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Os02g0596000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Rhodanese-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.6 (0.0398) R2 : 0.662
β1 : -1.83 (0.148) R2dD : 0.126 R2D : 0.113
β2 : 2.08 (0.103) R2dC : 0.346 R2C : 0.445
β3 : -1.01 (0.123) R2dE : 0.062 R2E : 0.137
β4 : 3.03 (0.369) R2dD*C : 0.0478 R2D*C : 0.0451
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0309 (0.0875) R2dN8 : 0.000333 R2N8 : -0.00371
σ : 0.74
deviance : 252.31
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C
peak time of C : 22.5
E
wheather : temperature
threshold : 21.1
memory length : 694
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 6.2
open length of G : 1.23

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
243.78 0.734 12.6 -1.58 2.04 -1.09 1.81 -1.66 -0.00284 22.5 21 694 6.1 1.22
252.31 0.74 12.6 -1.83 2.08 -1.01 3.03 -- -0.0309 22.5 21.1 694 6.2 1.23
255.73 0.745 12.6 -1.51 2.08 -1.02 -- -1.95 0.00914 22.4 21.06 673 6.17 1.28
286.95 0.789 12.6 -1.87 2.05 -0.907 -- -- 0.00698 22.5 21.1 700 6.19 1
285.99 0.788 12.5 -1.73 -- -2.16 -- -1.86 0.0843 -- 30.53 604 2.28 7.28
288.71 0.797 12.5 -1.67 2.36 -- 2.64 -- 0.119 22.8 -- -- -- --
317.92 0.835 12.6 -1.78 2.35 -- -- -- 0.111 22.8 -- -- -- --
313.67 0.825 12.5 -1.79 -- -2.17 -- -- 0.0836 -- 30.6 603 2.24 7.2
383.2 0.912 12.5 -- 2.06 -0.696 -- -- 0.127 22.5 21.4 693 6.27 0.699
659.12 1.2 12.5 -1.73 -- -- -- -- 0.125 -- -- -- -- --
401.11 0.937 12.5 -- 2.33 -- -- -- 0.309 22.8 -- -- -- --
397.76 0.929 12.5 -- -- -2.19 -- -- 0.269 -- 30.5 632 1.64 7.62
737.89 1.27 12.4 -- -- -- -- -- 0.317 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 250.17 wind 3 43200 < th dose independent rect. 23 1
2 250.24 humidity 90 10 < th dose dependent sin 3 NA
9 252.39 wind 3 43200 > th dose independent rect. 23 1
11 252.94 wind 1 4320 < th dose dependent rect. 11 2
12 252.98 temperature 20 720 < th dose independent rect. 6 1
17 254.08 humidity 80 14400 < th dose dependent rect. 4 3
19 254.29 humidity 50 30 > th dose dependent sin 2 NA
24 255.05 atmosphere 1000 10 < th dose independent rect. 10 6
28 255.20 humidity 80 14400 < th dose independent rect. 20 11
29 255.26 humidity 80 14400 < th dose dependent rect. 21 10
30 255.30 humidity 70 14400 > th dose dependent rect. 4 1
50 256.09 humidity 80 14400 < th dose dependent rect. 22 1
54 256.29 wind 1 43200 > th dose dependent rect. 23 1
56 256.30 humidity 80 14400 < th dose independent rect. 22 11
70 256.56 humidity 90 4320 > th dose dependent rect. 5 2
84 256.67 wind 5 43200 < th dose dependent rect. 23 1
86 256.68 humidity 80 14400 > th dose independent rect. 20 11
92 256.74 humidity 80 270 < th dose dependent rect. 5 5
93 256.74 humidity 80 270 < th dose dependent rect. 3 7
106 256.82 atmosphere 1000 90 > th dose dependent sin 21 NA
110 256.84 temperature 25 720 < th dose dependent rect. 5 8
137 257.19 temperature 25 720 < th dose dependent rect. 4 13
141 257.24 humidity 80 14400 > th dose independent rect. 22 11
157 257.33 humidity 80 14400 > th dose independent rect. 1 7
162 257.43 humidity 80 14400 > th dose independent rect. 5 1
180 257.55 humidity 90 10 < th dose dependent rect. 6 10
187 257.61 humidity 80 14400 > th dose independent rect. 2 2
192 257.68 temperature 25 720 < th dose dependent sin 2 NA
200 257.72 atmosphere 1015 90 < th dose dependent sin 22 NA
202 257.73 atmosphere 1000 270 > th dose dependent rect. 6 9
206 257.78 atmosphere 1005 270 < th dose dependent rect. 8 6
211 257.86 humidity 80 14400 > th dose independent rect. 2 4
214 257.90 humidity 80 14400 < th dose independent rect. 23 1
238 258.07 atmosphere 1000 10 < th dose independent rect. 10 10
275 258.36 humidity 80 14400 < th dose independent rect. 2 5
292 258.42 atmosphere 1005 270 < th dose dependent rect. 9 4
293 258.42 humidity 90 10 < th dose dependent rect. 24 16
314 258.55 atmosphere 1015 10 < th dose dependent sin 21 NA
332 258.64 wind 3 43200 < th dose dependent rect. 10 1
337 258.66 atmosphere 1000 90 > th dose dependent rect. 8 9
422 259.12 humidity 80 10 > th dose independent sin 1 NA
446 259.21 atmosphere 1015 270 < th dose dependent rect. 8 11
447 259.21 atmosphere 1000 270 > th dose dependent rect. 7 15
466 259.32 humidity 90 10 < th dose dependent rect. 22 18
481 259.43 humidity 90 10 < th dose dependent rect. 6 6
484 259.44 atmosphere 1000 10 > th dose dependent rect. 8 8
523 259.67 humidity 80 10 < th dose dependent rect. 22 14
526 259.68 humidity 80 10 < th dose dependent rect. 20 16
528 259.69 humidity 90 10 < th dose dependent rect. 2 10
595 259.87 atmosphere 1000 10 < th dose independent sin 21 NA
651 260.09 wind 1 4320 < th dose independent rect. 11 2
657 260.12 atmosphere 1000 30 > th dose independent sin 22 NA
663 260.14 wind 9 14400 > th dose dependent rect. 4 10
676 260.18 wind 9 14400 > th dose dependent rect. 1 13
753 260.39 humidity 90 10 < th dose dependent rect. 20 20
785 260.49 humidity 90 10 < th dose dependent rect. 22 20
829 260.63 humidity 60 270 < th dose independent rect. 8 3
876 260.72 atmosphere 1005 10 < th dose dependent rect. 10 6
890 260.77 temperature 20 720 > th dose independent rect. 2 5
904 260.83 temperature 25 720 < th dose dependent rect. 6 1
909 260.84 humidity 90 10 < th dose dependent rect. 20 22
928 260.92 humidity 90 10 < th dose dependent rect. 6 17
934 260.95 humidity 80 14400 < th dose independent sin 10 NA
951 260.98 humidity 90 10 < th dose dependent rect. 6 19
976 261.06 wind 3 14400 > th dose independent rect. 2 1