Os02g0621600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0621600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.93 | 0.342 | 10.7 | 1.13 | 0.281 | -0.916 | -0.693 | -0.628 | 0.575 | 21.7 | 0.2546 | 40 | -- | -- |
| 53.3 | 0.34 | 10.7 | 1.07 | 0.311 | -0.953 | -1.4 | -- | 0.565 | 22.2 | 0.08161 | 39 | -- | -- |
| 53.27 | 0.34 | 10.7 | 1.15 | 0.307 | -0.946 | -- | -1.03 | 0.566 | 22.3 | 0.3255 | 44 | -- | -- |
| 60.78 | 0.363 | 10.7 | 1.15 | 0.298 | -0.933 | -- | -- | 0.566 | 21.9 | 0.2955 | 44 | -- | -- |
| 55.41 | 0.347 | 10.7 | 1.16 | -- | -0.802 | -- | -1.05 | 0.603 | -- | 0.2837 | 51 | -- | -- |
| 70.94 | 0.395 | 10.7 | 1.19 | 0.853 | -- | 1.31 | -- | 0.581 | 12.5 | -- | -- | -- | -- |
| 78.22 | 0.414 | 10.7 | 1.24 | 0.851 | -- | -- | -- | 0.588 | 12.7 | -- | -- | -- | -- |
| 62.79 | 0.369 | 10.7 | 1.18 | -- | -0.768 | -- | -- | 0.555 | -- | 0.2752 | 54 | -- | -- |
| 94.5 | 0.453 | 10.7 | -- | 0.483 | -1.09 | -- | -- | 0.502 | 22.8 | 0.00441 | 41 | -- | -- |
| 123.52 | 0.519 | 10.7 | 1.21 | -- | -- | -- | -- | 0.573 | -- | -- | -- | -- | -- |
| 118.64 | 0.51 | 10.7 | -- | 0.832 | -- | -- | -- | 0.45 | 12.6 | -- | -- | -- | -- |
| 99.02 | 0.463 | 10.7 | -- | -- | -0.75 | -- | -- | 0.521 | -- | 3.037e-06 | 57 | -- | -- |
| 162.02 | 0.594 | 10.7 | -- | -- | -- | -- | -- | 0.439 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.07 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 14 |
| 2 | 45.09 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 15 |
| 9 | 47.70 | radiation | 1.0 | 30 | < th | dose dependent | sin | 13 | NA |
| 10 | 47.79 | radiation | 1.0 | 30 | > th | dose independent | sin | 13 | NA |
| 14 | 47.92 | radiation | 10.0 | 270 | < th | dose independent | rect. | 16 | 11 |
| 17 | 48.21 | radiation | 1.0 | 30 | < th | dose independent | sin | 13 | NA |
| 20 | 48.57 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 16 | 11 |
| 24 | 48.76 | radiation | 1.0 | 90 | > th | dose independent | rect. | 14 | 17 |
| 53 | 49.86 | radiation | 1.0 | 30 | > th | dose independent | rect. | 14 | 19 |
| 76 | 50.51 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 78 | 50.55 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 83 | 50.68 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 5 | 2 |
| 89 | 50.74 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 92 | 50.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 14 |
| 93 | 50.77 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 5 |
| 94 | 50.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 97 | 50.83 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 109 | 50.95 | temperature | 30.0 | 90 | < th | dose independent | rect. | 18 | 10 |
| 111 | 50.96 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 115 | 50.96 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 116 | 50.96 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 125 | 51.13 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 136 | 51.32 | humidity | 70.0 | 10 | > th | dose independent | rect. | 18 | 11 |
| 138 | 51.34 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 157 | 51.52 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 21 |
| 170 | 51.79 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 172 | 51.80 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 173 | 51.82 | radiation | 1.0 | 90 | < th | dose independent | rect. | 13 | 15 |
| 179 | 51.86 | radiation | 1.0 | 90 | < th | dose independent | rect. | 8 | 20 |
| 182 | 51.88 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 13 | 15 |
| 193 | 51.95 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 19 |
| 199 | 52.00 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 217 | 52.19 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 10 |
| 218 | 52.19 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 10 |
| 223 | 52.23 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 21 |
| 225 | 52.25 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 19 |
| 279 | 52.69 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 12 |
| 284 | 52.71 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 14 |
| 341 | 53.06 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 2 |
| 362 | 53.17 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 371 | 53.23 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 421 | 53.50 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 2 | 20 |
| 425 | 53.52 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 22 |
| 436 | 53.58 | temperature | 30.0 | 90 | < th | dose independent | rect. | 8 | 20 |
| 506 | 53.90 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 18 | 20 |
| 531 | 54.03 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 13 | 3 |
| 557 | 54.12 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 13 | 18 |
| 572 | 54.18 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 19 |
| 575 | 54.18 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 19 |
| 613 | 54.32 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 12 | 5 |
| 620 | 54.38 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 622 | 54.39 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 19 |
| 631 | 54.42 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 10 |
| 666 | 54.59 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 5 |
| 668 | 54.59 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 5 |
| 672 | 54.61 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 673 | 54.61 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 674 | 54.61 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 676 | 54.61 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 19 |
| 700 | 54.67 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 18 | 10 |
| 702 | 54.68 | temperature | 20.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 706 | 54.69 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 714 | 54.71 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 15 | 16 |
| 726 | 54.75 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 13 |
| 735 | 54.77 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 781 | 54.86 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 782 | 54.86 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 4 |
| 784 | 54.87 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 785 | 54.87 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 799 | 54.89 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 11 |
| 802 | 54.90 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 13 | 6 |
| 815 | 54.91 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 18 | 11 |
| 843 | 54.96 | wind | 1.0 | 90 | > th | dose independent | rect. | 7 | 7 |
| 861 | 54.99 | radiation | 1.0 | 30 | < th | dose dependent | no | NA | NA |
| 878 | 55.02 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 886 | 55.04 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 887 | 55.04 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 888 | 55.04 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 889 | 55.04 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 7 |
| 890 | 55.04 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 891 | 55.04 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 896 | 55.05 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 10 |
| 899 | 55.05 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 10 |
| 903 | 55.05 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 19 | 10 |
| 905 | 55.05 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 19 | 10 |
| 906 | 55.05 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 19 | 10 |
| 918 | 55.05 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 944 | 55.10 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 948 | 55.11 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 949 | 55.11 | temperature | 10.0 | 720 | > th | dose dependent | sin | 6 | NA |
| 970 | 55.15 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 7 | 22 |