Os02g0613600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Trafficking protein particle complex protein 2 (Sedlin) (MBP-1 interacting protein-2A) (MIP-2A).
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Os02g0613600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Trafficking protein particle complex protein 2 (Sedlin) (MBP-1 interacting protein-2A) (MIP-2A).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.34 | 0.196 | 11.7 | 0.24 | 0.144 | -0.034 | 0.0572 | -2.85 | 0.136 | 20.4 | 30.02 | 4220 | -- | -- |
| 17.98 | 0.197 | 11.7 | 0.705 | 0.149 | -0.366 | 0.0625 | -- | 0.157 | 19.7 | 29.9 | 4279 | -- | -- |
| 17.35 | 0.194 | 11.7 | 0.239 | 0.144 | -0.0342 | -- | -2.84 | 0.136 | 20.4 | 30.01 | 4220 | -- | -- |
| 17.95 | 0.197 | 11.7 | 0.715 | 0.144 | -0.372 | -- | -- | 0.163 | 20.1 | 29.9 | 4254 | -- | -- |
| 18.51 | 0.2 | 11.7 | 0.242 | -- | -0.0295 | -- | -2.83 | 0.135 | -- | 30 | 4220 | -- | -- |
| 22.75 | 0.224 | 11.7 | 0.622 | 0.147 | -- | 0.0713 | -- | 0.208 | 19.5 | -- | -- | -- | -- |
| 22.76 | 0.223 | 11.7 | 0.62 | 0.147 | -- | -- | -- | 0.208 | 19.6 | -- | -- | -- | -- |
| 19.18 | 0.204 | 11.7 | 0.717 | -- | -0.37 | -- | -- | 0.159 | -- | 29.82 | 4288 | -- | -- |
| 30.78 | 0.258 | 11.7 | -- | 0.153 | -0.244 | -- | -- | 0.0838 | 20 | 30.73 | 4276 | -- | -- |
| 23.91 | 0.229 | 11.7 | 0.618 | -- | -- | -- | -- | 0.205 | -- | -- | -- | -- | -- |
| 32.9 | 0.268 | 11.7 | -- | 0.142 | -- | -- | -- | 0.139 | 19.9 | -- | -- | -- | -- |
| 31.88 | 0.263 | 11.7 | -- | -- | -0.236 | -- | -- | 0.0872 | -- | 30.7 | 4307 | -- | -- |
| 34 | 0.272 | 11.7 | -- | -- | -- | -- | -- | 0.137 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.75 | temperature | 30 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 4 | 16.75 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 7 | 16.79 | temperature | 30 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 10 | 16.80 | temperature | 30 | 4320 | > th | dose independent | rect. | 8 | 4 |
| 60 | 16.82 | temperature | 30 | 4320 | < th | dose independent | rect. | 20 | 14 |
| 92 | 16.91 | temperature | 30 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 97 | 16.94 | temperature | 30 | 4320 | > th | dose independent | sin | 8 | NA |
| 98 | 16.94 | temperature | 30 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 100 | 16.95 | temperature | 30 | 4320 | < th | dose independent | sin | 8 | NA |
| 105 | 16.97 | temperature | 30 | 4320 | > th | dose dependent | rect. | 8 | 4 |
| 127 | 16.99 | temperature | 30 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 234 | 17.14 | temperature | 30 | 4320 | > th | dose dependent | sin | 8 | NA |
| 530 | 17.37 | temperature | 30 | 4320 | > th | dose independent | no | NA | NA |
| 531 | 17.37 | temperature | 30 | 4320 | < th | dose independent | no | NA | NA |
| 761 | 17.41 | wind | 1 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 788 | 17.43 | temperature | 30 | 4320 | < th | dose independent | rect. | 11 | 23 |