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Os02g0686700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF581 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.79 (0.0701) R2 : 0.407
β1 : -3.46 (0.454) R2dD : 0.536 R2D : -0.423
β2 : -- (--) R2dC : -- R2C : --
β3 : 3.3 (0.23) R2dE : 0.761 R2E : 0.152
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -9.6 (1.75) R2dD*E : 0.301 R2D*E : -0.567
γ1 : -0.409 (0.138) R2dN8 : 0.0284 R2N8 : -0.0756
σ : 0.886
deviance : 361.8
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 25.98
memory length : 1203
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
358.43 0.89 6.8 -3.52 0.0518 3.27 1.13 -9.66 -0.46 4.39 25.79 1221 -- --
382.72 0.911 6.49 -1.18 0.0276 2.33 1.39 -- 0.163 6.22 26.3 1172 -- --
361.56 0.886 6.79 -3.49 0.067 3.3 -- -9.78 -0.408 4.2 26.05 1201 -- --
384.75 0.914 6.5 -1.16 0.0558 2.3 -- -- 0.164 5.35 26.4 1188 -- --
361.8 0.886 6.79 -3.46 -- 3.3 -- -9.6 -0.409 -- 25.98 1203 -- --
579.94 1.13 6.48 -0.441 0.5 -- 0.774 -- 0.245 1.51 -- -- -- --
582.09 1.13 6.48 -0.466 0.501 -- -- -- 0.242 0.976 -- -- -- --
384.89 0.914 6.5 -1.15 -- 2.29 -- -- 0.166 -- 26.4 1199 -- --
417.1 0.951 6.47 -- 0.0993 2 -- -- 0.299 4.17 26.7 1190 -- --
597.69 1.14 6.47 -0.447 -- -- -- -- 0.251 -- -- -- -- --
587.81 1.13 6.47 -- 0.493 -- -- -- 0.294 0.936 -- -- -- --
417.3 0.951 6.45 -- -- 2.07 -- -- 0.33 -- 26.81 1188 -- --
602.96 1.15 6.46 -- -- -- -- -- 0.301 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 364.12 wind 7 43200 < th dose dependent rect. 11 1
3 365.66 wind 1 43200 > th dose dependent rect. 11 1
4 366.06 radiation 20 14400 > th dose dependent rect. 16 15
5 366.88 humidity 70 14400 < th dose independent rect. 18 13
6 367.22 humidity 70 14400 < th dose independent rect. 18 4
20 369.84 radiation 1 1440 < th dose dependent rect. 18 23
25 372.08 temperature 25 1440 > th dose dependent rect. 16 1
27 372.85 temperature 25 1440 > th dose dependent rect. 13 10
28 372.93 temperature 25 1440 > th dose dependent rect. 11 12
30 372.97 temperature 25 1440 > th dose dependent rect. 13 19
37 373.21 temperature 25 1440 > th dose dependent rect. 11 21
68 374.07 temperature 25 1440 > th dose dependent sin 17 NA
69 374.12 radiation 20 14400 > th dose dependent rect. 16 1
99 374.56 wind 3 43200 > th dose dependent rect. 3 12
119 375.17 wind 5 43200 < th dose independent rect. 3 13
140 375.85 wind 3 43200 > th dose dependent rect. 24 16
154 376.39 radiation 30 14400 > th dose independent rect. 16 16
155 376.57 wind 5 43200 > th dose independent rect. 4 12
175 377.45 humidity 70 14400 > th dose independent rect. 19 13
176 377.47 wind 3 43200 < th dose independent rect. 3 1
204 378.35 wind 3 43200 > th dose dependent sin 3 NA
218 378.80 temperature 25 1440 > th dose dependent rect. 6 17
234 379.08 radiation 20 14400 < th dose independent rect. 16 15
271 379.39 wind 9 43200 < th dose dependent rect. 3 11
278 379.48 temperature 25 1440 > th dose dependent no NA NA
283 379.53 wind 3 43200 > th dose independent rect. 3 1
296 379.76 temperature 25 1440 > th dose dependent rect. 20 23
301 379.82 wind 5 43200 < th dose independent rect. 11 2
306 379.89 radiation 30 14400 < th dose independent rect. 15 17
307 379.92 wind 5 43200 < th dose independent rect. 9 5
313 379.97 wind 5 43200 < th dose independent sin 2 NA
328 380.15 wind 5 43200 > th dose independent rect. 11 2
339 380.32 radiation 1 1440 < th dose dependent rect. 18 10
354 380.59 radiation 1 1440 < th dose dependent rect. 18 7
359 380.67 humidity 70 14400 > th dose independent rect. 18 10
361 380.68 humidity 70 14400 > th dose independent rect. 18 7
382 380.83 wind 5 43200 > th dose independent rect. 9 5
394 380.96 wind 5 43200 > th dose independent sin 2 NA
395 380.97 wind 5 43200 > th dose independent rect. 8 7
467 382.11 radiation 1 1440 < th dose dependent rect. 18 1
484 382.50 wind 9 43200 < th dose dependent rect. 24 14
517 383.04 wind 7 43200 > th dose independent rect. 20 20
540 383.46 radiation 20 4320 < th dose independent rect. 7 1
548 383.62 radiation 20 14400 < th dose independent rect. 16 12
552 383.66 radiation 20 14400 < th dose independent rect. 16 9
559 383.73 radiation 20 14400 < th dose independent rect. 16 2
580 383.98 wind 7 43200 < th dose independent rect. 20 20
597 384.25 radiation 30 14400 > th dose independent rect. 7 1
613 384.25 radiation 1 1440 < th dose independent rect. 18 23
655 384.88 humidity 90 43200 > th dose dependent rect. 20 2
670 385.13 radiation 1 4320 < th dose independent rect. 18 11
690 385.51 radiation 1 1440 > th dose independent rect. 18 23
703 385.70 humidity 90 43200 < th dose independent rect. 20 2
708 385.77 humidity 90 43200 > th dose independent rect. 21 1
721 385.98 radiation 1 4320 < th dose independent rect. 18 7
724 386.04 radiation 1 1440 < th dose dependent rect. 7 23
736 386.24 humidity 70 14400 < th dose dependent rect. 17 14
738 386.30 humidity 70 14400 < th dose dependent rect. 18 1
759 386.52 humidity 70 14400 < th dose dependent rect. 17 5
797 386.92 radiation 1 4320 < th dose independent rect. 18 1
848 387.64 radiation 1 1440 > th dose dependent rect. 18 12
851 387.71 radiation 1 4320 > th dose independent rect. 18 11
880 388.07 wind 3 43200 > th dose dependent rect. 5 2
882 388.07 radiation 1 1440 < th dose dependent rect. 5 23
883 388.11 radiation 1 1440 > th dose independent rect. 7 23
884 388.11 radiation 1 1440 < th dose dependent rect. 5 20
895 388.19 radiation 1 14400 < th dose dependent rect. 18 7
896 388.20 radiation 30 14400 < th dose dependent rect. 18 11
899 388.22 radiation 1 14400 < th dose dependent rect. 18 10
903 388.24 wind 9 43200 < th dose dependent sin 5 NA
904 388.25 radiation 1 1440 < th dose dependent rect. 10 22
913 388.31 radiation 1 4320 > th dose independent rect. 18 1
931 388.38 radiation 1 14400 < th dose dependent rect. 18 1
959 388.52 radiation 1 1440 < th dose dependent rect. 22 21
967 388.58 radiation 1 1440 < th dose dependent rect. 5 14
983 388.70 radiation 1 1440 < th dose dependent rect. 2 23
984 388.71 wind 3 43200 > th dose independent rect. 3 7