FiT-DB / Search/ Help/ Sample detail

Os02g0591900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0206) R2 : 0.836
β1 : -0.848 (0.0753) R2dD : 0.0473 R2D : 0.0173
β2 : 2.49 (0.0537) R2dC : 0.775 R2C : 0.74
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.519 (0.0439) R2dN8 : 0.0674 R2N8 : 0.0202
σ : 0.387
deviance : 68.22
__
_____
C
peak time of C : 5.82
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
60.09 0.364 11.1 -0.613 2.5 -0.564 0.403 0.0242 -0.39 5.77 20.41 1233 -- --
60.1 0.361 11.1 -0.617 2.5 -0.567 0.405 -- -0.391 5.77 20.43 1232 -- --
60.49 0.362 11.1 -0.604 2.5 -0.571 -- 0.0438 -0.388 5.76 20.4 1232 -- --
60.49 0.362 11.1 -0.612 2.5 -0.575 -- -- -0.391 5.76 20.46 1232 -- --
229.15 0.705 11 -0.518 -- -1.71 -- 1.61 -0.159 -- 28.2 448 -- --
67.55 0.385 11.1 -0.851 2.48 -- 0.525 -- -0.517 5.83 -- -- -- --
68.22 0.387 11.1 -0.848 2.49 -- -- -- -0.519 5.82 -- -- -- --
221.38 0.693 11 -0.368 -- -1.62 -- -- -0.0687 -- 26.5 352 -- --
69.06 0.387 11 -- 2.57 -0.817 -- -- -0.296 5.71 19.94 1240 -- --
389.14 0.922 11.1 -0.771 -- -- -- -- -0.461 -- -- -- -- --
87.17 0.437 11.1 -- 2.47 -- -- -- -0.425 5.84 -- -- -- --
223.43 0.696 11 -- -- -1.65 -- -- 0.0186 -- 26.31 357 -- --
404.84 0.939 11.1 -- -- -- -- -- -0.376 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 53.19 temperature 10.0 270 > th dose dependent rect. 21 18
2 53.47 temperature 20.0 270 > th dose independent rect. 11 15
5 53.91 temperature 20.0 270 > th dose independent rect. 21 5
6 54.13 precipitation 0.1 270 < th dose independent rect. 2 9
7 54.13 precipitation 0.1 270 < th dose dependent rect. 2 9
8 54.18 temperature 20.0 270 > th dose independent rect. 21 18
15 54.51 temperature 20.0 90 > th dose independent rect. 23 18
30 55.19 temperature 30.0 270 < th dose independent rect. 2 9
31 55.20 temperature 20.0 10 > th dose independent rect. 12 16
32 55.22 wind 9.0 270 < th dose independent rect. 22 17
33 55.24 temperature 10.0 270 > th dose dependent rect. 7 9
34 55.27 wind 7.0 270 < th dose independent rect. 15 7
35 55.27 humidity 70.0 270 > th dose dependent rect. 21 5
36 55.28 temperature 10.0 270 > th dose independent rect. 2 9
37 55.28 atmosphere 995.0 270 > th dose independent rect. 2 9
38 55.28 atmosphere 1015.0 270 < th dose independent rect. 2 9
39 55.28 temperature 10.0 270 > th dose independent rect. 11 15
42 55.34 atmosphere 1015.0 270 < th dose independent rect. 22 17
43 55.36 precipitation 0.1 270 < th dose independent rect. 15 7
44 55.36 precipitation 0.1 270 < th dose dependent rect. 15 7
49 55.41 wind 9.0 270 < th dose independent rect. 11 15
51 55.45 wind 9.0 270 < th dose independent rect. 2 9
58 55.51 atmosphere 995.0 270 > th dose independent rect. 22 17
62 55.57 temperature 10.0 270 > th dose independent rect. 15 7
70 55.64 humidity 50.0 270 > th dose independent rect. 22 17
76 55.71 radiation 40.0 270 < th dose independent rect. 15 7
80 55.72 wind 1.0 270 > th dose independent rect. 15 7
81 55.72 humidity 50.0 270 > th dose independent rect. 2 9
99 56.09 humidity 50.0 270 > th dose independent rect. 21 19
118 56.31 wind 9.0 270 < th dose dependent rect. 15 6
137 56.37 temperature 20.0 10 > th dose independent rect. 22 20
140 56.38 radiation 10.0 10 < th dose dependent rect. 22 19
152 56.43 radiation 40.0 270 < th dose independent rect. 2 9
153 56.44 atmosphere 1015.0 90 < th dose dependent rect. 23 18
168 56.54 precipitation 0.1 270 < th dose independent rect. 22 17
169 56.54 precipitation 0.1 270 < th dose dependent rect. 22 17
175 56.61 humidity 80.0 270 > th dose dependent rect. 23 2
180 56.66 atmosphere 995.0 270 > th dose independent rect. 11 15
190 56.76 precipitation 0.1 270 < th dose independent rect. 3 18
191 56.76 precipitation 0.1 270 < th dose dependent rect. 3 18
192 56.77 precipitation 0.1 270 < th dose independent rect. 11 15
194 56.77 precipitation 0.1 270 < th dose dependent rect. 11 15
200 56.83 atmosphere 1000.0 270 > th dose independent rect. 21 6
211 56.94 atmosphere 1000.0 270 > th dose independent rect. 22 4
214 56.96 radiation 40.0 270 < th dose dependent rect. 15 6
216 56.97 atmosphere 1015.0 270 < th dose independent rect. 15 6
229 57.08 temperature 30.0 90 < th dose independent rect. 4 8
230 57.09 atmosphere 995.0 270 > th dose independent rect. 15 7
240 57.14 radiation 1.0 90 < th dose independent rect. 21 19
253 57.20 radiation 40.0 270 < th dose independent rect. 3 18
271 57.28 atmosphere 1010.0 270 < th dose independent rect. 9 7
277 57.30 atmosphere 995.0 270 > th dose independent rect. 16 5
278 57.30 temperature 10.0 270 > th dose dependent rect. 21 6
293 57.35 humidity 50.0 90 > th dose independent rect. 17 6
322 57.44 precipitation 0.1 270 < th dose independent rect. 2 20
326 57.44 precipitation 0.1 270 < th dose dependent rect. 2 20
355 57.56 wind 7.0 270 < th dose independent rect. 16 17
358 57.56 temperature 10.0 270 > th dose dependent rect. 9 17
359 57.57 atmosphere 1010.0 270 < th dose independent rect. 11 4
377 57.64 precipitation 0.1 270 < th dose independent rect. 16 17
378 57.64 precipitation 0.1 270 < th dose dependent rect. 16 17
379 57.65 humidity 80.0 270 > th dose independent rect. 22 4
390 57.67 wind 7.0 270 < th dose independent rect. 17 3
391 57.67 precipitation 0.1 270 < th dose independent rect. 17 3
394 57.67 precipitation 0.1 270 < th dose dependent rect. 17 3
397 57.68 humidity 80.0 270 > th dose independent rect. 21 6
405 57.70 temperature 20.0 270 > th dose independent rect. 9 7
410 57.71 atmosphere 1015.0 10 < th dose dependent rect. 24 17
422 57.74 wind 1.0 270 > th dose independent rect. 17 3
427 57.75 temperature 20.0 270 > th dose independent rect. 11 4
448 57.83 radiation 40.0 270 < th dose dependent rect. 16 17
451 57.84 atmosphere 1015.0 270 < th dose independent rect. 11 15
470 57.90 radiation 30.0 270 < th dose independent rect. 16 17
472 57.90 wind 9.0 270 < th dose independent rect. 20 21
481 57.93 temperature 30.0 270 < th dose independent rect. 21 6
482 57.93 humidity 50.0 270 > th dose independent rect. 21 6
486 57.93 radiation 1.0 270 < th dose independent rect. 21 6
492 57.93 temperature 10.0 270 > th dose independent rect. 3 18
493 57.93 precipitation 0.1 270 < th dose independent rect. 15 20
494 57.93 radiation 1.0 270 < th dose dependent rect. 21 6
499 57.93 precipitation 0.1 270 < th dose dependent rect. 15 20
522 57.98 radiation 10.0 10 < th dose dependent rect. 22 16
530 58.00 temperature 10.0 270 > th dose independent rect. 17 3
531 58.00 atmosphere 1015.0 270 < th dose independent rect. 17 3
532 58.00 radiation 20.0 270 < th dose independent rect. 17 3
535 58.00 humidity 90.0 270 < th dose independent rect. 9 7
536 58.00 humidity 50.0 270 > th dose independent rect. 11 15
549 58.02 wind 9.0 270 < th dose independent rect. 21 6
564 58.05 radiation 20.0 1440 < th dose dependent rect. 11 1
568 58.06 precipitation 0.1 270 < th dose independent rect. 21 6
571 58.06 precipitation 0.1 270 < th dose dependent rect. 21 6
634 58.18 atmosphere 1015.0 270 < th dose independent rect. 21 6
654 58.21 radiation 20.0 10 < th dose dependent rect. 17 7
656 58.21 atmosphere 995.0 10 > th dose dependent rect. 17 20
659 58.22 wind 9.0 270 < th dose independent rect. 3 18
694 58.28 wind 9.0 270 < th dose independent rect. 9 7
717 58.31 wind 9.0 10 < th dose independent rect. 24 17
731 58.34 humidity 50.0 10 > th dose independent rect. 24 17
746 58.36 atmosphere 1015.0 270 < th dose independent rect. 3 18
755 58.37 wind 9.0 270 < th dose independent rect. 11 4
774 58.41 radiation 20.0 1440 < th dose independent rect. 11 2
783 58.43 humidity 50.0 270 > th dose independent rect. 17 3
787 58.44 humidity 50.0 10 > th dose independent rect. 17 7
798 58.45 precipitation 0.1 270 < th dose independent rect. 16 15
800 58.45 precipitation 0.1 270 < th dose dependent rect. 16 15
801 58.46 humidity 50.0 270 > th dose independent rect. 9 7
820 58.49 wind 9.0 10 < th dose independent rect. 17 7
823 58.49 radiation 40.0 270 < th dose independent rect. 15 20
825 58.50 atmosphere 995.0 270 > th dose independent rect. 17 3
836 58.52 radiation 1.0 90 < th dose independent rect. 22 12
841 58.53 atmosphere 1015.0 270 < th dose independent rect. 22 4
846 58.54 radiation 1.0 90 < th dose independent rect. 22 10
862 58.55 humidity 50.0 270 > th dose independent rect. 11 4
863 58.55 humidity 90.0 270 < th dose independent rect. 11 4
864 58.55 atmosphere 995.0 270 > th dose independent rect. 11 4
880 58.57 radiation 10.0 10 < th dose dependent rect. 22 12
884 58.58 temperature 20.0 1440 > th dose independent rect. 20 5
893 58.59 precipitation 0.1 270 < th dose independent rect. 9 7
897 58.59 precipitation 0.1 270 < th dose dependent rect. 9 7
901 58.60 temperature 20.0 1440 > th dose independent rect. 21 3
903 58.60 temperature 30.0 270 < th dose independent rect. 22 4
904 58.60 humidity 50.0 270 > th dose independent rect. 22 4
908 58.60 radiation 1.0 270 < th dose independent rect. 22 4
915 58.60 radiation 10.0 10 < th dose independent rect. 17 7
922 58.60 temperature 10.0 270 > th dose independent rect. 2 20
924 58.60 radiation 1.0 270 < th dose dependent rect. 22 4
935 58.61 temperature 10.0 270 > th dose independent rect. 16 17
943 58.62 temperature 10.0 270 > th dose independent rect. 15 20
944 58.62 precipitation 0.1 270 < th dose independent rect. 14 23
947 58.62 precipitation 0.1 270 < th dose dependent rect. 14 23
948 58.63 wind 9.0 270 < th dose independent rect. 22 4
950 58.63 atmosphere 995.0 270 > th dose independent rect. 9 7
953 58.63 wind 9.0 270 < th dose independent rect. 15 20
959 58.64 precipitation 0.1 270 < th dose independent rect. 11 4
964 58.64 precipitation 0.1 270 < th dose dependent rect. 11 4
975 58.66 precipitation 0.1 270 < th dose independent rect. 22 4
978 58.66 precipitation 0.1 270 < th dose dependent rect. 22 4
988 58.68 temperature 10.0 10 > th dose independent rect. 17 7
994 58.68 temperature 10.0 10 > th dose independent rect. 24 17