Os02g0613200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0613200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.93 | 0.361 | 12.8 | 0.212 | 1.67 | -1.58 | -0.556 | -1.36 | 0.213 | 16.2 | 5.47 | 89 | 2.93 | 3.95 |
| 60.04 | 0.361 | 12.8 | 0.337 | 1.76 | -1.63 | -0.298 | -- | 0.206 | 16.3 | 5.083 | 106 | 2.78 | 3.78 |
| 58.49 | 0.356 | 12.8 | 0.233 | 1.65 | -1.63 | -- | -0.893 | 0.205 | 16.2 | 5.612 | 114 | 2.67 | 3.88 |
| 59.44 | 0.359 | 12.8 | 0.285 | 1.66 | -1.69 | -- | -- | 0.216 | 16.2 | 5.342 | 113 | 2.73 | 3.77 |
| 136.94 | 0.545 | 12.8 | 0.371 | -- | -2.47 | -- | -0.829 | 0.347 | -- | 8.716 | 105 | 2.5 | 4.4 |
| 119.32 | 0.512 | 12.8 | 0.18 | 2.6 | -- | 0.525 | -- | 0.197 | 16.7 | -- | -- | -- | -- |
| 120.05 | 0.513 | 12.8 | 0.183 | 2.61 | -- | -- | -- | 0.2 | 16.7 | -- | -- | -- | -- |
| 136.23 | 0.544 | 12.8 | 0.327 | -- | -2.57 | -- | -- | 0.272 | -- | 9.247 | 108 | 2.47 | 4.3 |
| 61.69 | 0.366 | 12.8 | -- | 1.64 | -1.67 | -- | -- | 0.199 | 16.2 | 5.539 | 110 | 2.76 | 3.75 |
| 480.96 | 1.02 | 12.8 | 0.0838 | -- | -- | -- | -- | 0.132 | -- | -- | -- | -- | -- |
| 120.93 | 0.514 | 12.8 | -- | 2.6 | -- | -- | -- | 0.18 | 16.7 | -- | -- | -- | -- |
| 118.06 | 0.506 | 12.9 | -- | -- | -2.62 | -- | -- | 0.162 | -- | 12.92 | 258 | 0.667 | 4.7 |
| 481.15 | 1.02 | 12.8 | -- | -- | -- | -- | -- | 0.123 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.13 | wind | 5.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 4 | 61.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 4 |
| 5 | 61.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 6 | 61.99 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 9 | 62.46 | wind | 3.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 35 | 64.17 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 37 | 64.17 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 38 | 64.17 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 41 | 64.17 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 42 | 64.17 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 44 | 64.17 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 49 | 64.17 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 50 | 64.17 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 54 | 64.18 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 58 | 64.39 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 64 | 64.80 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 66 | 64.83 | humidity | 70.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 67 | 64.83 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 68 | 64.87 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 71 | 64.92 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 73 | 64.92 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 74 | 64.92 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 76 | 64.92 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 77 | 64.92 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 79 | 64.92 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 81 | 64.96 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 83 | 65.02 | wind | 9.0 | 90 | < th | dose independent | rect. | 7 | 20 |
| 107 | 65.28 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 109 | 65.29 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 138 | 65.83 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 147 | 66.28 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 20 |
| 148 | 66.28 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 167 | 66.52 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 4 |
| 168 | 66.52 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 4 |
| 187 | 67.13 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 20 |
| 188 | 67.13 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 196 | 67.32 | radiation | 40.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 214 | 67.83 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 4 |
| 251 | 68.55 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 257 | 68.74 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 7 | 20 |
| 259 | 68.78 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 276 | 69.15 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 278 | 69.15 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 279 | 69.15 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 282 | 69.15 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 283 | 69.15 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 284 | 69.15 | radiation | 20.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 287 | 69.15 | temperature | 10.0 | 10 | > th | dose independent | rect. | 7 | 20 |
| 292 | 69.28 | wind | 9.0 | 10 | < th | dose independent | rect. | 7 | 20 |
| 338 | 69.73 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 371 | 70.12 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 7 | 20 |
| 373 | 70.12 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 7 | 20 |
| 376 | 70.25 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 4 | 3 |
| 381 | 70.34 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 2 |
| 517 | 71.95 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 546 | 72.19 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 547 | 72.19 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 5 |
| 550 | 72.19 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 554 | 72.19 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 5 |
| 559 | 72.19 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 5 |
| 560 | 72.19 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 19 |
| 564 | 72.20 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 570 | 72.28 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 592 | 72.50 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 7 | 20 |
| 736 | 73.70 | temperature | 30.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 761 | 73.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 15 |
| 769 | 73.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 15 |
| 870 | 74.47 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 875 | 74.55 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 7 | 20 |
| 883 | 74.62 | wind | 9.0 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 921 | 75.05 | wind | 1.0 | 270 | > th | dose independent | rect. | 5 | 20 |