Os02g0640700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UBX domain containing protein.
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Os02g0640700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UBX domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 548.7 | 1.1 | 5.06 | -0.99 | 3.19 | 2.81 | 1.82 | -1.3 | -0.753 | 1.73 | 22.48 | 2648 | -- | -- |
| 549.53 | 1.09 | 5.03 | -0.679 | 3.21 | 2.78 | 1.83 | -- | -0.713 | 1.68 | 21.86 | 2675 | -- | -- |
| 561.13 | 1.1 | 5.04 | -0.967 | 3.17 | 2.8 | -- | -1.14 | -0.671 | 1.66 | 23.23 | 2649 | -- | -- |
| 561.39 | 1.1 | 5.03 | -0.676 | 3.2 | 2.75 | -- | -- | -0.688 | 1.64 | 22.08 | 2656 | -- | -- |
| 1135.41 | 1.57 | 5.09 | -1.61 | -- | 3.9 | -- | -3.07 | -0.768 | -- | 23.9 | 2536 | -- | -- |
| 803.89 | 1.33 | 4.89 | 0.421 | 3.6 | -- | 2.11 | -- | -0.0957 | 1.69 | -- | -- | -- | -- |
| 821.35 | 1.34 | 4.9 | 0.354 | 3.6 | -- | -- | -- | -0.107 | 1.62 | -- | -- | -- | -- |
| 1091.43 | 1.54 | 4.99 | -0.706 | -- | 4.01 | -- | -- | -0.624 | -- | 23.9 | 1088 | -- | -- |
| 571.39 | 1.11 | 4.98 | -- | 3.2 | 2.54 | -- | -- | -0.513 | 1.69 | 23.03 | 2634 | -- | -- |
| 1611.69 | 1.88 | 4.85 | 0.499 | -- | -- | -- | -- | -0.0274 | -- | -- | -- | -- | -- |
| 824.66 | 1.34 | 4.91 | -- | 3.6 | -- | -- | -- | -0.146 | 1.62 | -- | -- | -- | -- |
| 1103.63 | 1.55 | 4.96 | -- | -- | 3.84 | -- | -- | -0.519 | -- | 23.97 | 1091 | -- | -- |
| 1618.27 | 1.88 | 4.87 | -- | -- | -- | -- | -- | -0.0828 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 537.94 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 2 | 538.38 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 3 | 539.14 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 10 |
| 7 | 539.85 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 11 | 540.55 | radiation | 20 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 19 | 544.39 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 33 | 549.19 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 58 | 553.79 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 77 | 555.32 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 3 |
| 80 | 555.47 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 152 | 560.22 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 201 | 561.80 | radiation | 40 | 4320 | < th | dose dependent | rect. | 17 | 4 |
| 212 | 562.27 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 222 | 562.60 | temperature | 20 | 4320 | > th | dose dependent | rect. | 5 | 18 |
| 226 | 562.66 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 3 |
| 242 | 562.97 | temperature | 20 | 4320 | > th | dose dependent | rect. | 16 | 19 |
| 281 | 563.54 | temperature | 20 | 4320 | > th | dose dependent | sin | 17 | NA |
| 354 | 564.28 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 9 |
| 369 | 564.43 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 425 | 564.95 | wind | 5 | 43200 | > th | dose dependent | rect. | 4 | 11 |
| 436 | 565.05 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 437 | 565.09 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 452 | 565.25 | temperature | 20 | 4320 | > th | dose dependent | rect. | 10 | 23 |
| 463 | 565.34 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 473 | 565.42 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 23 |
| 481 | 565.48 | temperature | 20 | 1440 | > th | dose dependent | sin | 5 | NA |
| 523 | 565.81 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 544 | 566.02 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 557 | 566.13 | temperature | 15 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 678 | 567.15 | temperature | 30 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 713 | 567.50 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 5 |
| 761 | 567.84 | radiation | 20 | 4320 | > th | dose dependent | rect. | 15 | 17 |
| 852 | 568.46 | wind | 3 | 43200 | > th | dose dependent | rect. | 9 | 3 |
| 905 | 568.71 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 927 | 568.85 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 1 |