Os02g0597700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ubiquitin domain containing protein.
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Os02g0597700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ubiquitin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 312.26 | 0.83 | 3.64 | 0.326 | 0.639 | -2.61 | -0.0142 | 5.22 | -0.293 | 4.37 | 0.1861 | 765 | -- | -- |
| 315.12 | 0.827 | 3.68 | 0.206 | 0.615 | -1.68 | -0.229 | -- | -0.264 | 4.13 | 0.0003213 | 307 | -- | -- |
| 312.26 | 0.823 | 3.64 | 0.326 | 0.639 | -2.61 | -- | 5.22 | -0.293 | 4.38 | 0.1833 | 764 | -- | -- |
| 315.2 | 0.827 | 3.68 | 0.226 | 0.617 | -1.59 | -- | -- | -0.258 | 4.18 | 0.02049 | 307 | -- | -- |
| 334.04 | 0.851 | 3.64 | 0.345 | -- | -2.7 | -- | 5.95 | -0.276 | -- | 0.0345 | 763 | -- | -- |
| 324.59 | 0.845 | 3.68 | 0.103 | 0.625 | -- | -0.195 | -- | -0.232 | 4.39 | -- | -- | -- | -- |
| 324.68 | 0.844 | 3.68 | 0.104 | 0.625 | -- | -- | -- | -0.231 | 4.46 | -- | -- | -- | -- |
| 335.81 | 0.853 | 3.69 | 0.251 | -- | -1.6 | -- | -- | -0.243 | -- | 0.0009276 | 307 | -- | -- |
| 316.5 | 0.829 | 3.69 | -- | 0.61 | -1.46 | -- | -- | -0.275 | 4.19 | 0.235 | 307 | -- | -- |
| 345.59 | 0.869 | 3.68 | 0.129 | -- | -- | -- | -- | -0.214 | -- | -- | -- | -- | -- |
| 324.97 | 0.843 | 3.68 | -- | 0.627 | -- | -- | -- | -0.243 | 4.46 | -- | -- | -- | -- |
| 337.42 | 0.856 | 3.69 | -- | -- | -1.47 | -- | -- | -0.267 | -- | 0.1638 | 307 | -- | -- |
| 346.03 | 0.868 | 3.68 | -- | -- | -- | -- | -- | -0.229 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 303.25 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 7 |
| 2 | 303.82 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 12 |
| 5 | 304.41 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 6 | 304.52 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 7 |
| 12 | 305.01 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 12 |
| 15 | 305.21 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 15 |
| 17 | 305.25 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 4 |
| 31 | 305.88 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 15 |
| 36 | 305.97 | wind | 1.0 | 43200 | < th | dose independent | sin | 5 | NA |
| 43 | 306.28 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 17 |
| 44 | 306.29 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 19 |
| 45 | 306.33 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 19 | 3 |
| 47 | 306.36 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 7 |
| 51 | 306.46 | wind | 1.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 56 | 306.57 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 19 | 6 |
| 57 | 306.57 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 19 | 15 |
| 63 | 306.64 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 19 | 3 |
| 71 | 306.79 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 72 | 306.80 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 19 | 7 |
| 81 | 306.93 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 18 | 10 |
| 82 | 306.93 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 94 | 307.04 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 107 | 307.24 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 12 |
| 113 | 307.34 | wind | 1.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 116 | 307.39 | wind | 1.0 | 43200 | > th | dose independent | sin | 5 | NA |
| 133 | 307.48 | humidity | 90.0 | 90 | < th | dose independent | rect. | 7 | 1 |
| 134 | 307.48 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 19 | 15 |
| 145 | 307.60 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 146 | 307.61 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 17 |
| 152 | 307.64 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 17 | 14 |
| 155 | 307.64 | wind | 1.0 | 43200 | < th | dose independent | rect. | 12 | 20 |
| 180 | 307.85 | humidity | 80.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 195 | 307.97 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 200 | 307.97 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 19 | 2 |
| 202 | 307.98 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 209 | 308.01 | wind | 1.0 | 43200 | < th | dose independent | rect. | 12 | 22 |
| 211 | 308.02 | wind | 1.0 | 90 | < th | dose dependent | rect. | 22 | 2 |
| 228 | 308.13 | wind | 1.0 | 43200 | > th | dose independent | rect. | 13 | 19 |
| 255 | 308.29 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 22 | 2 |
| 257 | 308.29 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 22 | 2 |
| 282 | 308.41 | humidity | 80.0 | 14400 | < th | dose dependent | sin | 12 | NA |
| 293 | 308.45 | humidity | 80.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 296 | 308.45 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 7 | 2 |
| 358 | 308.69 | wind | 1.0 | 43200 | < th | dose dependent | sin | 3 | NA |
| 371 | 308.73 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 18 | 13 |
| 445 | 308.99 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 446 | 309.01 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 476 | 309.09 | wind | 1.0 | 43200 | > th | dose independent | rect. | 15 | 19 |
| 485 | 309.12 | radiation | 10.0 | 90 | > th | dose independent | rect. | 7 | 1 |
| 487 | 309.12 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 16 | 16 |
| 491 | 309.16 | wind | 1.0 | 10 | < th | dose independent | rect. | 23 | 1 |
| 495 | 309.16 | wind | 1.0 | 10 | < th | dose dependent | rect. | 23 | 1 |
| 531 | 309.28 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 534 | 309.28 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 1 | 8 |
| 542 | 309.29 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 20 | 11 |
| 576 | 309.39 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 18 | 12 |
| 594 | 309.41 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 603 | 309.44 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 613 | 309.48 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 646 | 309.59 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 670 | 309.70 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 21 | 11 |
| 675 | 309.71 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 16 | 16 |
| 759 | 309.87 | wind | 1.0 | 90 | < th | dose independent | rect. | 22 | 2 |
| 769 | 309.87 | radiation | 10.0 | 14400 | < th | dose dependent | sin | 12 | NA |
| 776 | 309.88 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 809 | 309.96 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 10 | 7 |
| 845 | 310.00 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 13 | 19 |
| 884 | 310.04 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 887 | 310.04 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 13 | 8 |
| 888 | 310.04 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 15 | 13 |
| 896 | 310.04 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 24 | 9 |
| 900 | 310.05 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 902 | 310.05 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 926 | 310.06 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 15 | 16 |
| 928 | 310.07 | radiation | 20.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 935 | 310.08 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 15 | 22 |
| 938 | 310.09 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 944 | 310.10 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 15 | 2 |