.04 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 3 |
| 26 | 316.04 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 9 | 8 |
| 39 | 316.50 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 43 | 316.58 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 54 | 316.97 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 63 | 317.24 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 73 | 317.51 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 88 | 317.62 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 6 | 15 |
| 93 | 317.69 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 95 | 317.70 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 98 | 317.82 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 127 | 318.33 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 15 |
| 131 | 318.39 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 159 | 318.83 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 6 | 11 |
| 160 | 318.85 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 165 | 318.90 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 168 | 318.94 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 169 | 318.97 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 170 | 318.97 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 195 | 319.22 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 6 | 8 |
| 197 | 319.23 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 213 | 319.42 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 15 | 6 |
| 220 | 319.47 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 11 | 10 |
| 221 | 319.47 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 244 | 319.66 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 250 | 319.70 | humidity | 90.0 | 43200 | < th | dose independent | sin | 22 | NA |
| 255 | 319.73 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 267 | 319.83 | humidity | 80.0 | 43200 | > th | dose dependent | sin | 23 | NA |
| 269 | 319.84 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 8 |
| 273 | 319.87 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 275 | 319.91 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 279 | 319.96 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 285 | 320.02 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 22 |
| 307 | 320.21 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 316 | 320.29 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 20 |
| 323 | 320.34 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 350 | 320.54 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 360 | 320.61 | humidity | 90.0 | 43200 | > th | dose independent | sin | 22 | NA |
| 368 | 320.66 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 372 | 320.66 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 374 | 320.67 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 16 |
| 380 | 320.73 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 384 | 320.74 | atmosphere | 1005.0 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 389 | 320.76 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 412 | 320.93 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 2 | 12 |
| 422 | 320.96 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 432 | 320.99 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 16 | 16 |
| 459 | 321.10 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 462 | 321.10 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 11 | 12 |
| 501 | 321.22 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 555 | 321.40 | radiation | 1.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 606 | 321.59 | radiation | 1.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 618 | 321.63 | atmosphere | 1005.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 655 | 321.77 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 14 | 4 |
| 689 | 321.93 | atmosphere | 1005.0 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 707 | 322.01 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 719 | 322.07 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 724 | 322.10 | atmosphere | 1010.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 740 | 322.18 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 4 |
| 742 | 322.18 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 4 |
| 761 | 322.21 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 18 | 10 |
| 769 | 322.23 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 846 | 322.43 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 865 | 322.49 | atmosphere | 1005.0 | 43200 | > th | dose dependent | sin | 10 | NA |
| 896 | 322.61 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 14 | 19 |
| 932 | 322.70 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 9 |
| 980 | 322.81 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 3 |