Os02g0649800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytochrome B5 homolog (Fragment).
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Os02g0649800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytochrome B5 homolog (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.23 | 0.346 | 13.3 | 0.252 | 0.39 | -1.55 | 0.051 | -0.524 | 0.632 | 2.26 | 0.2965 | 1356 | -- | -- |
| 54.33 | 0.343 | 13.3 | 0.21 | 0.387 | -1.45 | 0.135 | -- | 0.631 | 2.36 | 0.2807 | 1348 | -- | -- |
| 54.22 | 0.343 | 13.3 | 0.252 | 0.385 | -1.57 | -- | -0.583 | 0.631 | 2.37 | 0.2717 | 1353 | -- | -- |
| 54.38 | 0.343 | 13.3 | 0.209 | 0.389 | -1.45 | -- | -- | 0.626 | 2.31 | 0.2803 | 1348 | -- | -- |
| 61.31 | 0.365 | 13.3 | 0.284 | -- | -1.91 | -- | -1.17 | 0.632 | -- | 0.2734 | 1334 | -- | -- |
| 73.73 | 0.403 | 13.3 | 0.569 | 0.619 | -- | 0.249 | -- | 0.775 | 0.785 | -- | -- | -- | -- |
| 74 | 0.403 | 13.3 | 0.56 | 0.618 | -- | -- | -- | 0.773 | 0.791 | -- | -- | -- | -- |
| 62.14 | 0.367 | 13.3 | 0.19 | -- | -1.69 | -- | -- | 0.619 | -- | 0.2995 | 1320 | -- | -- |
| 55.4 | 0.347 | 13.3 | -- | 0.395 | -1.52 | -- | -- | 0.624 | 2.34 | 0.2597 | 1353 | -- | -- |
| 97.89 | 0.462 | 13.2 | 0.582 | -- | -- | -- | -- | 0.785 | -- | -- | -- | -- | -- |
| 82.25 | 0.424 | 13.3 | -- | 0.627 | -- | -- | -- | 0.711 | 0.832 | -- | -- | -- | -- |
| 62.94 | 0.37 | 13.3 | -- | -- | -1.78 | -- | -- | 0.592 | -- | 0.26 | 1327 | -- | -- |
| 106.83 | 0.482 | 13.3 | -- | -- | -- | -- | -- | 0.72 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.83 | humidity | 60 | 43200 | < th | dose independent | rect. | 23 | 13 |
| 2 | 53.83 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 20 |
| 8 | 53.90 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 3 |
| 9 | 53.90 | humidity | 60 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 11 | 53.91 | humidity | 60 | 43200 | < th | dose dependent | rect. | 9 | 6 |
| 12 | 53.92 | humidity | 60 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 19 | 53.96 | humidity | 60 | 43200 | < th | dose dependent | rect. | 4 | 11 |
| 26 | 53.98 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 31 | 54.01 | humidity | 60 | 43200 | < th | dose independent | rect. | 19 | 17 |
| 36 | 54.02 | humidity | 60 | 43200 | < th | dose dependent | rect. | 18 | 21 |
| 39 | 54.03 | humidity | 60 | 43200 | < th | dose dependent | sin | 5 | NA |
| 54 | 54.07 | wind | 7 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 85 | 54.23 | humidity | 60 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 88 | 54.26 | wind | 7 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 95 | 54.31 | humidity | 70 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 96 | 54.32 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 99 | 54.34 | radiation | 30 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 105 | 54.35 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 122 | 54.44 | wind | 5 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 170 | 54.69 | humidity | 60 | 43200 | > th | dose independent | rect. | 3 | 8 |
| 188 | 54.74 | humidity | 50 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 214 | 54.79 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 280 | 54.85 | radiation | 10 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 329 | 54.89 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 346 | 54.91 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 6 |
| 350 | 54.93 | radiation | 30 | 43200 | < th | dose independent | sin | 23 | NA |
| 373 | 54.94 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 379 | 54.94 | radiation | 30 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 451 | 54.97 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 10 |
| 503 | 54.99 | radiation | 30 | 43200 | < th | dose independent | no | NA | NA |
| 525 | 54.99 | humidity | 60 | 43200 | > th | dose independent | rect. | 19 | 17 |
| 589 | 54.99 | radiation | 30 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 601 | 54.99 | humidity | 60 | 43200 | < th | dose dependent | rect. | 14 | 23 |
| 611 | 55.00 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 15 |
| 624 | 55.01 | radiation | 20 | 43200 | > th | dose dependent | rect. | 9 | 7 |
| 676 | 55.03 | humidity | 60 | 43200 | < th | dose dependent | rect. | 4 | 16 |
| 682 | 55.03 | humidity | 60 | 43200 | < th | dose dependent | rect. | 9 | 22 |
| 863 | 55.05 | humidity | 60 | 43200 | < th | dose dependent | rect. | 8 | 12 |
| 995 | 55.08 | radiation | 20 | 43200 | > th | dose dependent | sin | 23 | NA |