BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0668500 Os02g0668500|AK071867
         (211 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G35750.1  | chr4:16940865-16941674 REVERSE LENGTH=203          187   2e-48
AT3G10210.1  | chr3:3160416-3161579 REVERSE LENGTH=238            131   3e-31

>AT4G35750.1 | chr4:16940865-16941674 REVERSE LENGTH=203
          Length = 202

 Score =  187 bits (476), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 91/198 (45%), Positives = 128/198 (64%), Gaps = 4/198 (2%)

Query: 14  EAELLLERSRAITLNGRDKRGRALVRIVGKYFPXXXXXXXXXXXXXXYVRRRVLPEIGER 73
           E E L+E+     ++GRDKRGR ++RI+GK+FP              Y+  ++ P +G +
Sbjct: 9   EQEQLIEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKK---YLEEKIFPRLGRK 65

Query: 74  EFVVVYVHSLVDRGDNFPGVXXXXXXXXXXXXXXKERLRAVYFVHPGFQARLFFATLGRF 133
            F V+YVH+ V R +NFPG+              ++ L+ VYF+HPG Q+RLF AT GRF
Sbjct: 66  PFAVLYVHTGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFLATCGRF 125

Query: 134 LFSSGLYEKLRYMSRLEYLWEHVSKGEMEVPECARRHDEELERRPLMDYGIEATDRRCMF 193
           LFS GLY KLRY+SR++YLWEHV + E+E+PE    HD++LE RP+MDYG E+   R +F
Sbjct: 126 LFSGGLYGKLRYISRVDYLWEHVRRNEIEMPEFVYDHDDDLEYRPMMDYGQESDHAR-VF 184

Query: 194 DAASMDTSASLHSLRCIS 211
             A++D+S S  S+RCIS
Sbjct: 185 AGAAVDSSVSSFSMRCIS 202



>AT3G10210.1 | chr3:3160416-3161579 REVERSE LENGTH=238
          Length = 237

 Score =  131 bits (329), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 104/178 (58%), Gaps = 7/178 (3%)

Query: 9   DDAMAEAELLLERSRAITLNGRDKRGRALVRIVGKYFPXXXXXXXXXXXXXXYVRRRVLP 68
           D+  ++ +LL    +  TL G D+ G  + RIVGKYFP              Y+ +++  
Sbjct: 43  DEDFSDLDLL----QFFTLQGLDRSGNRIFRIVGKYFPARVVSAERLKK---YISQKISN 95

Query: 69  EIGEREFVVVYVHSLVDRGDNFPGVXXXXXXXXXXXXXXKERLRAVYFVHPGFQARLFFA 128
           +  E    +VY+HS V + DN PG+              K+RL+ VYF+HPG ++RL  A
Sbjct: 96  QCPEGPLCLVYMHSTVQKDDNSPGITILRWIYEDLPSDIKDRLQLVYFIHPGLRSRLVIA 155

Query: 129 TLGRFLFSSGLYEKLRYMSRLEYLWEHVSKGEMEVPECARRHDEELERRPLMDYGIEA 186
           TLGR L S GLY K++Y+SRL+YLWE + KGE+E+P+  + HD  LE RPL DYGIE 
Sbjct: 156 TLGRLLLSGGLYWKIKYVSRLQYLWEDIKKGEVEIPDFVKNHDNVLEHRPLTDYGIEP 213



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.326    0.141    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,844,917
Number of extensions: 131517
Number of successful extensions: 293
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 291
Number of HSP's successfully gapped: 2
Length of query: 211
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 117
Effective length of database: 8,529,465
Effective search space: 997947405
Effective search space used: 997947405
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 109 (46.6 bits)