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Os02g0609400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.8 (0.0155) R2 : 0.00582
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0534 (0.0327) R2dN8 : 0.00752 R2N8 : 0.00582
σ : 0.293
deviance : 39.29
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
20.17 0.211 12.9 -0.38 0.557 -0.514 0.0335 0.848 -0.107 5.93 24.64 387 -- --
21.06 0.214 12.9 -0.317 0.508 -0.625 0.258 -- -0.0845 6.12 22.85 2014 -- --
20.16 0.209 12.9 -0.381 0.556 -0.51 -- 0.859 -0.106 5.97 24.6 409 -- --
21.26 0.215 12.9 -0.308 0.506 -0.622 -- -- -0.0841 6.08 22.88 1999 -- --
33.26 0.269 12.9 -0.484 -- -0.485 -- 0.773 -0.137 -- 25.6 2769 -- --
26.03 0.239 12.8 -0.0956 0.498 -- 0.266 -- 0.0343 5.93 -- -- -- --
26.2 0.24 12.8 -0.0934 0.499 -- -- -- 0.0332 5.93 -- -- -- --
33.67 0.27 12.9 -0.417 -- -0.65 -- -- -0.0911 -- 21.49 4236 -- --
23.05 0.225 12.8 -- 0.519 -0.496 -- -- -0.0123 5.41 23.2 1908 -- --
39.13 0.292 12.8 -0.0785 -- -- -- -- 0.0447 -- -- -- -- --
26.43 0.241 12.8 -- 0.498 -- -- -- 0.0436 5.94 -- -- -- --
35.89 0.279 12.9 -- -- -0.394 -- -- -0.0292 -- 25.1 2734 -- --
39.29 0.293 12.8 -- -- -- -- -- 0.0534 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 19.62 temperature 10 720 > th dose dependent rect. 19 10
2 19.64 temperature 25 720 < th dose dependent sin 13 NA
3 19.66 temperature 25 720 < th dose dependent rect. 19 8
4 19.67 temperature 25 720 < th dose dependent rect. 17 12
5 19.70 temperature 25 720 < th dose dependent rect. 18 10
13 19.75 temperature 10 720 > th dose dependent rect. 17 14
14 19.76 temperature 25 270 < th dose dependent rect. 21 13
19 19.79 temperature 25 720 < th dose dependent rect. 21 5
26 19.83 temperature 25 270 < th dose dependent sin 8 NA
55 19.93 temperature 10 720 > th dose dependent sin 12 NA
69 20.02 humidity 90 14400 > th dose dependent rect. 5 1
80 20.06 radiation 20 14400 > th dose independent rect. 6 1
96 20.08 temperature 25 270 < th dose dependent rect. 17 18
110 20.13 temperature 25 720 < th dose dependent rect. 23 2
115 20.14 humidity 60 43200 < th dose independent rect. 8 1
119 20.16 temperature 20 14400 < th dose independent rect. 21 1
126 20.21 humidity 70 43200 < th dose dependent rect. 8 1
133 20.22 temperature 20 14400 > th dose independent rect. 21 1
155 20.26 humidity 60 43200 > th dose independent rect. 8 1
156 20.26 humidity 60 43200 < th dose dependent sin 7 NA
161 20.26 humidity 60 43200 < th dose dependent rect. 20 17
166 20.27 humidity 50 43200 < th dose dependent rect. 6 8
186 20.28 atmosphere 1015 14400 > th dose independent rect. 16 7
187 20.28 atmosphere 1015 14400 < th dose independent rect. 16 7
188 20.28 atmosphere 1015 14400 > th dose independent rect. 15 9
189 20.28 atmosphere 1015 14400 < th dose independent rect. 15 9
193 20.28 atmosphere 1015 14400 > th dose dependent rect. 23 1
195 20.28 humidity 50 43200 < th dose dependent rect. 8 6
205 20.29 atmosphere 1015 14400 > th dose independent rect. 18 4
211 20.29 humidity 50 43200 < th dose dependent rect. 13 1
214 20.29 humidity 50 43200 < th dose dependent rect. 11 3
232 20.30 atmosphere 1015 14400 < th dose independent rect. 19 2
233 20.30 atmosphere 1015 14400 < th dose independent rect. 18 4
239 20.30 wind 9 43200 > th dose independent rect. 8 12
240 20.30 wind 9 43200 < th dose independent rect. 4 16
242 20.30 humidity 50 43200 < th dose dependent rect. 11 1
285 20.32 humidity 50 43200 < th dose independent rect. 11 1
286 20.32 atmosphere 1015 14400 > th dose independent rect. 19 2
290 20.32 wind 9 43200 < th dose independent rect. 7 13
292 20.32 wind 9 43200 > th dose independent rect. 4 16
293 20.32 wind 9 43200 > th dose independent rect. 9 22
317 20.33 wind 9 43200 > th dose independent sin 23 NA
348 20.34 wind 9 43200 < th dose independent sin 0 NA
379 20.35 atmosphere 1015 43200 > th dose independent rect. 12 1
380 20.35 atmosphere 1015 43200 < th dose independent rect. 12 1
384 20.35 wind 9 43200 > th dose independent rect. 8 10
393 20.35 wind 9 43200 < th dose independent rect. 22 22
394 20.35 wind 9 43200 < th dose independent rect. 9 23
483 20.37 temperature 25 270 < th dose dependent rect. 20 22
485 20.38 wind 9 43200 < th dose independent rect. 8 9
495 20.38 humidity 50 43200 > th dose independent rect. 20 16
503 20.38 humidity 50 43200 > th dose independent rect. 19 20
505 20.38 wind 9 43200 > th dose independent rect. 22 22
508 20.38 humidity 80 14400 > th dose dependent rect. 12 1
525 20.39 atmosphere 1015 14400 < th dose independent sin 18 NA
526 20.39 humidity 80 14400 > th dose independent rect. 12 1
538 20.39 wind 9 43200 > th dose independent rect. 8 15
541 20.39 wind 9 43200 > th dose independent rect. 8 17
545 20.39 wind 9 43200 < th dose independent rect. 4 19
554 20.39 temperature 15 270 > th dose dependent sin 9 NA
572 20.40 humidity 50 43200 > th dose independent sin 7 NA
574 20.40 atmosphere 1015 14400 > th dose independent sin 17 NA
580 20.40 humidity 50 43200 > th dose independent rect. 4 8
602 20.40 wind 9 43200 > th dose independent rect. 4 19
642 20.41 humidity 60 43200 < th dose independent rect. 4 6
649 20.41 humidity 50 43200 > th dose independent rect. 4 11
669 20.41 wind 9 43200 < th dose independent rect. 7 16
680 20.41 wind 9 43200 > th dose independent rect. 13 20
682 20.41 wind 9 43200 < th dose independent rect. 13 20
691 20.41 wind 9 43200 > th dose independent rect. 24 23
736 20.42 humidity 50 43200 < th dose independent rect. 19 17
779 20.42 wind 7 43200 > th dose dependent rect. 4 16
782 20.43 wind 9 43200 < th dose independent no NA NA
785 20.43 humidity 50 43200 > th dose independent rect. 11 1
817 20.43 humidity 50 43200 < th dose independent rect. 20 19
842 20.43 wind 9 43200 > th dose dependent rect. 10 10
843 20.43 wind 7 43200 > th dose dependent rect. 8 12
845 20.43 wind 7 43200 > th dose dependent rect. 4 14
865 20.44 wind 9 43200 > th dose independent rect. 9 5
874 20.44 humidity 50 43200 < th dose independent rect. 4 10
930 20.44 wind 7 43200 > th dose dependent sin 23 NA
940 20.44 wind 7 43200 > th dose dependent rect. 8 10
961 20.45 humidity 50 43200 < th dose independent sin 6 NA
963 20.45 wind 7 43200 < th dose independent rect. 24 1