BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0613200 Os02g0613200|AK098853
(582 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G15740.1 | chr1:5411509-5414544 FORWARD LENGTH=586 608 e-174
AT4G23840.1 | chr4:12400379-12403190 FORWARD LENGTH=598 85 1e-16
AT5G23340.1 | chr5:7856314-7857983 FORWARD LENGTH=406 60 4e-09
AT5G27920.1 | chr5:9942063-9944507 REVERSE LENGTH=643 55 1e-07
AT5G46330.1 | chr5:18791802-18795407 FORWARD LENGTH=1174 54 2e-07
AT5G51350.1 | chr5:20867860-20870621 REVERSE LENGTH=896 52 7e-07
AT1G75640.1 | chr1:28403600-28407022 REVERSE LENGTH=1141 51 2e-06
AT1G33600.1 | chr1:12180776-12182212 FORWARD LENGTH=479 50 5e-06
AT4G13920.1 | chr4:8043861-8046536 FORWARD LENGTH=892 49 6e-06
AT3G11010.1 | chr3:3450988-3453672 REVERSE LENGTH=895 49 9e-06
>AT1G15740.1 | chr1:5411509-5414544 FORWARD LENGTH=586
Length = 585
Score = 608 bits (1568), Expect = e-174, Method: Compositional matrix adjust.
Identities = 348/583 (59%), Positives = 426/583 (73%), Gaps = 6/583 (1%)
Query: 1 MGAVCSRKRSQLVHEDDSFQTSSRFXXXXXXXXXXXXXPRSNSDVSRKGQGKGPGRCPSL 60
MG CSRKR Q V + + S ++ RS SDV RK G CPSL
Sbjct: 8 MGGACSRKRDQQVEDILNRGVSGKYSKSSSSKWLATSLSRSGSDVKRKN-----GECPSL 62
Query: 61 MELCVAKACEDINKYSSFSVLPRDLSQQIFNELVASNRLTETLLETFRDCALQDIDLGEY 120
MELCV K EDI++Y+ FS LPRD+SQQIF+ELV S RLT LE FRDCA+QD+ LGEY
Sbjct: 63 MELCVRKIQEDIDRYTKFSDLPRDISQQIFDELVYSQRLTLKSLEAFRDCAIQDLYLGEY 122
Query: 121 PGVNDAWMEVVASQRHSLLSVDISCSEITDSGLYLLRDCPNMQSLACNYCDMISEHGLGI 180
PGVND WM+V++SQ SLLSVD S S+ITDSGL L+ C N++SL N+CD IS GL
Sbjct: 123 PGVNDDWMDVISSQSTSLLSVDFSGSDITDSGLVSLKGCTNLESLNFNFCDQISNRGLVH 182
Query: 181 LSGLSNLTSLSFKSSDGITAEAMEAFANLVNLVNLDLERCLKIHGGLVHLKGLRNLESLN 240
LSGLSNLTSLSF+ + ITA+ M A +NLVNL LDLE+C I GGLVHL+ L LESLN
Sbjct: 183 LSGLSNLTSLSFRRNAAITAQGMRALSNLVNLKKLDLEKCPGIDGGLVHLRALTKLESLN 242
Query: 241 MRYCNNIADSDIKYLSDLTNLKELQLACCRITDLGVSYLRGLSKLTQLNLEGC-PVTAAC 299
+++CN I D+D++ LS LTNL+ LQ+ C +ITD+G+SYL+GL+KL LNLEGC VTAAC
Sbjct: 243 IKWCNCITDADMEPLSVLTNLRSLQICCSKITDIGISYLKGLNKLNLLNLEGCRHVTAAC 302
Query: 300 LEAISGLASLVVLNLSRCGIYGEGCENFQGLKKLKVLNLGFNNITDDCLAHLKELINLES 359
L+ ++ LA L+ LNL+RC GCE F L LK+LNLG NNIT+ CL HLK L LES
Sbjct: 303 LDTLTALAGLMYLNLNRCNFSDSGCEKFSDLINLKILNLGMNNITNSCLVHLKGLTKLES 362
Query: 360 LNLDSCKVGDEGXXXXXXXXXXXXXELSDTEVGSSGLQHLSGLRNLESINLSFTLVTDTG 419
LNLDSC++GDEG ELSDTEVGS+GL+HLSGL NLESINLSFT+VTD+G
Sbjct: 363 LNLDSCRIGDEGLVHLSGMLELKSLELSDTEVGSNGLRHLSGLSNLESINLSFTVVTDSG 422
Query: 420 MKKISALNSLKSVNLDNRQITDVXXXXXXXXXXXXXXDLFGARITDYGTSCFRFFKNLES 479
++K+S L SL+++NLD R +TD DLFGARITD GT+ R K L+S
Sbjct: 423 LRKLSGLTSLRTLNLDARHVTDAGLSALTSLTGLTHLDLFGARITDSGTNHLRNLKKLQS 482
Query: 480 LEVCGGLITDAGVKNIKDLKALKQLNLSQNVNLTDKTLELISGLTALVSLNVSNTRVSNA 539
LE+CGG +TD GVKNIKDL +L LNLSQN NLTDKTLELISGLT LVSLNVSN+RVS++
Sbjct: 483 LEICGGGLTDTGVKNIKDLSSLTLLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRVSSS 542
Query: 540 GLRHLKDLQNLRSLSLDSCRVTTSEVKKLQATVLPNLISVRPE 582
GLRHLK L+NLRSL+L+SC+++ ++++KLQAT LPNL++ RPE
Sbjct: 543 GLRHLKPLKNLRSLTLESCKLSANDIRKLQATDLPNLVNFRPE 585
>AT4G23840.1 | chr4:12400379-12403190 FORWARD LENGTH=598
Length = 597
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 186/437 (42%), Gaps = 68/437 (15%)
Query: 190 LSFKSSDGITAEAMEAFANLVNLVNLDLERCLKIHGG-LVHLKGLRNLESLNMRYCNNIA 248
+ + + AE M VNL+ L+L C +I+ L + GL +L L++ C +
Sbjct: 66 IDLRGKSSVNAEWMAYIGGFVNLITLNLSDCQRINSSTLWPITGLTSLTELDLSRCFKVT 125
Query: 249 DSDIKYLSDLTNLKELQLACCRITDLGVSYLRGLSKLTQLNLEGCPVTAACLEAISGLAS 308
D+ +K+L + NLK+L ++ +T++G+S L L KL+ L+L G PVT L ++ L
Sbjct: 126 DAGMKHLQSVVNLKKLWISQTGVTEVGISLLASLKKLSLLDLGGLPVTDQNLISLQALTK 185
Query: 309 LVVLNLSRCGIYGEGCENFQGLKKLKVLNLGFNNITDDCLAHLKELINLESLNLDSCKVG 368
L L+ I+G N + LK NL F N++ + + +LE L++++C +
Sbjct: 186 LEYLD-----IWGSNVTNQGAVSILKFSNLSFLNLSWTSITQTPNIPHLECLHMNTCTIV 240
Query: 369 DEGXXXXXXXX-----------XXXXXELSDT--------EVGSSGLQHLSGLR---NLE 406
E LS T +V + L++ S L NLE
Sbjct: 241 SEPKTHSSLASLKKLVLSGANFSAETESLSFTNKSCITYLDVSKTSLKNFSFLETMFNLE 300
Query: 407 SINLSFTLVTDTGMKKISAL-NSLKSVNLDNRQITD---------VXXXXXXXXXXXXXX 456
++LS T D + ++ + +LK++N+ + QIT V
Sbjct: 301 HLDLSSTAFGDDSVGFVACVGENLKNLNVSDTQITPSGVGNLAGHVPQLETLSMSQTFVD 360
Query: 457 DLFGARIT---------DYG-TSCFRFF-------------------KNLESLEVCGGLI 487
DL I+ D G S F+ +LE+L + +
Sbjct: 361 DLSILLISTTMPCIKALDLGMNSTLGFYYLISPQEEKEKSLAALQSLTSLETLSLEHPYL 420
Query: 488 TDAGVKNIKDLKALKQLNLSQNVNLTDKTLELISGLTALVSLNVSNTRVSNAGLRHLKDL 547
D + + L L L+L+ + +LTD TL +S L LVSL V + +++ GL +
Sbjct: 421 GDKALSGLSSLTGLTHLSLT-STSLTDSTLHHLSSLPNLVSLGVRDGVLTSNGLEKFRPP 479
Query: 548 QNLRSLSLDSCRVTTSE 564
LR+L L C + T +
Sbjct: 480 NRLRTLDLQGCWLLTKD 496
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 110/486 (22%), Positives = 193/486 (39%), Gaps = 114/486 (23%)
Query: 60 LMELCVAKACED---INKYS----SFSVLPRDLSQQIFNELVASNRLTETLLETFRDCAL 112
L+ LC+ +AC+ + ++ S LP L+ + L+ L +LLE F+ ++
Sbjct: 5 LVRLCLKEACKSGDAVERWRLQRRSLESLPPHLADALLRRLLKKRLLFPSLLEGFK-YSV 63
Query: 113 QDIDLGEYPGVNDAWMEVVASQRHSLLSVDIS-CSEITDSGLYLLRDCPNMQSLACNYCD 171
++IDL VN WM + + L+++++S C I S L+ + ++ L + C
Sbjct: 64 ENIDLRGKSSVNAEWMAYIGGFVN-LITLNLSDCQRINSSTLWPITGLTSLTELDLSRCF 122
Query: 172 MISEHGLGILSGLSNLTSLSFKSSDGITAEAMEAFA------------------NLVNLV 213
+++ G+ L + NL L + S G+T + A NL++L
Sbjct: 123 KVTDAGMKHLQSVVNLKKL-WISQTGVTEVGISLLASLKKLSLLDLGGLPVTDQNLISLQ 181
Query: 214 NLDLERCLKIHG------GLVHLKGLRNLESLNMRYCNNIADSDIKYL------------ 255
L L I G G V + NL LN+ + + +I +L
Sbjct: 182 ALTKLEYLDIWGSNVTNQGAVSILKFSNLSFLNLSWTSITQTPNIPHLECLHMNTCTIVS 241
Query: 256 -----SDLTNLKELQLA-----------------CCRITDLGVSYLRGLSKL-TQLNLEG 292
S L +LK+L L+ C D+ + L+ S L T NLE
Sbjct: 242 EPKTHSSLASLKKLVLSGANFSAETESLSFTNKSCITYLDVSKTSLKNFSFLETMFNLEH 301
Query: 293 CPVTAACL--EAISGLA----SLVVLNLSRCGIYGEGCENFQG----------------- 329
+++ +++ +A +L LN+S I G N G
Sbjct: 302 LDLSSTAFGDDSVGFVACVGENLKNLNVSDTQITPSGVGNLAGHVPQLETLSMSQTFVDD 361
Query: 330 ---------LKKLKVLNLGFNNI------------TDDCLAHLKELINLESLNLDSCKVG 368
+ +K L+LG N+ + LA L+ L +LE+L+L+ +G
Sbjct: 362 LSILLISTTMPCIKALDLGMNSTLGFYYLISPQEEKEKSLAALQSLTSLETLSLEHPYLG 421
Query: 369 DEGXXXXXXXXXXXXXELSDTEVGSSGLQHLSGLRNLESINLSFTLVTDTGMKKISALNS 428
D+ L+ T + S L HLS L NL S+ + ++T G++K N
Sbjct: 422 DKALSGLSSLTGLTHLSLTSTSLTDSTLHHLSSLPNLVSLGVRDGVLTSNGLEKFRPPNR 481
Query: 429 LKSVNL 434
L++++L
Sbjct: 482 LRTLDL 487
>AT5G23340.1 | chr5:7856314-7857983 FORWARD LENGTH=406
Length = 405
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 154/323 (47%), Gaps = 53/323 (16%)
Query: 113 QDIDLGEYPGVNDAWMEVVASQRHSLLSVDI-SCSEITDSGLYLLRDCPNM-QSLACNYC 170
Q I YPGV D+ + V++ L +++ +C ITD+GL + C ++ Q L +YC
Sbjct: 75 QSISRSFYPGVTDSDLAVISEGFKFLRVLNLHNCKGITDTGLASIGRCLSLLQFLDVSYC 134
Query: 171 DMISEHGL-GILSGLSNLTSLSFKSSDGITAEAMEAFANLV-NLVNLDLERCLKI-HGGL 227
+S+ GL + G +L +L IT E++++ + +L L L+ C I GL
Sbjct: 135 RKLSDKGLSAVAEGCHDLRALHLAGCRFITDESLKSLSERCRDLEALGLQGCTNITDSGL 194
Query: 228 VHL-KGLRNLESLNMRYCNNIADSDIKYLSD--LTNLKELQLA-CCRITDLGVSYLRGLS 283
L KG R ++SL++ C+N+ D+ + ++ ++LK L+L C ++ + +S L
Sbjct: 195 ADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACASSLKTLKLLDCYKVGNESISSLAQFC 254
Query: 284 K-LTQLNLEGCPVTAACLEAISGLASLVVLNLSRCGIYGEGCENFQGLKKLKVLNLGFN- 341
K L L + GC + E+I LA + C++ LK L + +
Sbjct: 255 KNLETLIIGGCRDISD--ESIMLLA--------------DSCKD-----SLKNLRMDWCL 293
Query: 342 NITDDCLAH-LKELINLESLNLDSCKVGDEGXXXXXXXXXXXXXELSDTEVGSSGLQHLS 400
NI+D L+ LK+ NLE+L++ C+ E++DT G +
Sbjct: 294 NISDSSLSCILKQCKNLEALDIGCCE------------------EVTDTAFRDLGSDDVL 335
Query: 401 GLRNLESINLSFTLVTDTGMKKI 423
GL+ L+ N T +T TG+ K+
Sbjct: 336 GLKVLKVSNC--TKITVTGIGKL 356
>AT5G27920.1 | chr5:9942063-9944507 REVERSE LENGTH=643
Length = 642
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 110/261 (42%), Gaps = 60/261 (22%)
Query: 145 CSEITDSGLY-LLRDCPNMQSLACNYCDMISEHGL-GILSGLSNLTSLSFKSSDGITAEA 202
C ++TD G+ L R+C N+++L C +++ + + NL +L +S IT +
Sbjct: 335 CVDVTDIGMISLARNCLNLKTLNLACCGFVTDVAISAVAQSCRNLGTLKLESCHLITEKG 394
Query: 203 MEAFANLVNLVN-LDLERCLKIHG-GLVHLKGLRNLESLNMRYCNNIADSDIKYL-SDLT 259
+++ LV LDL C ++ GL ++ NL+ L + C NI+D I ++ S +
Sbjct: 395 LQSLGCYSMLVQELDLTDCYGVNDRGLEYISKCSNLQRLKLGLCTNISDKGIFHIGSKCS 454
Query: 260 NLKELQLA---------------------------CCRITDLGVSYLRGLSKLTQLNLEG 292
L EL L CC +TD GV +R L L+ L L G
Sbjct: 455 KLLELDLYRCAGFGDDGLAALSRGCKSLNRLILSYCCELTDTGVEQIRQLELLSHLELRG 514
Query: 293 CPVTAACLEAISGLASLVVLNLSRCGIYGEGCENFQGLKKLKVLNLGFNNITDD----CL 348
L+ I+G+ + GC KKL L++ DD L
Sbjct: 515 -------LKNITGVGLAAI---------ASGC------KKLGYLDVKLCENIDDSGFWAL 552
Query: 349 AHLKELINLESLNLDSCKVGD 369
A+ + NL +NL +C V D
Sbjct: 553 AYFSK--NLRQINLCNCSVSD 571
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 183/428 (42%), Gaps = 73/428 (17%)
Query: 155 LLRDCPNMQSLACNYC-----DMISEHGL-GILSGLSNLTSLSFKSSDGITAEAMEAFAN 208
LL PN+ SL + C D++ L G +S L + SL+ S + A +E A
Sbjct: 60 LLFKYPNLSSLDLSVCPKLDDDVVLRLALDGAISTL-GIKSLNLSRSTAVRARGLETLAR 118
Query: 209 LVNLVNLDLERCLKIHGGLVHLKGLRNLESLNMRYCNNIADSDIKYLSDLTNLKELQL-A 267
+ + LE +++ +C D + LS T L+EL++
Sbjct: 119 MCH-----------------------ALERVDVSHCWGFGDREAAALSSATGLRELKMDK 155
Query: 268 CCRITDLGVSYLR-GLSKLTQLNLEGCPVTAACLEAISGLASLVVLNLSRCGIYGEGCEN 326
C ++D+G++ + G S L +++L+ C + +S GI C+
Sbjct: 156 CLSLSDVGLARIVVGCSNLNKISLKWC------------------MEISDLGI-DLLCKI 196
Query: 327 FQGLKKLKVLNLGFNNITDDCLAHLKELINLESLNLDSCKVGDEGXXXXXXXXXXXXXEL 386
+GLK L V + IT+D + + L+ LE L++ SC + D+G E+
Sbjct: 197 CKGLKSLDV---SYLKITNDSIRSIALLVKLEVLDMVSCPLIDDGGLQFLENGSPSLQEV 253
Query: 387 SDT---EVGSSGLQHLSGLRNLESINL-----SFTLVTDTGMKKISALNSLKSVNLDNRQ 438
T V SGL +S +R I L + V+ + +K I L LK++ +D
Sbjct: 254 DVTRCDRVSLSGL--ISIVRGHPDIQLLKASHCVSEVSGSFLKYIKGLKHLKTIWIDGAH 311
Query: 439 ITDVXXXXXXXXXXXXXXDLFGAR---ITDYG-TSCFRFFKNLESLEV-CGGLITDAGVK 493
++ ++ +R +TD G S R NL++L + C G +TD +
Sbjct: 312 VS-DSSLVSLSSSCRSLMEIGLSRCVDVTDIGMISLARNCLNLKTLNLACCGFVTDVAIS 370
Query: 494 NI-KDLKALKQLNLSQNVNLTDKTLELISGLTALVS-LNVSNTR-VSNAGLRHLKDLQNL 550
+ + + L L L +T+K L+ + + LV L++++ V++ GL ++ NL
Sbjct: 371 AVAQSCRNLGTLKLESCHLITEKGLQSLGCYSMLVQELDLTDCYGVNDRGLEYISKCSNL 430
Query: 551 RSLSLDSC 558
+ L L C
Sbjct: 431 QRLKLGLC 438
>AT5G46330.1 | chr5:18791802-18795407 FORWARD LENGTH=1174
Length = 1173
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 184 LSNLTSLSFKSSDGITAEAMEAFANLVNLVNLDLERCL---KIHGGLVHLKGLRNLESLN 240
L+NLT L S + +T + F NL+NL +L L L I + + L LE
Sbjct: 215 LANLTDLDL-SGNQLTGKIPRDFGNLLNLQSLVLTENLLEGDIPAEIGNCSSLVQLE--- 270
Query: 241 MRYCNNIADSDIKYLSDLTNLKELQLACCRITDLGVSYLRGLSKLTQLNLEGCPVTAACL 300
Y N + L +L L+ L++ ++T S L L++LT L L +
Sbjct: 271 -LYDNQLTGKIPAELGNLVQLQALRIYKNKLTSSIPSSLFRLTQLTHLGLSENHLVGPIS 329
Query: 301 EAISGLASLVVLNLSRCGIYGEGCENFQGLKKLKVLNLGFNNITDDCLAHLKELINLESL 360
E I L SL VL L GE ++ L+ L VL +GFNNI+ + A L L NL +L
Sbjct: 330 EEIGFLESLEVLTLHSNNFTGEFPQSITNLRNLTVLTVGFNNISGELPADLGLLTNLRNL 389
>AT5G51350.1 | chr5:20867860-20870621 REVERSE LENGTH=896
Length = 895
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 10/243 (4%)
Query: 204 EAFANLVNLVNLDLER------CLKIHGGLVHLKGLRNLESLNMRYCNNIADSDIKYLSD 257
E F N+ NL +LD+ R +GG LK L L++L+ N+ + +LS
Sbjct: 120 EIFFNMTNLRSLDISRNNFSGRFPDGNGGDSSLKNLIFLDALS----NSFSGPLPIHLSQ 175
Query: 258 LTNLKELQLACCRITDLGVSYLRGLSKLTQLNLEGCPVTAACLEAISGLASLVVLNLSRC 317
L NLK L LA T S L L+L G ++ + + L +L + +
Sbjct: 176 LENLKVLNLAGSYFTGSIPSQYGSFKNLEFLHLGGNLLSGHIPQELGNLTTLTHMEIGYN 235
Query: 318 GIYGEGCENFQGLKKLKVLNLGFNNITDDCLAHLKELINLESLNLDSCKVGDEGXXXXXX 377
G + +LK L++ N++ H L LESL L + E
Sbjct: 236 SYEGVIPWEIGYMSELKYLDIAGANLSGFLPKHFSNLTKLESLFLFRNHLSREIPWELGE 295
Query: 378 XXXXXXXELSDTEVGSSGLQHLSGLRNLESINLSFTLVTDTGMKKISALNSLKSVNLDNR 437
+LSD + + + SGL+NL +NL F ++ T + I+ L SL ++ + N
Sbjct: 296 ITSLVNLDLSDNHISGTIPESFSGLKNLRLLNLMFNEMSGTLPEVIAQLPSLDTLFIWNN 355
Query: 438 QIT 440
+
Sbjct: 356 YFS 358
>AT1G75640.1 | chr1:28403600-28407022 REVERSE LENGTH=1141
Length = 1140
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 1/132 (0%)
Query: 233 LRNLESLNMRYCNNIADSDIKYLSDLTNLKELQLACCRITDLGVSYLRGLSKLTQLNLEG 292
L LE+LN+ N++ + ++ L NL L L+ R + S + L L+ LN+ G
Sbjct: 433 LYGLETLNLNE-NHLTGAIPSEITKLANLTILNLSFNRFSGEVPSNVGDLKSLSVLNISG 491
Query: 293 CPVTAACLEAISGLASLVVLNLSRCGIYGEGCENFQGLKKLKVLNLGFNNITDDCLAHLK 352
C +T +ISGL L VL++S+ I G+ GL L+V+ LG N +
Sbjct: 492 CGLTGRIPVSISGLMKLQVLDISKQRISGQLPVELFGLPDLQVVALGNNLLGGVVPEGFS 551
Query: 353 ELINLESLNLDS 364
L++L+ LNL S
Sbjct: 552 SLVSLKYLNLSS 563
>AT1G33600.1 | chr1:12180776-12182212 FORWARD LENGTH=479
Length = 478
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 4/219 (1%)
Query: 223 IHGGLVHLKGLRNLESLNMRYCNNIADSDIKYLSDLTNLKELQLACCRITDLGVSYLRGL 282
I L L+ L + N+R NI S ++L L N+K++ R++ + + L
Sbjct: 93 ISPSLAKLQHLVGIYFTNLR---NITGSFPQFLFQLPNVKQVYFTNSRLSGPLPANIGAL 149
Query: 283 SKLTQLNLEGCPVTAACLEAISGLASLVVLNLSRCGIYGEGCENFQGLKKLKVLNLGFNN 342
S+L +L+L+G T +IS L L +LNL + G LK L LN G N
Sbjct: 150 SELGELSLDGNLFTGPIPSSISNLTRLYLLNLGDNLLTGTIPLGLANLKILLSLNFGNNR 209
Query: 343 ITDDCLAHLKELINLESLNLDSCKV-GDEGXXXXXXXXXXXXXELSDTEVGSSGLQHLSG 401
+++ K + L+SL L K G+ +LS + + LS
Sbjct: 210 LSETIPDIFKSMQKLQSLTLSRNKFSGNLPPSIASLKPILNYLDLSQNNLSGTIPTFLSN 269
Query: 402 LRNLESINLSFTLVTDTGMKKISALNSLKSVNLDNRQIT 440
+ L+S++LS + K ++ + L +NL + +T
Sbjct: 270 FKVLDSLDLSRNRFSGVVPKSLANMPKLFHLNLSHNFLT 308
>AT4G13920.1 | chr4:8043861-8046536 FORWARD LENGTH=892
Length = 891
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Query: 230 LKGLRNLESLNMRYCNNIADSDIKYLSDLTNLKELQLACCRITDLGVSYLRGLSKLTQLN 289
L+ L L L++ Y +++ + + +L +L+ L L C+ T S L L+ LT L+
Sbjct: 149 LRSLSYLTDLDLSYNDDLTGEILDSMGNLKHLRVLSLTSCKFTGKIPSSLGNLTYLTDLD 208
Query: 290 LEGCPVTAACLEAISGLASLVVLNLSRCGIYGEGCENFQGLKKLKVLNLGFNNIT---DD 346
L T +++ L SL VLNL RC +G+ + L L L++ N T D
Sbjct: 209 LSWNYFTGELPDSMGNLKSLRVLNLHRCNFFGKIPTSLGSLSNLTDLDISKNEFTSEGPD 268
Query: 347 CLAHLKELINLE 358
++ L L + +
Sbjct: 269 SMSSLNRLTDFQ 280
>AT3G11010.1 | chr3:3450988-3453672 REVERSE LENGTH=895
Length = 894
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 8/187 (4%)
Query: 184 LSNLTSLSFKSSDGITAEAMEAFANLVNLVNLDL---ERCLKIHGGLVHLKGLRNLESLN 240
LS+LTSL S + + + + + NL L +LDL + +I + +L L L
Sbjct: 81 LSHLTSLDL-SYNRFSGQILNSIGNLSRLTSLDLSFNQFSGQIPSSIGNLSHLTFLGLSG 139
Query: 241 MRYCNNIADSDIKYLSDLTNLKELQLACCRITDLGVSYLRGLSKLTQLNLEGCPVTAACL 300
R+ I S + +L++L L L+ R S + GLS LT L+L +
Sbjct: 140 NRFFGQIPSS----IGNLSHLTFLGLSGNRFFGQFPSSIGGLSNLTNLHLSYNKYSGQIP 195
Query: 301 EAISGLASLVVLNLSRCGIYGEGCENFQGLKKLKVLNLGFNNITDDCLAHLKELINLESL 360
+I L+ L+VL LS YGE +F L +L L++ FN + + L L L +
Sbjct: 196 SSIGNLSQLIVLYLSVNNFYGEIPSSFGNLNQLTRLDVSFNKLGGNFPNVLLNLTGLSVV 255
Query: 361 NLDSCKV 367
+L + K
Sbjct: 256 SLSNNKF 262
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.134 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,745,199
Number of extensions: 410637
Number of successful extensions: 3076
Number of sequences better than 1.0e-05: 60
Number of HSP's gapped: 2954
Number of HSP's successfully gapped: 81
Length of query: 582
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 478
Effective length of database: 8,255,305
Effective search space: 3946035790
Effective search space used: 3946035790
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)