BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0597800 Os02g0597800|AK072807
(585 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G40640.1 | chr5:16277345-16280258 FORWARD LENGTH=587 517 e-147
AT3G27390.1 | chr3:10133372-10136111 REVERSE LENGTH=589 491 e-139
AT4G12680.1 | chr4:7475104-7478174 FORWARD LENGTH=576 407 e-114
AT4G37030.1 | chr4:17452150-17454629 FORWARD LENGTH=570 331 7e-91
>AT5G40640.1 | chr5:16277345-16280258 FORWARD LENGTH=587
Length = 586
Score = 517 bits (1331), Expect = e-147, Method: Compositional matrix adjust.
Identities = 282/584 (48%), Positives = 356/584 (60%), Gaps = 14/584 (2%)
Query: 1 MEPPSGIRASAWSXXXXXXXXXXXXXXXXXXXXXXXPWAWLIMMIGISALVLGLWPMHVI 60
MEPP+GI AS W P L + IG SA++LGL P+H I
Sbjct: 1 MEPPTGILASLWQFILFIPYFTGLLLLGVIKGIVLCPLICLTVAIGNSAIILGLLPVHAI 60
Query: 61 WTYYCIIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAPVMATFDAVG 120
WT Y I FL+P+ ATFDAVG
Sbjct: 61 WTLYSIASAKQLGPILKIFLCLCVPLGVILWLVVSILGSVLGGAIYGFLSPIFATFDAVG 120
Query: 121 EGKERPLYHCFVDGTWSTITGSCTVVRDLKDLLLHSYFSIMDDLRFHAPPGGEPYEIRVL 180
EGK P +HCF DGTWST+ GS TVV D KD+ HSYFS MDDLR + YEIR+L
Sbjct: 121 EGKSNPFFHCFYDGTWSTVQGSFTVVCDFKDVCFHSYFSFMDDLR-TSTANRHYYEIRLL 179
Query: 181 DIPGALFAAACGFLVDGIMFTLIAFYKFPVMLFKGWKRLIEDLVGREGPFLETACVPFAG 240
IPGA+ A G LVD + +L+A K P MLFKGW RL DL+GREGPFLET CVP AG
Sbjct: 180 QIPGAVIVAVLGILVDFPVISLLALCKSPYMLFKGWHRLFHDLIGREGPFLETMCVPIAG 239
Query: 241 LAILLWPFAVFGAFLASIISSIPLGAFAAVVVYQESSLIMGLNYVISSVAIFDEYTNDVL 300
L ILLWP AV GA L S++SS+ LGA+ VV YQESS GL YV++SV+I+DEY+NDVL
Sbjct: 240 LVILLWPLAVVGAVLGSVVSSVFLGAYGGVVSYQESSFFFGLCYVVASVSIYDEYSNDVL 299
Query: 301 DMAPGSCFPRFKYRKNE--ASTE-GGSLSRPASFKDKQDGKKAPSRVTSFKGSFDEFNPF 357
DM GSCFPR YR+NE AST G LSRP SF K PSR S KG + P
Sbjct: 300 DMPEGSCFPRPIYRRNEEGASTAFSGGLSRPNSF------KTTPSRGGSNKGPMIDLKPL 353
Query: 358 KLLDHLFEECKHRGEVLVAEGVITPKDIEETKSGKIGIGVLNVGLPAYVILHALIRSAKA 417
LL+ LF EC+ GE++V +G+I KDIEE KS K G V++ GLPAY +LH L+RS K+
Sbjct: 354 DLLEALFVECRRHGEIMVTKGIINSKDIEEAKSSK-GSQVISFGLPAYSLLHELLRSIKS 412
Query: 418 NSDGLILSDG-SEITSDNRPKNTIFDWFFDPLMVIKEQIKAQNFTEEEEAYLKKRVLLTS 476
NS GL+L DG +EIT+ NRPK+ FDWF +P +++K+QI+A N +EEEE YL K VLL
Sbjct: 413 NSTGLLLGDGVTEITTRNRPKDAFFDWFLNPFLILKDQIEAANLSEEEEEYLGKLVLLFG 472
Query: 477 DPKRLK-EVVPHLPSSLNERKQAEIDALSRRLQGITRSISRYPTAKRRFDDLVRSLSEEL 535
D +RLK +V L E ++AE+DA +RRLQG+T+S+SRYPT +R F +LV+ LS +L
Sbjct: 473 DSERLKSSIVESESPPLTELRKAELDAFARRLQGLTKSVSRYPTFRRHFVELVKKLSNDL 532
Query: 536 ERTXXXXXXXXXXXXXKLRSGISRMLSQRSMGKRTSNRGDDREA 579
+ ++ +SR+ SQ+S K+TS+ G D+++
Sbjct: 533 DNKHNRFEGGSRSVPRPGKT-VSRIFSQKSFKKKTSSNGSDQDS 575
>AT3G27390.1 | chr3:10133372-10136111 REVERSE LENGTH=589
Length = 588
Score = 491 bits (1263), Expect = e-139, Method: Compositional matrix adjust.
Identities = 268/586 (45%), Positives = 354/586 (60%), Gaps = 14/586 (2%)
Query: 1 MEPPSGIRASAWSXXXXXXXXXXXXXXXXXXXXXXXPWAWLIMMIGISALVLGLWPMHVI 60
MEPP G RAS + P L++ IG SA++L L P+H++
Sbjct: 1 MEPPIGFRASLFQFLLFLPYFIGLLFLGFIKGIVLCPLVCLVVTIGNSAVILSLLPVHIV 60
Query: 61 WTYYCIIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAPVMATFDAVG 120
WT+Y I+ F +P+ ATFDAVG
Sbjct: 61 WTFYSIVSAKQVGPILKIFLCLCLPAAIILWPIVGILGSVLGGALYGFFSPIFATFDAVG 120
Query: 121 EGKERPLYHCFVDGTWSTITGSCTVVRDLKDLLLHSYFSIMDDLRFHAPPGGEPYEIRVL 180
EGK +HCF DGTWST+ S TVVRD KD+ HSYFS+MD+L+ + P + YEIR+L
Sbjct: 121 EGKPYQFFHCFYDGTWSTMQRSFTVVRDFKDVCFHSYFSLMDELK-QSCPDRKYYEIRLL 179
Query: 181 DIPGALFAAACGFLVDGIMFTLIAFYKFPVMLFKGWKRLIEDLVGREGPFLETACVPFAG 240
+PGAL + G LVD + +L+A K P MLFKGW RL DL+GREGPFLET CVP AG
Sbjct: 180 QLPGALVVSVLGILVDPPVISLVAICKSPYMLFKGWHRLFHDLIGREGPFLETMCVPIAG 239
Query: 241 LAILLWPFAVFGAFLASIISSIPLGAFAAVVVYQESSLIMGLNYVISSVAIFDEYTNDVL 300
LAILLWP AV GA + S+ISSI LGA+A VV YQESS GL Y+++SV+I+DEY+ D+L
Sbjct: 240 LAILLWPLAVTGAVIGSVISSIFLGAYAGVVSYQESSFYYGLCYIVASVSIYDEYSTDIL 299
Query: 301 DMAPGSCFPRFKYRKN--EASTEGGSLSRPASFKDKQDGKKAPSRVTSFKGSFDEFNPFK 358
D+ GSCFPR KYR+ E + G + R S K+ + RV + P
Sbjct: 300 DLPEGSCFPRPKYRRKDEEPTPFSGPVPRLGSVKNASSMRGGSVRVPMI-----DIKPLD 354
Query: 359 LLDHLFEECKHRGEVLVAEGVITPKDIEETKSGKIGIGVLNVGLPAYVILHALIRSAKAN 418
LL+ LF EC+ GEVL +G+I KDIEE +S K G V++VGLPAY +L+ ++RS KAN
Sbjct: 355 LLNELFVECRRYGEVLATKGLINSKDIEEARSSK-GSQVISVGLPAYGLLYEILRSVKAN 413
Query: 419 SDGLILSDG-SEITSDNRPKNTIFDWFFDPLMVIKEQIKAQNFTEEEEAYLKKRVLLTSD 477
S GL+LSDG +EIT+ NRPK+ FDWF +P +++KEQ+KA N +EEEE YL + VLL D
Sbjct: 414 SSGLLLSDGVTEITTMNRPKDVFFDWFLNPFLILKEQMKATNLSEEEEEYLGRLVLLFGD 473
Query: 478 PKRLK--EVVPHLPSSLNERKQAEIDALSRRLQGITRSISRYPTAKRRFDDLVRSLSEEL 535
P+RLK + P L ERK+AE+DA +RR+QG+T+++SRYPT +R F LV+ LSE+L
Sbjct: 474 PERLKSSNAISASP-PLTERKRAELDAFARRMQGLTKTVSRYPTFRRHFVALVKKLSEDL 532
Query: 536 E-RTXXXXXXXXXXXXXKLRSGISRMLSQRSMGKRTSNRGDDREAQ 580
+ + ISR+ SQRS ++ S G D+E+Q
Sbjct: 533 DLKDNNSAKDESITEPPAPVKIISRIFSQRSFRRKGSVNGSDQESQ 578
>AT4G12680.1 | chr4:7475104-7478174 FORWARD LENGTH=576
Length = 575
Score = 407 bits (1047), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/541 (40%), Positives = 304/541 (56%), Gaps = 9/541 (1%)
Query: 1 MEPPSGIRASAWSXXXXXXXXXXXXXXXXXXXXXXXPWAWLIMMIGISALVLGLWPMHVI 60
ME P G WS P + I+++G S +++GLWP H I
Sbjct: 1 MEVPKGFFEKLWSFVSFLPYFFLLLLLGVTKALIIGPISSAIILVGNSCVIIGLWPAHFI 60
Query: 61 WTYYCIIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAPVMATFDAVG 120
WTYYC+ R F P+MATF+AVG
Sbjct: 61 WTYYCLARTKRIGLVLKTLALVLFPLPLLLWPVAGIVGSLFGGIAYGFFTPLMATFEAVG 120
Query: 121 EGKERPLYHCFVDGTWSTITGSCTVVRDLKDLLLHSYFSIMDDLRFHAPPGGEPYEIRVL 180
E YHCFVDG++STI GSCTVV D D HSYFS MD+LR EP EI++
Sbjct: 121 ESVTSKCYHCFVDGSFSTIKGSCTVVTDFTDFCFHSYFSYMDELREMVSADVEPLEIKLS 180
Query: 181 DIPGALFAAACGFLVDGIMFTLIAFYKFPVMLFKGWKRLIEDLVGREGPFLETACVPFAG 240
+P L A+ G +VD ++ T +A YK P ML KGWKRL+EDLVGREGPFLE+ CVPFAG
Sbjct: 181 RLPSCLLASLIGVMVDVLLITAVAVYKSPYMLLKGWKRLLEDLVGREGPFLESVCVPFAG 240
Query: 241 LAILLWPFAVFGAFLASIISSIPLGAFAAVVVYQESSLIMGLNYVISSVAIFDEYTNDVL 300
LAILLWP AV GA +AS++SS LG ++ V+V+QE S MGLNY+I++V++FDEY ND+L
Sbjct: 241 LAILLWPLAVAGAVIASVLSSFFLGLYSGVIVHQEDSFRMGLNYIIAAVSLFDEYVNDLL 300
Query: 301 DMAPGSCFPRFKYRKNEASTEGGSL---SRPASFKDKQDGKKAPSRVT----SFKGSFDE 353
+ G+ PR YR + G + S+ K K+ V+ + K +
Sbjct: 301 YLREGTSLPRPCYRTKTETVHGKRILGESKNVDLKSKRSSSLGSKLVSEQSRTLKKAITL 360
Query: 354 FNPFKLLDHLFEECKHRGEVLVAEGVITPKDIEETKSGKIGIGVLNVGLPAYVILHALIR 413
+ P ++ + LF+ C+ G +L+ +G+I KD+EE K L + LPA+ +L L+
Sbjct: 361 YKPVQVWEWLFKSCEVNGRILLRDGLIDVKDVEECLV-KGNSKKLYIKLPAWTVLQCLLA 419
Query: 414 SAKANSDGLILSDGSEITSDNRPKNTIFDWFFDPLMVIKEQIKAQNFTEEEEAYLKKRVL 473
SAK+NS GL+++DG E+T N P++ +F W PL+++KEQIK TE+EE L+K V+
Sbjct: 420 SAKSNSSGLVITDGVELTELNSPRDKVFVWLVGPLLIMKEQIKNLKLTEDEEFCLRKLVM 479
Query: 474 LTSDPKRLKEVVPHLPSSLNERKQAEIDALSRRLQGITRSISRYPTAKRRFDDLVRSLSE 533
+ + + PSS RK A++ A+ RRLQG+ S+SR PT +RRF +LV+ L
Sbjct: 480 VCKNERTEDWDNTGFPSSDTVRK-AQLQAIIRRLQGMVASMSRIPTFRRRFMNLVKVLYI 538
Query: 534 E 534
E
Sbjct: 539 E 539
>AT4G37030.1 | chr4:17452150-17454629 FORWARD LENGTH=570
Length = 569
Score = 331 bits (848), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 182/509 (35%), Positives = 274/509 (53%), Gaps = 15/509 (2%)
Query: 37 PWAWLIMMIGISALVLGLWPMHVIWTYYCIIRXXXXXXXXXXXXXXXXXXXXXXXXXXXX 96
P A L +++G ++L L+P HV WT Y + +
Sbjct: 37 PIAGLTLIVGNVGVILCLFPAHVTWTIYAVAKTNRFDIPLKVAILVALPALFGIWLGLSL 96
Query: 97 XXXXXXXXXXXFLAPVMATFDAVGEGKE-RPLYHCFVDGTWSTITGSCTVVRDLKDLLLH 155
F P ++ F+A + E +HC VDGTW TI GSC VV D D H
Sbjct: 97 AISVLVGVGYGFFTPWISAFEAFRQDTESNKFFHCLVDGTWGTIKGSCIVVTDFADFCYH 156
Query: 156 SYFSIMDDLRFHAPPGGEPYEIRVLDIPGALFAAACGFLVDGIMFTLIAFYKFPVMLFKG 215
SY + +LR +P E +R++ +PG + G ++D +FT IA K P +L KG
Sbjct: 157 SYPLYLKELR-ESPVSDELQTLRLIHVPGCIIVGILGLVIDIPLFTAIAVIKSPYLLLKG 215
Query: 216 WKRLIEDLVGREGPFLETACVPFAGLAILLWPFAVFGAFLASIISSIPLGAFAAVVVYQE 275
W RL +D + REGPFLE AC+P AGL +LLWP V G L +I SSI +G + AVVV+QE
Sbjct: 216 WYRLAQDAINREGPFLEIACIPVAGLTVLLWPIVVIGFILVTIFSSIFVGLYGAVVVFQE 275
Query: 276 SSLIMGLNYVISSVAIFDEYTNDVLDMAPGSCFPRFKYR--KNEASTEGGSLSRPASFK- 332
S G++YVI+ V FDEYTND L + G+ FP+ +YR + S+E + P+
Sbjct: 276 RSFRRGVSYVIAVVGEFDEYTNDWLYLREGTIFPKPRYRMGRGSFSSEVSVIVHPSDVTR 335
Query: 333 -DKQDGKKAPSRV-------TSFKGSFDEFNPFKLLDHLFEECKHRGEVLVAEGVITPKD 384
+ AP+ + S + + E ++ +H+ + +G+ L+ V+TP D
Sbjct: 336 VNSSGSVDAPAMLVPSLVHSVSVREAIQEVRMVQIWEHMMGWFEMQGKELLDAEVLTPTD 395
Query: 385 IEETKSGKIG--IGVLNVGLPAYVILHALIRSAKANSDGLILSDGSEITSDNRPKNTIFD 442
+ E+ G+ G ++NVGLP+Y +LH L+ S KA G++L DGSE+T NRP++ D
Sbjct: 396 LYESLKGRHGNESSIINVGLPSYALLHTLLSSIKAGVHGVLLLDGSEVTHLNRPQDKFLD 455
Query: 443 WFFDPLMVIKEQIKAQNFTEEEEAYLKKRVLLTSDPKRLKEVVPHLPSSLNERKQAEIDA 502
W F+P+MV+K+QI+A E E YL+K VL + +R++ H + A+I
Sbjct: 456 WVFNPIMVLKDQIRALKLGESEVKYLEKVVLFGNHEQRMEAWDNHSNPPQENLRTAQIQG 515
Query: 503 LSRRLQGITRSISRYPTAKRRFDDLVRSL 531
+SRR+ G+ RS+S+ PT +RRF +V++L
Sbjct: 516 ISRRMMGMVRSVSKLPTYRRRFRQVVKAL 544
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.139 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,115,872
Number of extensions: 442390
Number of successful extensions: 1197
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1179
Number of HSP's successfully gapped: 5
Length of query: 585
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 481
Effective length of database: 8,255,305
Effective search space: 3970801705
Effective search space used: 3970801705
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)