BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0649800 Os02g0649800|AK066861
(138 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G53560.1 | chr5:21759628-21760353 FORWARD LENGTH=135 152 5e-38
AT5G48810.1 | chr5:19789249-19790180 REVERSE LENGTH=141 138 1e-33
AT2G32720.1 | chr2:13877013-13878447 REVERSE LENGTH=135 130 2e-31
AT1G26340.1 | chr1:9113992-9114755 FORWARD LENGTH=136 123 3e-29
AT2G46650.1 | chr2:19151807-19152394 FORWARD LENGTH=133 122 5e-29
AT1G37130.1 | chr1:14158617-14161652 FORWARD LENGTH=918 72 1e-13
AT1G77760.1 | chr1:29236005-29239367 REVERSE LENGTH=918 71 2e-13
AT1G60660.1 | chr1:22342589-22342954 REVERSE LENGTH=122 69 7e-13
AT5G09680.1 | chr5:2999362-3000185 REVERSE LENGTH=212 58 1e-09
AT3G61580.1 | chr3:22786253-22787602 FORWARD LENGTH=450 57 4e-09
AT2G46210.1 | chr2:18977542-18978891 FORWARD LENGTH=450 54 2e-08
>AT5G53560.1 | chr5:21759628-21760353 FORWARD LENGTH=135
Length = 134
Score = 152 bits (384), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 70/134 (52%), Positives = 96/134 (71%), Gaps = 2/134 (1%)
Query: 1 MAGGKAVYSFQEVSKHNDRKDCWLIIAGKVYDVSPFMEEHPGGDEVLLACTGKDATADFN 60
M+ + V SF+EVSKHN KDCWLII+GKVYDV+PFM++HPGGDEVLL+ TGKDAT DF
Sbjct: 1 MSSDRKVLSFEEVSKHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFE 60
Query: 61 DIGHTATAKELMPQYCIGEVDASTVPAKPAYRVVSEDASAKPDAASQGAWLTALQLAVPV 120
D+GH+ TA+++M +Y IGE+D+S+VPA Y V+ A + + LQ VP+
Sbjct: 61 DVGHSDTARDMMDKYFIGEIDSSSVPATRTY--VAPQQPAYNQDKTPEFIIKILQFLVPI 118
Query: 121 VLLGLAYALQDFAK 134
++LGLA ++ + K
Sbjct: 119 LILGLALVVRHYTK 132
>AT5G48810.1 | chr5:19789249-19790180 REVERSE LENGTH=141
Length = 140
Score = 138 bits (347), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 92/136 (67%)
Query: 1 MAGGKAVYSFQEVSKHNDRKDCWLIIAGKVYDVSPFMEEHPGGDEVLLACTGKDATADFN 60
M G V++ EVS+H+ KDCW++I GKVYDV+ F+++HPGGDEV+L TGKDAT DF
Sbjct: 1 MGGDGKVFTLSEVSQHSSAKDCWIVIDGKVYDVTKFLDDHPGGDEVILTSTGKDATDDFE 60
Query: 61 DIGHTATAKELMPQYCIGEVDASTVPAKPAYRVVSEDASAKPDAASQGAWLTALQLAVPV 120
D+GH++TAK ++ +Y +G++D +TVP K + + + S + LQ VP+
Sbjct: 61 DVGHSSTAKAMLDEYYVGDIDTATVPVKAKFVPPTSTKAVATQDKSSDFVIKLLQFLVPL 120
Query: 121 VLLGLAYALQDFAKTK 136
++LGLA+ ++ + KTK
Sbjct: 121 LILGLAFGIRYYTKTK 136
>AT2G32720.1 | chr2:13877013-13878447 REVERSE LENGTH=135
Length = 134
Score = 130 bits (327), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 89/135 (65%), Gaps = 2/135 (1%)
Query: 1 MAGGKAVYSFQEVSKHNDRKDCWLIIAGKVYDVSPFMEEHPGGDEVLLACTGKDATADFN 60
M +++ EVS+HN DCW++I GKVY+V+ F+E+HPGGD+VLL+ TGKDAT DF
Sbjct: 1 MGDEAKIFTLSEVSEHNQAHDCWIVINGKVYNVTKFLEDHPGGDDVLLSSTGKDATDDFE 60
Query: 61 DIGHTATAKELMPQYCIGEVDASTVPAKPAYRVVSEDASAKPDAASQGAWLTALQLAVPV 120
D+GH+ +A+E+M QY +GE+D +T+P K Y + D S+ + LQ VP+
Sbjct: 61 DVGHSESAREMMEQYYVGEIDPTTIPKKVKY-TPPKQPHYNQDKTSE-FIIKLLQFLVPL 118
Query: 121 VLLGLAYALQDFAKT 135
+LGLA ++ + K+
Sbjct: 119 AILGLAVGIRIYTKS 133
>AT1G26340.1 | chr1:9113992-9114755 FORWARD LENGTH=136
Length = 135
Score = 123 bits (308), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 86/132 (65%), Gaps = 4/132 (3%)
Query: 7 VYSFQEVSKHNDRKDCWLIIAGKVYDVSPFMEEHPGGDEVLLACTGKDATADFNDIGHTA 66
+YS +E + HN + DCW++I GKVYDVS +M+EHPGGD+VLLA GKDAT DF D GH+
Sbjct: 7 LYSMEEAATHNKQDDCWVVIDGKVYDVSSYMDEHPGGDDVLLAVAGKDATDDFEDAGHSK 66
Query: 67 TAKELMPQYCIGEVDASTVPAKPAYRVVSEDASAKPDAASQGAW-LTALQLAVPVVLLGL 125
A+ELM +Y IGE+D S++P P ++ +D +P + Q + LT VPV ++ +
Sbjct: 67 DARELMEKYFIGELDESSLPEIPELKIYKKD---QPQDSVQKLFDLTKQYWVVPVSIITI 123
Query: 126 AYALQDFAKTKT 137
+ A+ KT
Sbjct: 124 SVAVSVLFSRKT 135
>AT2G46650.1 | chr2:19151807-19152394 FORWARD LENGTH=133
Length = 132
Score = 122 bits (307), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 83/122 (68%)
Query: 9 SFQEVSKHNDRKDCWLIIAGKVYDVSPFMEEHPGGDEVLLACTGKDATADFNDIGHTATA 68
SF +V+KH + DCW++I GKVYD+S FM+EHPGGD VLLA TGKDA+ DF D+ H+ A
Sbjct: 6 SFHDVAKHKCKNDCWILIHGKVYDISTFMDEHPGGDNVLLAVTGKDASIDFEDVNHSKDA 65
Query: 69 KELMPQYCIGEVDASTVPAKPAYRVVSEDASAKPDAASQGAWLTALQLAVPVVLLGLAYA 128
KELM +YCIG+VD STVP Y E S + + + L +P+++LG+A+A
Sbjct: 66 KELMKKYCIGDVDQSTVPVTQQYIPPWEKESTAAETTKEESGKKLLIYLIPLLILGVAFA 125
Query: 129 LQ 130
L+
Sbjct: 126 LR 127
>AT1G37130.1 | chr1:14158617-14161652 FORWARD LENGTH=918
Length = 917
Score = 71.6 bits (174), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 7 VYSFQEVSKHNDRKDCWLIIAGKVYDVSPFMEEHPGGDEVLLACTGKDATADFNDIGHTA 66
+YS EV KHN CW+I+ G +YD + F+ +HPGG + +L G D T +F I H+
Sbjct: 544 MYSMSEVKKHNSADSCWIIVHGHIYDCTRFLMDHPGGSDSILINAGTDCTEEFEAI-HSD 602
Query: 67 TAKELMPQYCIGEV 80
AK+++ Y IGE+
Sbjct: 603 KAKKMLEDYRIGEL 616
>AT1G77760.1 | chr1:29236005-29239367 REVERSE LENGTH=918
Length = 917
Score = 71.2 bits (173), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 1 MAGGKAVYSFQEVSKHNDRKDCWLIIAGKVYDVSPFMEEHPGGDEVLLACTGKDATADFN 60
M +YS EV KHN W+I+ G +YD + F+++HPGG + +L G D T +F
Sbjct: 541 MNTASKMYSISEVRKHNTADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFE 600
Query: 61 DIGHTATAKELMPQYCIGEVDASTVPAKPAYRV 93
I H+ AK+L+ Y IGE+ + + P V
Sbjct: 601 AI-HSDKAKKLLEDYRIGELITTGYDSSPNVSV 632
>AT1G60660.1 | chr1:22342589-22342954 REVERSE LENGTH=122
Length = 121
Score = 68.9 bits (167), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 8 YSFQEVSKHNDRKDCWLIIAGKVYDVSPFMEEHPGGDEVLLACTGKDATADFNDIGHTAT 67
YS EV+ HN R DCW+II KVYD++ ++EEHPGGD +L G D+T F H
Sbjct: 49 YSKSEVAVHNKRNDCWIIIKDKVYDITSYVEEHPGGD-AILDHAGDDSTDGFFGPQHATR 107
Query: 68 AKELMPQYCIGEV 80
+++ + IGE+
Sbjct: 108 VFDMIEDFYIGEL 120
>AT5G09680.1 | chr5:2999362-3000185 REVERSE LENGTH=212
Length = 211
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%)
Query: 4 GKAVYSFQEVSKHNDRKDCWLIIAGKVYDVSPFMEEHPGGDEVLLACTGKDATADFNDIG 63
K + EV KH W ++ G+VY++SP+M HPGG ++L+ G+D T FN
Sbjct: 125 NKRLIPMDEVKKHRTGDSMWTVLKGRVYNISPYMNFHPGGVDMLMKAVGRDGTLLFNKYH 184
Query: 64 HTATAKELMPQYCIGEVDASTV 85
L+ + +G +D + V
Sbjct: 185 AWVNVDILLEKCLVGVLDDTKV 206
>AT3G61580.1 | chr3:22786253-22787602 FORWARD LENGTH=450
Length = 449
Score = 56.6 bits (135), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 11 QEVSKHNDRKDCWLIIAGKVYDVSPFMEEHPGGDEVLLACTGKDATADF 59
+++ KHN D W+ I GKVY+VS +++ HPGGD V+L G+D T F
Sbjct: 13 EDLKKHNKSGDLWIAIQGKVYNVSDWIKTHPGGDTVILNLVGQDVTDAF 61
>AT2G46210.1 | chr2:18977542-18978891 FORWARD LENGTH=450
Length = 449
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 11 QEVSKHNDRKDCWLIIAGKVYDVSPFMEEHPGGDEVLLACTGKDATADF 59
+++ KHN D W+ I GKVYDVS +++ HPGG+ +L G+D T F
Sbjct: 13 EDLKKHNKPGDLWISIQGKVYDVSDWVKSHPGGEAAILNLAGQDVTDAF 61
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.131 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,982,632
Number of extensions: 112066
Number of successful extensions: 211
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 208
Number of HSP's successfully gapped: 11
Length of query: 138
Length of database: 11,106,569
Length adjustment: 88
Effective length of query: 50
Effective length of database: 8,693,961
Effective search space: 434698050
Effective search space used: 434698050
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 106 (45.4 bits)