Os02g0597800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Steroid nuclear receptor, ligand-binding domain containing protein.
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Os02g0597800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Steroid nuclear receptor, ligand-binding domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.97 | 0.215 | 11.5 | -0.447 | 0.509 | -0.424 | -0.00498 | 1.78 | -0.0813 | 5.88 | 94 | 42 | -- | -- |
| 22.73 | 0.222 | 11.5 | -0.442 | 0.491 | -0.501 | 0.443 | -- | -0.0743 | 5.97 | 94.8 | 30 | -- | -- |
| 20.86 | 0.213 | 11.5 | -0.458 | 0.506 | -0.543 | -- | 2.09 | -0.0801 | 5.79 | 94.52 | 30 | -- | -- |
| 22.6 | 0.221 | 11.5 | -0.445 | 0.474 | -0.751 | -- | -- | -0.0644 | 6.07 | 94.92 | 13 | -- | -- |
| 31.22 | 0.26 | 11.5 | -0.461 | -- | 0.172 | -- | 1.99 | -0.0267 | -- | 93.86 | 186 | -- | -- |
| 24.48 | 0.232 | 11.5 | -0.481 | 0.444 | -- | 0.261 | -- | -0.0471 | 6.11 | -- | -- | -- | -- |
| 24.65 | 0.232 | 11.5 | -0.478 | 0.445 | -- | -- | -- | -0.0481 | 6.1 | -- | -- | -- | -- |
| 28.42 | 0.248 | 11.5 | -0.468 | -- | 0.422 | -- | -- | -0.0162 | -- | 62.39 | 387 | -- | -- |
| 28.3 | 0.248 | 11.5 | -- | 0.505 | -0.782 | -- | -- | -0.0132 | 5.89 | 94.83 | 13 | -- | -- |
| 34.91 | 0.276 | 11.5 | -0.465 | -- | -- | -- | -- | -0.0381 | -- | -- | -- | -- | -- |
| 30.67 | 0.259 | 11.5 | -- | 0.438 | -- | -- | -- | 0.00517 | 6.16 | -- | -- | -- | -- |
| 34.25 | 0.273 | 11.5 | -- | -- | 0.496 | -- | -- | 0.0267 | -- | 43 | 382 | -- | -- |
| 40.63 | 0.298 | 11.5 | -- | -- | -- | -- | -- | 0.0135 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.10 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 2 | 20.05 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 3 | 20.05 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 4 | 20.06 | wind | 1.0 | 270 | < th | dose independent | rect. | 23 | 2 |
| 7 | 20.63 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 8 | 20.63 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 4 |
| 12 | 20.64 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 7 |
| 21 | 20.68 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 23 | 20.69 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 40 | 20.74 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 51 | 20.77 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 74 | 21.14 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 3 |
| 81 | 21.19 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 3 |
| 83 | 21.22 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 20 | 7 |
| 84 | 21.23 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 88 | 21.24 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 89 | 21.24 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 1 | 5 |
| 91 | 21.25 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 94 | 21.29 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 5 |
| 101 | 21.30 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 23 | 3 |
| 110 | 21.34 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 120 | 21.38 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 23 | 2 |
| 136 | 21.50 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 140 | 21.50 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 22 | 5 |
| 145 | 21.52 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 24 | 1 |
| 148 | 21.53 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 15 |
| 154 | 21.54 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 15 |
| 158 | 21.54 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 1 | 3 |
| 165 | 21.56 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 11 | 16 |
| 206 | 21.66 | humidity | 90.0 | 30 | > th | dose independent | rect. | 24 | 5 |
| 218 | 21.67 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 5 |
| 231 | 21.68 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 3 |
| 250 | 21.68 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 310 | 21.77 | temperature | 20.0 | 10 | > th | dose independent | rect. | 22 | 7 |
| 365 | 21.86 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 1 |
| 371 | 21.86 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 1 |
| 398 | 21.89 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 24 | 18 |
| 407 | 21.91 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 24 | 12 |
| 446 | 21.97 | precipitation | 0.1 | 30 | > th | dose independent | sin | 2 | NA |
| 452 | 21.97 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 13 |
| 464 | 21.98 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 465 | 21.98 | precipitation | 0.1 | 30 | > th | dose dependent | sin | 2 | NA |
| 473 | 21.98 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 24 | 22 |
| 480 | 22.00 | radiation | 1.0 | 30 | < th | dose independent | rect. | 24 | 6 |
| 510 | 22.02 | wind | 1.0 | 270 | < th | dose independent | rect. | 15 | 11 |
| 531 | 22.04 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 13 |
| 534 | 22.05 | wind | 1.0 | 270 | < th | dose independent | rect. | 11 | 15 |
| 547 | 22.06 | humidity | 90.0 | 270 | > th | dose dependent | sin | 16 | NA |
| 563 | 22.07 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 11 |
| 573 | 22.08 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 5 |
| 632 | 22.12 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 24 | 2 |
| 676 | 22.15 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 678 | 22.15 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 680 | 22.15 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 735 | 22.15 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 737 | 22.15 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 739 | 22.15 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 819 | 22.17 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 22 |
| 820 | 22.17 | humidity | 90.0 | 10 | > th | dose dependent | sin | 8 | NA |
| 836 | 22.17 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 22 |
| 846 | 22.18 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 898 | 22.22 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 899 | 22.22 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 24 | 4 |
| 925 | 22.25 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 935 | 22.25 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 4 |
| 941 | 22.26 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 942 | 22.26 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 945 | 22.26 | temperature | 20.0 | 10 | > th | dose independent | rect. | 13 | 16 |
| 961 | 22.27 | wind | 1.0 | 10 | < th | dose independent | rect. | 3 | 2 |
| 986 | 22.29 | temperature | 20.0 | 90 | > th | dose independent | rect. | 11 | 17 |
| 989 | 22.29 | temperature | 20.0 | 10 | > th | dose independent | rect. | 10 | 19 |