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Os02g0574600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.37 (0.0407) R2 : 0.668
β1 : -1.22 (0.148) R2dD : 0.0544 R2D : -0.0388
β2 : 1.11 (0.128) R2dC : 0.0855 R2C : 0.193
β3 : 1.91 (0.132) R2dE : 0.239 R2E : 0.313
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.44 (0.0868) R2dN8 : 0.27 R2N8 : 0.12
σ : 0.755
deviance : 262.49
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C
peak time of C : 8.21
E
wheather : precipitation
threshold : 0.4999
memory length : 269
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 2.83
open length of G : 2.85

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
260.54 0.758 7.36 -1.17 1.12 1.93 -0.696 1.19 -1.42 8.18 0.2221 259 2.92 2.95
262.63 0.755 7.36 -1.21 1.12 1.92 -0.235 -- -1.43 8.15 0.2828 261 2.88 2.9
261.62 0.753 7.36 -1.17 1.17 1.89 -- 0.975 -1.41 8.07 0.3413 261 2.93 2.85
262.49 0.755 7.37 -1.22 1.11 1.91 -- -- -1.44 8.21 0.4999 269 2.83 2.85
290.96 0.794 7.41 -1.23 -- 2.41 -- 0.586 -1.45 -- 0.4812 350 2.74 2.75
350.1 0.877 7.31 -1.2 2.4 -- 0.111 -- -1.3 7.01 -- -- -- --
350.13 0.876 7.31 -1.2 2.4 -- -- -- -1.3 7.01 -- -- -- --
291.86 0.796 7.4 -1.24 -- 2.38 -- -- -1.42 -- 0.4939 356 2.58 2.91
304.02 0.812 7.35 -- 1.14 1.88 -- -- -1.31 8.14 0.5 261 2.89 2.92
652.72 1.19 7.36 -1.15 -- -- -- -- -1.26 -- -- -- -- --
388.1 0.922 7.28 -- 2.39 -- -- -- -1.17 7.04 -- -- -- --
333.45 0.85 7.39 -- -- 2.36 -- -- -1.34 -- 0.499 357 2.57 2.92
687.72 1.22 7.33 -- -- -- -- -- -1.13 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 263.49 precipitation 0.1 270 < th dose independent rect. 3 3
2 263.49 precipitation 0.1 270 < th dose dependent rect. 3 3
5 265.29 wind 5.0 270 < th dose independent rect. 3 3
8 266.00 wind 9.0 270 < th dose independent rect. 6 21
18 267.84 temperature 10.0 90 > th dose dependent rect. 8 19
22 268.24 temperature 10.0 270 > th dose dependent rect. 19 7
23 268.42 atmosphere 1010.0 270 < th dose independent rect. 3 3
26 268.49 temperature 10.0 270 > th dose independent rect. 3 3
28 268.49 temperature 30.0 270 < th dose independent rect. 3 3
29 268.49 humidity 50.0 270 > th dose independent rect. 3 3
32 268.49 atmosphere 995.0 270 > th dose independent rect. 3 3
34 268.49 radiation 20.0 270 < th dose independent rect. 3 3
37 268.49 temperature 10.0 270 > th dose independent rect. 6 21
40 268.64 radiation 10.0 270 < th dose independent rect. 2 5
41 268.95 radiation 40.0 270 < th dose dependent rect. 3 3
47 269.40 temperature 10.0 10 > th dose dependent rect. 9 19
63 269.55 radiation 1.0 270 < th dose dependent rect. 3 2
85 269.79 radiation 40.0 270 < th dose dependent rect. 2 5
87 269.84 wind 9.0 90 < th dose independent rect. 9 18
112 270.79 precipitation 0.1 270 < th dose independent rect. 2 17
113 270.79 precipitation 0.1 270 < th dose dependent rect. 2 17
114 270.81 precipitation 0.1 270 < th dose independent rect. 15 15
115 270.81 precipitation 0.1 270 < th dose dependent rect. 15 15
117 271.09 temperature 20.0 270 > th dose independent rect. 6 8
122 271.24 wind 9.0 270 < th dose dependent rect. 3 3
138 271.87 precipitation 0.1 270 < th dose independent rect. 6 20
139 271.87 precipitation 0.1 270 < th dose dependent rect. 6 20
145 272.16 wind 1.0 270 > th dose independent rect. 2 4
146 272.17 wind 9.0 270 < th dose independent rect. 6 9
147 272.20 wind 9.0 90 < th dose dependent rect. 3 6
150 272.27 wind 1.0 270 > th dose independent rect. 1 6
161 272.62 temperature 10.0 90 > th dose independent rect. 9 18
172 273.54 temperature 10.0 270 > th dose dependent rect. 21 15
173 273.56 radiation 30.0 270 < th dose independent rect. 15 15
176 273.67 temperature 10.0 270 > th dose dependent rect. 6 8
177 273.68 atmosphere 1005.0 270 > th dose independent rect. 3 3
185 273.88 wind 1.0 270 > th dose independent rect. 7 19
186 273.90 precipitation 0.1 270 < th dose independent rect. 6 9
187 273.90 precipitation 0.1 270 < th dose dependent rect. 6 9
196 274.25 wind 1.0 270 > th dose independent rect. 3 1
198 274.32 atmosphere 1015.0 270 < th dose independent rect. 6 9
199 274.32 temperature 10.0 270 > th dose independent rect. 15 15
200 274.36 temperature 10.0 270 > th dose dependent rect. 3 3
201 274.36 atmosphere 995.0 270 > th dose dependent rect. 3 3
214 274.87 precipitation 0.1 270 < th dose independent rect. 19 7
215 274.87 precipitation 0.1 270 < th dose dependent rect. 19 7
218 275.25 humidity 60.0 270 > th dose independent rect. 19 7
230 275.35 temperature 10.0 270 > th dose independent rect. 19 7
231 275.35 temperature 30.0 270 < th dose independent rect. 19 7
233 275.35 atmosphere 995.0 270 > th dose independent rect. 19 7
234 275.35 radiation 1.0 270 < th dose independent rect. 19 7
239 275.35 temperature 10.0 270 > th dose independent rect. 2 17
240 275.35 atmosphere 1015.0 270 < th dose independent rect. 2 17
241 275.35 radiation 1.0 270 < th dose dependent rect. 19 7
253 275.62 wind 9.0 270 < th dose independent rect. 19 7
259 275.72 wind 9.0 270 < th dose independent rect. 15 15
261 275.79 atmosphere 995.0 270 > th dose independent rect. 6 9
262 275.88 precipitation 0.1 90 < th dose independent rect. 9 18
264 275.88 precipitation 0.1 90 < th dose dependent rect. 9 18
268 275.90 radiation 40.0 270 < th dose dependent rect. 1 8
296 276.86 precipitation 0.1 10 < th dose independent rect. 3 6
298 276.86 precipitation 0.1 10 < th dose dependent rect. 3 6
304 277.00 humidity 50.0 270 > th dose dependent rect. 3 2
306 277.07 wind 1.0 270 > th dose independent rect. 19 7
360 278.15 wind 9.0 10 < th dose independent rect. 9 19
386 278.49 wind 9.0 10 < th dose dependent rect. 4 5
402 278.79 atmosphere 1005.0 270 > th dose independent rect. 2 5
406 278.94 atmosphere 995.0 270 > th dose independent rect. 6 20
417 279.12 wind 9.0 270 < th dose independent rect. 2 17
418 279.14 atmosphere 995.0 270 > th dose independent rect. 2 17
438 279.48 atmosphere 1015.0 270 < th dose independent rect. 7 18
494 280.15 precipitation 0.1 10 < th dose independent rect. 9 18
496 280.15 precipitation 0.1 10 < th dose dependent rect. 9 18
525 280.28 atmosphere 995.0 270 > th dose independent rect. 15 15
527 280.28 temperature 30.0 270 < th dose dependent rect. 3 2
542 280.54 atmosphere 1015.0 270 < th dose independent rect. 6 20
543 280.56 atmosphere 1015.0 90 < th dose independent rect. 9 18
576 280.64 radiation 40.0 270 < th dose dependent rect. 15 15
582 280.70 radiation 20.0 10 < th dose independent rect. 4 5
637 281.29 humidity 50.0 90 > th dose dependent rect. 3 6
665 281.62 atmosphere 995.0 90 > th dose independent rect. 9 18
723 282.24 precipitation 0.1 270 < th dose independent rect. 1 20
724 282.24 precipitation 0.1 270 < th dose dependent rect. 1 20
749 282.39 wind 1.0 270 > th dose independent rect. 2 17
761 282.64 temperature 10.0 10 > th dose dependent rect. 22 6
806 282.93 temperature 30.0 90 < th dose dependent rect. 3 6
828 283.12 atmosphere 995.0 10 > th dose dependent rect. 4 5
857 283.42 humidity 50.0 270 > th dose independent rect. 7 19
868 283.58 wind 1.0 270 > th dose independent rect. 21 4
872 283.67 radiation 20.0 10 < th dose independent rect. 4 18
912 284.02 wind 9.0 270 < th dose dependent rect. 7 7
926 284.16 humidity 50.0 270 > th dose independent rect. 6 9
944 284.19 atmosphere 1015.0 270 < th dose independent rect. 19 7
982 284.66 radiation 1.0 270 < th dose dependent rect. 11 15
985 284.73 temperature 30.0 270 < th dose dependent rect. 2 4