Os02g0598300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0598300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.18 | 0.236 | 11 | 0.236 | 0.38 | 0.827 | -0.0241 | 0.205 | 0.0998 | 4.86 | 3.537 | 466 | -- | -- |
| 25.21 | 0.234 | 11 | 0.208 | 0.38 | 0.831 | -0.0531 | -- | 0.0905 | 4.84 | 5.366 | 464 | -- | -- |
| 25.18 | 0.234 | 11 | 0.239 | 0.38 | 0.828 | -- | 0.221 | 0.101 | 4.86 | 3.63 | 466 | -- | -- |
| 25.22 | 0.234 | 11 | 0.202 | 0.38 | 0.833 | -- | -- | 0.0907 | 4.85 | 5.496 | 464 | -- | -- |
| 26.64 | 0.24 | 11 | 0.239 | -- | 0.706 | -- | 0.27 | 0.11 | -- | 9.559 | 1171 | -- | -- |
| 33.06 | 0.27 | 11 | 0.388 | 0.192 | -- | -0.0549 | -- | 0.214 | 3.12 | -- | -- | -- | -- |
| 33.07 | 0.269 | 11 | 0.389 | 0.191 | -- | -- | -- | 0.214 | 3.02 | -- | -- | -- | -- |
| 26.71 | 0.241 | 11 | 0.184 | -- | 0.708 | -- | -- | 0.0938 | -- | 12.05 | 1171 | -- | -- |
| 26.18 | 0.238 | 11 | -- | 0.406 | 0.927 | -- | -- | 0.0566 | 4.94 | 5.895 | 467 | -- | -- |
| 35.16 | 0.277 | 11 | 0.397 | -- | -- | -- | -- | 0.219 | -- | -- | -- | -- | -- |
| 37.06 | 0.285 | 11 | -- | 0.199 | -- | -- | -- | 0.171 | 3.03 | -- | -- | -- | -- |
| 27.49 | 0.244 | 11.1 | -- | -- | 0.783 | -- | -- | 0.062 | -- | 10.79 | 1180 | -- | -- |
| 39.33 | 0.293 | 11 | -- | -- | -- | -- | -- | 0.175 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.28 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 15 | 24.99 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 18 | 25.07 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 23 | 25.14 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 32 | 25.18 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 36 | 25.20 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 7 |
| 54 | 25.24 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 23 |
| 57 | 25.25 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 7 |
| 59 | 25.25 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 21 |
| 98 | 25.34 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 106 | 25.35 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 197 | 25.48 | temperature | 10 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 198 | 25.49 | temperature | 10 | 1440 | > th | dose dependent | sin | 7 | NA |
| 216 | 25.51 | temperature | 20 | 270 | > th | dose independent | rect. | 12 | 19 |
| 261 | 25.55 | temperature | 20 | 30 | > th | dose independent | rect. | 12 | 21 |
| 299 | 25.58 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 359 | 25.63 | temperature | 30 | 1440 | < th | dose dependent | sin | 8 | NA |
| 410 | 25.66 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 422 | 25.68 | temperature | 20 | 30 | > th | dose independent | rect. | 14 | 19 |
| 436 | 25.68 | temperature | 15 | 720 | > th | dose dependent | rect. | 7 | 23 |
| 479 | 25.72 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 21 |
| 714 | 25.90 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 19 |
| 776 | 25.93 | temperature | 15 | 30 | > th | dose dependent | rect. | 12 | 21 |
| 829 | 25.96 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 872 | 25.99 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 873 | 26.00 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 959 | 26.03 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |