Os02g0668500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cellular retinaldehyde-binding/triple function, C-terminal domain containing protein.
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Os02g0668500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cellular retinaldehyde-binding/triple function, C-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 268.72 | 0.77 | 12.3 | -0.571 | 3.16 | -2.92 | 2.11 | 7.41 | 0.303 | 22.9 | 24.94 | 10 | -- | -- |
| 290 | 0.799 | 12.4 | -1.43 | 3.2 | -2.31 | 1.39 | -- | 0.149 | 22.9 | 23.87 | 8 | -- | -- |
| 286.38 | 0.788 | 12.3 | -0.636 | 3.12 | -3 | -- | 7.17 | 0.262 | 22.9 | 25.2 | 11 | -- | -- |
| 297.92 | 0.804 | 12.4 | -1.46 | 3.19 | -2.32 | -- | -- | 0.164 | 22.9 | 23.73 | 8 | -- | -- |
| 815.82 | 1.34 | 12.1 | -0.19 | -- | -4.73 | -- | 7.55 | 0.646 | -- | 24.01 | 3 | -- | -- |
| 369.83 | 0.902 | 12.4 | -1.8 | 3.77 | -- | 1.63 | -- | -0.136 | 23.7 | -- | -- | -- | -- |
| 381.38 | 0.915 | 12.4 | -1.87 | 3.76 | -- | -- | -- | -0.143 | 23.7 | -- | -- | -- | -- |
| 842.65 | 1.36 | 12.2 | -1.05 | -- | -4.21 | -- | -- | 0.481 | -- | 22.88 | 3 | -- | -- |
| 350.68 | 0.872 | 12.3 | -- | 3.09 | -2.72 | -- | -- | 0.405 | 22.7 | 23.2 | 9 | -- | -- |
| 1270.32 | 1.67 | 12.3 | -1.76 | -- | -- | -- | -- | -0.0965 | -- | -- | -- | -- | -- |
| 473.32 | 1.02 | 12.4 | -- | 3.74 | -- | -- | -- | 0.0654 | 23.7 | -- | -- | -- | -- |
| 866.24 | 1.37 | 12.2 | -- | -- | -4.37 | -- | -- | 0.675 | -- | 22.04 | 2 | -- | -- |
| 1351.94 | 1.72 | 12.3 | -- | -- | -- | -- | -- | 0.0986 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 266.52 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 2 | 266.70 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 18 |
| 9 | 268.44 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 21 |
| 17 | 268.74 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 21 | 268.95 | temperature | 25 | 10 | > th | dose dependent | rect. | 22 | 23 |
| 34 | 269.40 | temperature | 25 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 35 | 269.53 | temperature | 25 | 10 | > th | dose dependent | rect. | 20 | 23 |
| 44 | 270.06 | temperature | 25 | 10 | > th | dose dependent | sin | 23 | NA |
| 102 | 272.06 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 348 | 283.11 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 443 | 289.94 | temperature | 25 | 270 | > th | dose dependent | sin | 5 | NA |
| 479 | 292.12 | wind | 1 | 43200 | < th | dose dependent | rect. | 18 | 10 |
| 482 | 292.17 | radiation | 10 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 483 | 292.22 | radiation | 10 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 485 | 292.23 | radiation | 10 | 43200 | < th | dose independent | rect. | 24 | 8 |
| 489 | 292.26 | radiation | 10 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 495 | 292.37 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 18 |
| 500 | 292.39 | radiation | 40 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 504 | 292.48 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 13 |
| 505 | 292.50 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 11 |
| 508 | 292.51 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 513 | 292.53 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 16 |
| 518 | 292.57 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 9 |
| 529 | 292.91 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 594 | 294.62 | radiation | 1 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 599 | 294.75 | radiation | 10 | 43200 | < th | dose independent | sin | 10 | NA |
| 604 | 294.95 | radiation | 40 | 43200 | < th | dose independent | sin | 11 | NA |
| 633 | 295.37 | radiation | 1 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 676 | 296.14 | radiation | 10 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 685 | 296.16 | radiation | 40 | 43200 | > th | dose dependent | rect. | 15 | 20 |
| 690 | 296.23 | radiation | 10 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 692 | 296.25 | radiation | 40 | 43200 | > th | dose dependent | rect. | 7 | 4 |
| 715 | 296.34 | radiation | 20 | 43200 | < th | dose independent | rect. | 15 | 12 |
| 716 | 296.35 | radiation | 20 | 43200 | < th | dose independent | rect. | 15 | 10 |
| 719 | 296.36 | radiation | 20 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 742 | 296.66 | radiation | 40 | 43200 | < th | dose independent | rect. | 24 | 11 |
| 746 | 296.68 | radiation | 40 | 43200 | < th | dose independent | rect. | 7 | 4 |
| 785 | 297.12 | radiation | 40 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 827 | 297.62 | radiation | 40 | 43200 | < th | dose dependent | rect. | 21 | 10 |
| 863 | 297.78 | radiation | 30 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 869 | 297.80 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 9 |
| 879 | 297.83 | radiation | 30 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 916 | 298.12 | radiation | 40 | 43200 | > th | dose dependent | sin | 11 | NA |
| 933 | 298.43 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 938 | 298.54 | radiation | 30 | 43200 | > th | dose dependent | rect. | 14 | 18 |
| 941 | 298.59 | radiation | 40 | 43200 | < th | dose dependent | rect. | 5 | 1 |