BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0577100 Os02g0577100|AK071239
(250 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G47550.3 | chr3:17523841-17525278 FORWARD LENGTH=289 234 2e-62
AT5G62460.1 | chr5:25075545-25077072 FORWARD LENGTH=308 218 2e-57
AT1G14260.1 | chr1:4873200-4874430 FORWARD LENGTH=266 191 2e-49
AT2G02960.5 | chr2:862440-863980 REVERSE LENGTH=276 172 1e-43
AT5G38070.1 | chr5:15190254-15191588 FORWARD LENGTH=260 125 2e-29
AT2G01275.1 | chr2:142610-143809 REVERSE LENGTH=260 125 2e-29
AT4G02075.1 | chr4:913555-916414 REVERSE LENGTH=219 94 5e-20
AT1G02610.1 | chr1:553181-555854 REVERSE LENGTH=222 92 2e-19
AT4G34100.1 | chr4:16330590-16334864 FORWARD LENGTH=1109 59 2e-09
AT4G32670.1 | chr4:15759527-15762847 REVERSE LENGTH=861 59 2e-09
>AT3G47550.3 | chr3:17523841-17525278 FORWARD LENGTH=289
Length = 288
Score = 234 bits (598), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/233 (56%), Positives = 150/233 (64%), Gaps = 8/233 (3%)
Query: 18 AGEEETGALIGMVECRICQEEDLAKNLESPCACSGSLKYAHRECVQRWCNEKGDIICEIC 77
A EEE L+ VECRICQEED KNLE+PCAC+GSLKYAHR+CVQRWCNEKGDI CEIC
Sbjct: 57 ADEEE--PLLQSVECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEIC 114
Query: 78 HVSYKPGYTAPPQVHHDETTIEISSGDWSISGNRLDLHDPRILAMAAAQHRLLEDEYDEY 137
H Y+ GYTAPP DET I I DW +G LDL DPRILAMAAA+ LE +YDEY
Sbjct: 115 HQPYQHGYTAPPPPPPDETIIHIGD-DWE-NGVPLDLTDPRILAMAAAERHFLEADYDEY 172
Query: 138 TATNNNAAAFCRXXXXXXXXXXXXXXXXXXXXX-DDEDDASAIFSLFLLRAAGFLLPCYI 196
+ N++ AAFCR DDEDD +A FSLFLLRAAGFLLPCYI
Sbjct: 173 SENNSSGAAFCRSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCYI 232
Query: 197 MAWAISIMXXXXXXXEEAMLLPTEVAIILHRNG---RTMQFAVAPESPTTPHP 246
MAWAI I+ E A L EV ++H G R + FAVAP+ P + P
Sbjct: 233 MAWAIGILQRRRQRQEAAALAAAEVTFMIHGGGPQRRGLHFAVAPQPPISNVP 285
>AT5G62460.1 | chr5:25075545-25077072 FORWARD LENGTH=308
Length = 307
Score = 218 bits (555), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/236 (54%), Positives = 149/236 (63%), Gaps = 12/236 (5%)
Query: 20 EEETGALIGMVECRICQEEDLAKNLESPCACSGSLKYAHRECVQRWCNEKGDIICEICHV 79
++E LI VECRICQEED KNLESPC+CSGSLKYAHR+CVQRWCNEKGD CEICH
Sbjct: 66 DDEEEPLIQSVECRICQEEDSVKNLESPCSCSGSLKYAHRKCVQRWCNEKGDTTCEICHK 125
Query: 80 SYKPGYTAPPQVHHDETTIEISSGDWSISGNRLDLHDPRILAMAAAQHRLLEDEYDEYTA 139
SY+PGYTAPP D+T I+I DW +G LDL+DPRILAMAAA+ + +YDEY
Sbjct: 126 SYQPGYTAPPPPPADDTIIDIGE-DWG-NGVHLDLNDPRILAMAAAERHFFDADYDEYAD 183
Query: 140 TNNNAAAFCRX---XXXXXXXXXXXXXXXXXXXXDDEDDASAIFSLFLLRAAGFLLPCYI 196
+N++ AAFCR D+EDD SA F LF+LRAAGFLLPCYI
Sbjct: 184 SNSSGAAFCRSAALILMALLLLRHALNLTNNNSDDEEDDPSAFFFLFMLRAAGFLLPCYI 243
Query: 197 MAWAISIMXXXXXXXEEAMLLPTEVAIILHR-------NGRTMQFAVAPESPTTPH 245
MAWAISI+ E A L EVA +LH + FAV PE + PH
Sbjct: 244 MAWAISILQRRRQRQEAAALAAAEVAFMLHSGGGGGGQRRGGLHFAVPPELISNPH 299
>AT1G14260.1 | chr1:4873200-4874430 FORWARD LENGTH=266
Length = 265
Score = 191 bits (486), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 138/208 (66%), Gaps = 7/208 (3%)
Query: 21 EETGALIGMVECRICQEEDLAKNLESPCACSGSLKYAHRECVQRWCNEKGDIICEICHVS 80
EE +LI ECRICQ+E KNLESPCAC+GSLKYAHR+CVQRWCNEKG+ ICEICH
Sbjct: 46 EEEDSLISSAECRICQDECDIKNLESPCACNGSLKYAHRKCVQRWCNEKGNTICEICHQP 105
Query: 81 YKPGYTA-PPQVHHDETTIEISSGDWSISGNRLDLHDPRILAMAAAQHRLLEDEYDEYTA 139
Y+ GYT+ PP +ETTI+I G W ISG LDL DPR+LA+A A+ ++LE EYD+YTA
Sbjct: 106 YQAGYTSPPPPPQSEETTIDIGGG-WRISG--LDLDDPRLLAIAEAERQILESEYDDYTA 162
Query: 140 TNNNAAAFCRXXXXXXXXXXXX--XXXXXXXXXDDEDDASAIFSLFLLRAAGFLLPCYIM 197
++ + AAF R ++DD S+I SLFLLRAA FLLPCYIM
Sbjct: 163 SDTSGAAFFRSAALILMTLLLLRHALTIPDYSDSEDDDPSSILSLFLLRAASFLLPCYIM 222
Query: 198 AWAISIMXXXXXXXEEAMLLPTEVAIIL 225
A AISI+ +EA L T A++L
Sbjct: 223 ASAISIL-HRRRQRQEAADLATRFALVL 249
>AT2G02960.5 | chr2:862440-863980 REVERSE LENGTH=276
Length = 275
Score = 172 bits (436), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 101/129 (78%), Gaps = 4/129 (3%)
Query: 22 ETGALIGMVECRICQEEDLAKNLESPCACSGSLKYAHRECVQRWCNEKGDIICEICHVSY 81
E LI ECRIC +E +NLESPCACSGSLKYAHR+CVQRWCNEKG+IICEICH Y
Sbjct: 33 ENEPLIVSGECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQPY 92
Query: 82 KPGYTA-PPQVHHDETTIEISSGDWSISGNRLDLHDPRILAMAAAQHRLLEDEYDEYTAT 140
+PGYTA PP + +ETTI+I G W+ISG LD+HDPR+LA+A A+ R LE EY EYTA+
Sbjct: 93 QPGYTAPPPPLQPEETTIDI-GGGWTISG--LDVHDPRLLAIAEAERRYLESEYVEYTAS 149
Query: 141 NNNAAAFCR 149
+ + AAFCR
Sbjct: 150 SASGAAFCR 158
>AT5G38070.1 | chr5:15190254-15191588 FORWARD LENGTH=260
Length = 259
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 95/177 (53%), Gaps = 9/177 (5%)
Query: 29 MVECRICQEEDLAKNLESPCACSGSLKYAHRECVQRWCNEKGDIICEICHVSYKPGYTAP 88
V+CRIC +ED N+++PC+CSG+LK+AH CVQRWCNEKGD +CEIC YKPGYTAP
Sbjct: 51 FVQCRICHDEDEDTNMDTPCSCSGTLKFAHHNCVQRWCNEKGDTVCEICRQQYKPGYTAP 110
Query: 89 PQVHHDETTIEISSG-DWSISGNRLDLHDPRILAMAAAQHRLLEDEYDEYTATNNNAAAF 147
Q+ H T I ++ G DW I G LDL +P L A +D++D Y+ + +
Sbjct: 111 RQLFH-YTGISMNFGSDWGIEG--LDLRNPYFLTWGDA-----DDDHDLYSFHSPTSLIC 162
Query: 148 CRXXXXXXXXXXXXXXXXXXXXXDDEDDASAIFSLFLLRAAGFLLPCYIMAWAISIM 204
CR +D + + L L+R G LL Y+ + ++
Sbjct: 163 CRLIALLFVLLLFLRHSLPVLLGGVDDFSITLLMLPLVRTLGILLIAYVFFKSFIVI 219
>AT2G01275.1 | chr2:142610-143809 REVERSE LENGTH=260
Length = 259
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Query: 27 IGMVECRICQEEDLAKNLESPCACSGSLKYAHRECVQRWCNEKGDIICEICHVSYKPGYT 86
+ M ECRIC +EDL N+E+PC+CSGS+KYAHR CVQRWCNEKGD CEICH +KP YT
Sbjct: 54 LSMAECRICHDEDLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYT 113
Query: 87 APPQVHHDETTIEISSGDWSISGNRLDLHDPRILAMAAAQHRLLEDEYDEYTATNNNAAA 146
APP + G+W IS + R + + A ++ Y ++ +
Sbjct: 114 APPPLLELGHVPLHFRGNWGISQR-----EHRFITVVPADSTFIDQPYP---LSSTTSFI 165
Query: 147 FCRXXXXXXXXXXXXXXXXXXXXXDDEDDASAIFSLFLLRAAGFLLPCYIMAWAIS 202
CR +F+L LR G +LP Y++ A++
Sbjct: 166 CCRSLVLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVA 221
>AT4G02075.1 | chr4:913555-916414 REVERSE LENGTH=219
Length = 218
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 88/187 (47%), Gaps = 19/187 (10%)
Query: 21 EETGALIGMVECRICQEEDLAKNLESPCACSGSLKYAHRECVQRWCNEKGDIICEICHVS 80
++T + + + CRIC EE+ E PCACSG++K+AHR C+QRWCNEKG+ CEIC
Sbjct: 9 DDTKSKVRITRCRICHEEEEESFFEVPCACSGTVKFAHRNCIQRWCNEKGNTTCEICLQV 68
Query: 81 YKPGYTA---PPQVHHDETTIEISSGDWSISGNRLDLHDPRILAMAAAQHRLLEDEYDEY 137
YK GYTA ++ E TI ++ S + + E + +
Sbjct: 69 YKDGYTAVLKQSKLIEQEVTIRVNGRRRRRSRRLVSIA---------------ESDISQC 113
Query: 138 TATNNNAAAFCRXXXXXXXXXXXXXXXXXXXXXDDEDDASAIFSLFLLRAAGFLLPCYIM 197
+ + A+FCR +E S +F++ L+A G LLP +I+
Sbjct: 114 NSVADRGASFCRSLTFTLSVFLLMKHTFDVIYGTEEYPFS-VFTVLTLKAIGILLPMFII 172
Query: 198 AWAISIM 204
IS +
Sbjct: 173 IRTISTI 179
>AT1G02610.1 | chr1:553181-555854 REVERSE LENGTH=222
Length = 221
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 87/176 (49%), Gaps = 16/176 (9%)
Query: 32 CRICQEEDLAKNLESPCACSGSLKYAHRECVQRWCNEKGDIICEICHVSYKPGYTAPPQ- 90
CRIC EE+ E+PC+CSG++K+AHR+C+QRWC+EKG+ ICEIC YKPGYT +
Sbjct: 20 CRICHEEEAESYFEAPCSCSGTIKFAHRDCIQRWCDEKGNTICEICLQEYKPGYTTTSKP 79
Query: 91 VHHDETTIEISSGDWSISGNRLDLHDPRILAMAAAQHRLL----EDEYDEYTATNNNAAA 146
ET + I R +LH R ++R L E ++ E + + A+
Sbjct: 80 SRFIETAVTI----------RDNLHIMRRENGRRRRNRRLVNREESDFQECNSGVDRGAS 129
Query: 147 FCRXXXXXXXXXXXXXXXXXXXXXDDEDDASAIFSLFLLRAAGFLLPCYIMAWAIS 202
CR +E + IF++ L+A G LLP ++ I+
Sbjct: 130 CCRYLALIFSVILLIKHAFDAVYGTEEYPYT-IFTVLTLKAIGILLPMLVIIRTIT 184
>AT4G34100.1 | chr4:16330590-16334864 FORWARD LENGTH=1109
Length = 1108
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 32 CRICQEEDLAKN-LESPCACSGSLKYAHRECVQRWCNEKGDIICEICH--VSYKPGY--T 86
CRIC+ A N L PCACSGS+K+ H++C+ +W N CE+C S+ P Y
Sbjct: 68 CRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSFSPVYADN 127
Query: 87 APPQVHHDETTIEIS 101
AP ++ E + I+
Sbjct: 128 APSRLPFQEFVVGIA 142
>AT4G32670.1 | chr4:15759527-15762847 REVERSE LENGTH=861
Length = 860
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 32 CRICQEEDLAKN-LESPCACSGSLKYAHRECVQRWCNEKGDIICEICHVSYK--PGYT-- 86
CRICQ + N L PCAC GSLKY H +C+ W N + CEIC SY P Y+
Sbjct: 33 CRICQSPEEPDNPLRHPCACRGSLKYIHSDCLFLWLNRRKRNHCEICKRSYSIVPVYSEN 92
Query: 87 APPQV 91
AP ++
Sbjct: 93 APERL 97
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.134 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,331,060
Number of extensions: 205174
Number of successful extensions: 466
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 455
Number of HSP's successfully gapped: 13
Length of query: 250
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 154
Effective length of database: 8,474,633
Effective search space: 1305093482
Effective search space used: 1305093482
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 110 (47.0 bits)