Os02g0577100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : RINGv domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0577100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : RINGv domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.91 | 0.49 | 8.14 | -1.77 | 4.14 | -3.79 | 0.0707 | 0.0557 | 0.0401 | 15.3 | 9.953 | 728 | 23.9 | -- |
| 108.9 | 0.486 | 8.15 | -1.78 | 4.17 | -3.79 | 0.0993 | -- | 0.0379 | 15.4 | 9.977 | 729 | 23.9 | -- |
| 108.91 | 0.486 | 8.14 | -1.76 | 4.18 | -3.81 | -- | 0.127 | 0.0437 | 15.3 | 9.832 | 730 | 23.9 | -- |
| 108.93 | 0.486 | 8.15 | -1.78 | 4.16 | -3.78 | -- | -- | 0.0383 | 15.3 | 9.914 | 731 | 23.9 | -- |
| 170.01 | 0.607 | 8.14 | -2.02 | -- | -3.04 | -- | 1.27 | -0.0879 | -- | 6.894 | 77 | 1.57 | -- |
| 201.2 | 0.665 | 8.27 | -2.42 | 2.65 | -- | -0.557 | -- | -0.408 | 17.3 | -- | -- | -- | -- |
| 201.98 | 0.666 | 8.27 | -2.42 | 2.65 | -- | -- | -- | -0.41 | 17.3 | -- | -- | -- | -- |
| 168.27 | 0.607 | 8.16 | -2.16 | -- | -3.08 | -- | -- | -0.14 | -- | 7.39 | 2 | 1.06 | -- |
| 183.61 | 0.631 | 8.03 | -- | 4.87 | -5.72 | -- | -- | 0.347 | 14.3 | 4.942 | 828 | 1.12 | -- |
| 567.23 | 1.11 | 8.24 | -2.51 | -- | -- | -- | -- | -0.476 | -- | -- | -- | -- | -- |
| 355.77 | 0.882 | 8.21 | -- | 2.69 | -- | -- | -- | -0.141 | 17.3 | -- | -- | -- | -- |
| 198.76 | 0.657 | 8.05 | -- | -- | -4.75 | -- | -- | 0.361 | -- | -25.93 | 3383 | 4.67 | -- |
| 732.92 | 1.26 | 8.18 | -- | -- | -- | -- | -- | -0.198 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 102.88 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 17 |
| 10 | 108.06 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 14 |
| 19 | 108.96 | temperature | 10 | 720 | > th | dose dependent | sin | 6 | NA |
| 22 | 109.08 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 16 |
| 26 | 109.52 | temperature | 15 | 720 | > th | dose dependent | rect. | 2 | 11 |
| 45 | 110.38 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 51 | 110.63 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 4 |
| 65 | 111.33 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 1 |
| 68 | 111.51 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 7 |
| 88 | 112.33 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 148 | 114.13 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 13 |
| 249 | 117.01 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 10 |
| 550 | 123.08 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 3 |